Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene miRNA Gene ontology Other IDs Protein Pathways Associated diseases
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	56913
Gene name Gene Name - the full gene name approved by the HGNC.	Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	C1GALT1
Synonyms (NCBI Gene) Gene synonyms aliases	C1GALT, T-synthase
Chromosome Chromosome number	7
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	7p22.1-p21.3
Summary Summary of gene provided in NCBI Entrez Gene.	The protein encoded by this gene generates the common core 1 O-glycan structure, Gal-beta-1-3GalNAc-R, by the transfer of Gal from UDP-Gal to GalNAc-alpha-1-R. Core 1 is a precursor for many extended mucin-type O-glycans on cell surface and secreted glyco

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miRTarBase ID	miRNA	Experiments	Reference
MIRT019301	hsa-miR-148b-3p	Microarray	17612493
MIRT019740	hsa-miR-375	Microarray	20215506
MIRT027469	hsa-miR-98-5p	Microarray	19088304
MIRT052502	hsa-let-7a-5p	CLASH	23622248
MIRT052034	hsa-let-7b-5p	CLASH	23622248
MIRT688902	hsa-miR-548as-3p	HITS-CLIP	23313552
MIRT688901	hsa-miR-6732-3p	HITS-CLIP	23313552
MIRT688900	hsa-miR-10a-5p	HITS-CLIP	23313552
MIRT688899	hsa-miR-10b-5p	HITS-CLIP	23313552
MIRT688898	hsa-miR-4445-3p	HITS-CLIP	23313552
MIRT688897	hsa-miR-548al	HITS-CLIP	23313552
MIRT688896	hsa-miR-339-5p	HITS-CLIP	23313552
MIRT688895	hsa-miR-4421	HITS-CLIP	23313552
MIRT688894	hsa-miR-5699-3p	HITS-CLIP	23313552
MIRT688893	hsa-miR-3926	HITS-CLIP	23313552
MIRT688892	hsa-miR-4684-5p	HITS-CLIP	23313552
MIRT688891	hsa-miR-548s	HITS-CLIP	23313552
MIRT660023	hsa-miR-216b-5p	HITS-CLIP	23824327
MIRT660021	hsa-miR-8063	HITS-CLIP	23824327
MIRT660022	hsa-miR-3065-5p	HITS-CLIP	23824327
MIRT660020	hsa-miR-4742-5p	HITS-CLIP	23824327
MIRT660019	hsa-miR-130b-5p	HITS-CLIP	23824327
MIRT660017	hsa-miR-196a-3p	HITS-CLIP	23824327
MIRT660015	hsa-miR-4753-3p	HITS-CLIP	23824327
MIRT660023	hsa-miR-216b-5p	HITS-CLIP	23824327
MIRT660021	hsa-miR-8063	HITS-CLIP	23824327
MIRT660022	hsa-miR-3065-5p	HITS-CLIP	23824327
MIRT660020	hsa-miR-4742-5p	HITS-CLIP	23824327
MIRT660019	hsa-miR-130b-5p	HITS-CLIP	23824327
MIRT660018	hsa-miR-627-3p	HITS-CLIP	23824327
MIRT660017	hsa-miR-196a-3p	HITS-CLIP	23824327
MIRT660015	hsa-miR-4753-3p	HITS-CLIP	23824327
MIRT027469	hsa-miR-98-5p	Luciferase reporter assay, Western blotting, qRT-PCR	33935780
MIRT688902	hsa-miR-548as-3p	HITS-CLIP	23313552
MIRT688901	hsa-miR-6732-3p	HITS-CLIP	23313552
MIRT688900	hsa-miR-10a-5p	HITS-CLIP	23313552
MIRT688899	hsa-miR-10b-5p	HITS-CLIP	23313552
MIRT688898	hsa-miR-4445-3p	HITS-CLIP	23313552
MIRT688897	hsa-miR-548al	HITS-CLIP	23313552
MIRT688896	hsa-miR-339-5p	HITS-CLIP	23313552
MIRT688895	hsa-miR-4421	HITS-CLIP	23313552
MIRT688894	hsa-miR-5699-3p	HITS-CLIP	23313552
MIRT688893	hsa-miR-3926	HITS-CLIP	23313552
MIRT688892	hsa-miR-4684-5p	HITS-CLIP	23313552
MIRT688891	hsa-miR-548s	HITS-CLIP	23313552
MIRT660023	hsa-miR-216b-5p	HITS-CLIP	23824327
MIRT660021	hsa-miR-8063	HITS-CLIP	23824327
MIRT660022	hsa-miR-3065-5p	HITS-CLIP	23824327
MIRT660020	hsa-miR-4742-5p	HITS-CLIP	23824327
MIRT660019	hsa-miR-130b-5p	HITS-CLIP	23824327
MIRT660017	hsa-miR-196a-3p	HITS-CLIP	23824327
MIRT660015	hsa-miR-4753-3p	HITS-CLIP	23824327
MIRT660023	hsa-miR-216b-5p	HITS-CLIP	23824327
MIRT660021	hsa-miR-8063	HITS-CLIP	23824327
MIRT660022	hsa-miR-3065-5p	HITS-CLIP	23824327
MIRT660020	hsa-miR-4742-5p	HITS-CLIP	23824327
MIRT660019	hsa-miR-130b-5p	HITS-CLIP	23824327
MIRT660018	hsa-miR-627-3p	HITS-CLIP	23824327
MIRT660017	hsa-miR-196a-3p	HITS-CLIP	23824327
MIRT660015	hsa-miR-4753-3p	HITS-CLIP	23824327
MIRT839113	hsa-let-7a	CLIP-seq
MIRT839114	hsa-let-7b	CLIP-seq
MIRT839115	hsa-let-7c	CLIP-seq
MIRT839116	hsa-let-7d	CLIP-seq
MIRT839117	hsa-let-7e	CLIP-seq
MIRT839118	hsa-let-7f	CLIP-seq
MIRT839119	hsa-let-7g	CLIP-seq
MIRT839120	hsa-let-7i	CLIP-seq
MIRT839121	hsa-miR-1178	CLIP-seq
MIRT839122	hsa-miR-1273f	CLIP-seq
MIRT839123	hsa-miR-1293	CLIP-seq
MIRT839124	hsa-miR-1294	CLIP-seq
MIRT839125	hsa-miR-143	CLIP-seq
MIRT839126	hsa-miR-145	CLIP-seq
MIRT839127	hsa-miR-148a	CLIP-seq
MIRT839128	hsa-miR-148b	CLIP-seq
MIRT839129	hsa-miR-152	CLIP-seq
MIRT839130	hsa-miR-1825	CLIP-seq
MIRT839131	hsa-miR-1914	CLIP-seq
MIRT839132	hsa-miR-193a-3p	CLIP-seq
MIRT839133	hsa-miR-193b	CLIP-seq
MIRT839134	hsa-miR-196a	CLIP-seq
MIRT839135	hsa-miR-196b	CLIP-seq
MIRT839136	hsa-miR-199a-5p	CLIP-seq
MIRT839137	hsa-miR-199b-5p	CLIP-seq
MIRT839138	hsa-miR-202	CLIP-seq
MIRT839139	hsa-miR-2964a-3p	CLIP-seq
MIRT839140	hsa-miR-298	CLIP-seq
MIRT839141	hsa-miR-302f	CLIP-seq
MIRT839142	hsa-miR-3074-3p	CLIP-seq
MIRT839143	hsa-miR-3122	CLIP-seq
MIRT839144	hsa-miR-3140-3p	CLIP-seq
MIRT839145	hsa-miR-3165	CLIP-seq
MIRT839146	hsa-miR-3200-5p	CLIP-seq
MIRT839147	hsa-miR-3622a-3p	CLIP-seq
MIRT839148	hsa-miR-3622b-3p	CLIP-seq
MIRT839149	hsa-miR-3682-5p	CLIP-seq
MIRT839150	hsa-miR-377	CLIP-seq
MIRT839151	hsa-miR-3913-5p	CLIP-seq
MIRT839152	hsa-miR-3920	CLIP-seq
MIRT839153	hsa-miR-3921	CLIP-seq
MIRT839154	hsa-miR-3927	CLIP-seq
MIRT839155	hsa-miR-411	CLIP-seq
MIRT839156	hsa-miR-4251	CLIP-seq
MIRT839157	hsa-miR-4255	CLIP-seq
MIRT839158	hsa-miR-4274	CLIP-seq
MIRT839159	hsa-miR-4276	CLIP-seq
MIRT839160	hsa-miR-4282	CLIP-seq
MIRT839161	hsa-miR-4303	CLIP-seq
MIRT839162	hsa-miR-4305	CLIP-seq
MIRT839163	hsa-miR-4316	CLIP-seq
MIRT839164	hsa-miR-4326	CLIP-seq
MIRT839165	hsa-miR-4328	CLIP-seq
MIRT839166	hsa-miR-4329	CLIP-seq
MIRT839167	hsa-miR-4418	CLIP-seq
MIRT839168	hsa-miR-4433	CLIP-seq
MIRT839169	hsa-miR-4446-5p	CLIP-seq
MIRT839170	hsa-miR-4458	CLIP-seq
MIRT839171	hsa-miR-4459	CLIP-seq
MIRT839172	hsa-miR-4480	CLIP-seq
MIRT839173	hsa-miR-4483	CLIP-seq
MIRT839174	hsa-miR-4500	CLIP-seq
MIRT839175	hsa-miR-450b-3p	CLIP-seq
MIRT839176	hsa-miR-4519	CLIP-seq
MIRT839177	hsa-miR-4524	CLIP-seq
MIRT839178	hsa-miR-455-3p	CLIP-seq
MIRT839179	hsa-miR-4653-5p	CLIP-seq
MIRT839180	hsa-miR-4668-3p	CLIP-seq
MIRT839181	hsa-miR-4677-3p	CLIP-seq
MIRT839182	hsa-miR-4694-3p	CLIP-seq
MIRT839183	hsa-miR-4701-5p	CLIP-seq
MIRT839184	hsa-miR-4708-5p	CLIP-seq
MIRT839185	hsa-miR-4711-5p	CLIP-seq
MIRT839186	hsa-miR-4731-3p	CLIP-seq
MIRT839187	hsa-miR-4740-3p	CLIP-seq
MIRT839188	hsa-miR-4755-5p	CLIP-seq
MIRT839189	hsa-miR-4761-5p	CLIP-seq
MIRT839190	hsa-miR-4766-3p	CLIP-seq
MIRT839191	hsa-miR-4768-3p	CLIP-seq
MIRT839192	hsa-miR-4770	CLIP-seq
MIRT839193	hsa-miR-4775	CLIP-seq
MIRT839194	hsa-miR-4801	CLIP-seq
MIRT839195	hsa-miR-485-5p	CLIP-seq
MIRT839196	hsa-miR-487a	CLIP-seq
MIRT839197	hsa-miR-509-3-5p	CLIP-seq
MIRT839198	hsa-miR-509-5p	CLIP-seq
MIRT839199	hsa-miR-544b	CLIP-seq
MIRT839200	hsa-miR-548c-3p	CLIP-seq
MIRT839201	hsa-miR-548p	CLIP-seq
MIRT839202	hsa-miR-588	CLIP-seq
MIRT839203	hsa-miR-593	CLIP-seq
MIRT839204	hsa-miR-598	CLIP-seq
MIRT839205	hsa-miR-603	CLIP-seq
MIRT839206	hsa-miR-619	CLIP-seq
MIRT839207	hsa-miR-642a	CLIP-seq
MIRT839208	hsa-miR-769-3p	CLIP-seq
MIRT839209	hsa-miR-885-5p	CLIP-seq
MIRT839210	hsa-miR-892b	CLIP-seq
MIRT839211	hsa-miR-98	CLIP-seq
MIRT1948799	hsa-miR-1208	CLIP-seq
MIRT839123	hsa-miR-1293	CLIP-seq
MIRT1948800	hsa-miR-1298	CLIP-seq
MIRT1948801	hsa-miR-3117-5p	CLIP-seq
MIRT839145	hsa-miR-3165	CLIP-seq
MIRT1948802	hsa-miR-337-3p	CLIP-seq
MIRT1948803	hsa-miR-338-5p	CLIP-seq
MIRT1948804	hsa-miR-340	CLIP-seq
MIRT1948805	hsa-miR-345	CLIP-seq
MIRT1948806	hsa-miR-34b	CLIP-seq
MIRT1948807	hsa-miR-3591-3p	CLIP-seq
MIRT839147	hsa-miR-3622a-3p	CLIP-seq
MIRT839148	hsa-miR-3622b-3p	CLIP-seq
MIRT1948808	hsa-miR-371-5p	CLIP-seq
MIRT1948809	hsa-miR-371b-5p	CLIP-seq
MIRT1948810	hsa-miR-3922-5p	CLIP-seq
MIRT1948811	hsa-miR-3924	CLIP-seq
MIRT1948812	hsa-miR-4256	CLIP-seq
MIRT839159	hsa-miR-4276	CLIP-seq
MIRT839160	hsa-miR-4282	CLIP-seq
MIRT1948813	hsa-miR-4307	CLIP-seq
MIRT1948814	hsa-miR-4310	CLIP-seq
MIRT1948815	hsa-miR-4422	CLIP-seq
MIRT839168	hsa-miR-4433	CLIP-seq
MIRT839171	hsa-miR-4459	CLIP-seq
MIRT839172	hsa-miR-4480	CLIP-seq
MIRT839173	hsa-miR-4483	CLIP-seq
MIRT1948816	hsa-miR-4503	CLIP-seq
MIRT1948817	hsa-miR-4504	CLIP-seq
MIRT1948818	hsa-miR-4522	CLIP-seq
MIRT1948819	hsa-miR-4641	CLIP-seq
MIRT1948820	hsa-miR-4645-3p	CLIP-seq
MIRT1948821	hsa-miR-4661-5p	CLIP-seq
MIRT1948822	hsa-miR-4704-3p	CLIP-seq
MIRT1948823	hsa-miR-4729	CLIP-seq
MIRT1948824	hsa-miR-4733-3p	CLIP-seq
MIRT839189	hsa-miR-4761-5p	CLIP-seq
MIRT1948825	hsa-miR-4762-3p	CLIP-seq
MIRT839191	hsa-miR-4768-3p	CLIP-seq
MIRT839193	hsa-miR-4775	CLIP-seq
MIRT1948826	hsa-miR-4797-3p	CLIP-seq
MIRT1948827	hsa-miR-488	CLIP-seq
MIRT1948828	hsa-miR-494	CLIP-seq
MIRT1948829	hsa-miR-499a-5p	CLIP-seq
MIRT1948830	hsa-miR-513a-3p	CLIP-seq
MIRT1948831	hsa-miR-514	CLIP-seq
MIRT1948832	hsa-miR-514b-3p	CLIP-seq
MIRT1948833	hsa-miR-518d-5p	CLIP-seq
MIRT1948834	hsa-miR-519b-5p	CLIP-seq
MIRT1948835	hsa-miR-519c-5p	CLIP-seq
MIRT1948836	hsa-miR-520c-5p	CLIP-seq
MIRT1948837	hsa-miR-526a	CLIP-seq
MIRT1948838	hsa-miR-542-3p	CLIP-seq
MIRT1948839	hsa-miR-543	CLIP-seq
MIRT839199	hsa-miR-544b	CLIP-seq
MIRT839200	hsa-miR-548c-3p	CLIP-seq
MIRT1948840	hsa-miR-590-3p	CLIP-seq
MIRT1948841	hsa-miR-758	CLIP-seq
MIRT839113	hsa-let-7a	CLIP-seq
MIRT839114	hsa-let-7b	CLIP-seq
MIRT839115	hsa-let-7c	CLIP-seq
MIRT839116	hsa-let-7d	CLIP-seq
MIRT839117	hsa-let-7e	CLIP-seq
MIRT839118	hsa-let-7f	CLIP-seq
MIRT839119	hsa-let-7g	CLIP-seq
MIRT839120	hsa-let-7i	CLIP-seq
MIRT2186701	hsa-miR-1	CLIP-seq
MIRT2186702	hsa-miR-1183	CLIP-seq
MIRT2186703	hsa-miR-125a-3p	CLIP-seq
MIRT2186704	hsa-miR-1278	CLIP-seq
MIRT839123	hsa-miR-1293	CLIP-seq
MIRT839124	hsa-miR-1294	CLIP-seq
MIRT2186705	hsa-miR-1297	CLIP-seq
MIRT2186706	hsa-miR-140-3p	CLIP-seq
MIRT839127	hsa-miR-148a	CLIP-seq
MIRT839128	hsa-miR-148b	CLIP-seq
MIRT839129	hsa-miR-152	CLIP-seq
MIRT2186707	hsa-miR-155	CLIP-seq
MIRT839131	hsa-miR-1914	CLIP-seq
MIRT2186708	hsa-miR-1915	CLIP-seq
MIRT839134	hsa-miR-196a	CLIP-seq
MIRT839135	hsa-miR-196b	CLIP-seq
MIRT839138	hsa-miR-202	CLIP-seq
MIRT2186709	hsa-miR-203	CLIP-seq
MIRT2186710	hsa-miR-206	CLIP-seq
MIRT2186711	hsa-miR-26a	CLIP-seq
MIRT2186712	hsa-miR-26b	CLIP-seq
MIRT839140	hsa-miR-298	CLIP-seq
MIRT1948801	hsa-miR-3117-5p	CLIP-seq
MIRT2186713	hsa-miR-3121-3p	CLIP-seq
MIRT839143	hsa-miR-3122	CLIP-seq
MIRT2186714	hsa-miR-3147	CLIP-seq
MIRT2186715	hsa-miR-3163	CLIP-seq
MIRT839145	hsa-miR-3165	CLIP-seq
MIRT2186716	hsa-miR-3192	CLIP-seq
MIRT1948803	hsa-miR-338-5p	CLIP-seq
MIRT2186717	hsa-miR-3611	CLIP-seq
MIRT839147	hsa-miR-3622a-3p	CLIP-seq
MIRT839148	hsa-miR-3622b-3p	CLIP-seq
MIRT2186718	hsa-miR-3622b-5p	CLIP-seq
MIRT2186719	hsa-miR-3646	CLIP-seq
MIRT839149	hsa-miR-3682-5p	CLIP-seq
MIRT1948808	hsa-miR-371-5p	CLIP-seq
MIRT1948809	hsa-miR-371b-5p	CLIP-seq
MIRT839151	hsa-miR-3913-5p	CLIP-seq
MIRT839154	hsa-miR-3927	CLIP-seq
MIRT839159	hsa-miR-4276	CLIP-seq
MIRT1948814	hsa-miR-4310	CLIP-seq
MIRT839163	hsa-miR-4316	CLIP-seq
MIRT2186720	hsa-miR-4425	CLIP-seq
MIRT839168	hsa-miR-4433	CLIP-seq
MIRT839170	hsa-miR-4458	CLIP-seq
MIRT839171	hsa-miR-4459	CLIP-seq
MIRT2186721	hsa-miR-4465	CLIP-seq
MIRT839172	hsa-miR-4480	CLIP-seq
MIRT839173	hsa-miR-4483	CLIP-seq
MIRT839174	hsa-miR-4500	CLIP-seq
MIRT1948817	hsa-miR-4504	CLIP-seq
MIRT839175	hsa-miR-450b-3p	CLIP-seq
MIRT839178	hsa-miR-455-3p	CLIP-seq
MIRT2186722	hsa-miR-4637	CLIP-seq
MIRT1948821	hsa-miR-4661-5p	CLIP-seq
MIRT839180	hsa-miR-4668-3p	CLIP-seq
MIRT839181	hsa-miR-4677-3p	CLIP-seq
MIRT2186723	hsa-miR-4693-5p	CLIP-seq
MIRT2186724	hsa-miR-4697-3p	CLIP-seq
MIRT2186725	hsa-miR-4726-3p	CLIP-seq
MIRT1948823	hsa-miR-4729	CLIP-seq
MIRT2186726	hsa-miR-4744	CLIP-seq
MIRT839189	hsa-miR-4761-5p	CLIP-seq
MIRT839191	hsa-miR-4768-3p	CLIP-seq
MIRT2186727	hsa-miR-4789-3p	CLIP-seq
MIRT2186728	hsa-miR-4793-5p	CLIP-seq
MIRT1948826	hsa-miR-4797-3p	CLIP-seq
MIRT2186729	hsa-miR-4797-5p	CLIP-seq
MIRT1948839	hsa-miR-543	CLIP-seq
MIRT839199	hsa-miR-544b	CLIP-seq
MIRT839200	hsa-miR-548c-3p	CLIP-seq
MIRT2186730	hsa-miR-554	CLIP-seq
MIRT2186731	hsa-miR-556-3p	CLIP-seq
MIRT2186732	hsa-miR-570	CLIP-seq
MIRT839205	hsa-miR-603	CLIP-seq
MIRT2186733	hsa-miR-613	CLIP-seq
MIRT2186734	hsa-miR-656	CLIP-seq
MIRT2186735	hsa-miR-661	CLIP-seq
MIRT1948841	hsa-miR-758	CLIP-seq
MIRT2186736	hsa-miR-759	CLIP-seq
MIRT839208	hsa-miR-769-3p	CLIP-seq
MIRT2186737	hsa-miR-802	CLIP-seq
MIRT839209	hsa-miR-885-5p	CLIP-seq
MIRT839211	hsa-miR-98	CLIP-seq
MIRT2385100	hsa-miR-3688-3p	CLIP-seq
MIRT839159	hsa-miR-4276	CLIP-seq
MIRT2385101	hsa-miR-4477a	CLIP-seq
MIRT2186705	hsa-miR-1297	CLIP-seq
MIRT2186711	hsa-miR-26a	CLIP-seq
MIRT2186712	hsa-miR-26b	CLIP-seq
MIRT2426758	hsa-miR-323-3p	CLIP-seq
MIRT2426759	hsa-miR-410	CLIP-seq
MIRT2426760	hsa-miR-421	CLIP-seq
MIRT2426761	hsa-miR-4257	CLIP-seq
MIRT2186721	hsa-miR-4465	CLIP-seq
MIRT2426762	hsa-miR-4709-5p	CLIP-seq
MIRT839200	hsa-miR-548c-3p	CLIP-seq
MIRT2445317	hsa-miR-10a	CLIP-seq
MIRT2445318	hsa-miR-10b	CLIP-seq
MIRT2445319	hsa-miR-4517	CLIP-seq
MIRT839200	hsa-miR-548c-3p	CLIP-seq
MIRT2186732	hsa-miR-570	CLIP-seq
MIRT839203	hsa-miR-593	CLIP-seq
MIRT2445317	hsa-miR-10a	CLIP-seq
MIRT2445318	hsa-miR-10b	CLIP-seq
MIRT2445319	hsa-miR-4517	CLIP-seq
MIRT2490674	hsa-miR-548a-3p	CLIP-seq
MIRT839200	hsa-miR-548c-3p	CLIP-seq
MIRT2490675	hsa-miR-548e	CLIP-seq
MIRT2490676	hsa-miR-548f	CLIP-seq
MIRT2186732	hsa-miR-570	CLIP-seq
MIRT839203	hsa-miR-593	CLIP-seq
MIRT2445317	hsa-miR-10a	CLIP-seq
MIRT2445318	hsa-miR-10b	CLIP-seq
MIRT839143	hsa-miR-3122	CLIP-seq
MIRT839151	hsa-miR-3913-5p	CLIP-seq
MIRT839175	hsa-miR-450b-3p	CLIP-seq
MIRT2445319	hsa-miR-4517	CLIP-seq
MIRT2490674	hsa-miR-548a-3p	CLIP-seq
MIRT839200	hsa-miR-548c-3p	CLIP-seq
MIRT2490675	hsa-miR-548e	CLIP-seq
MIRT2490676	hsa-miR-548f	CLIP-seq
MIRT2186732	hsa-miR-570	CLIP-seq
MIRT839203	hsa-miR-593	CLIP-seq
MIRT839208	hsa-miR-769-3p	CLIP-seq

Show/Hide all(19)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000139	Component	Golgi membrane	TAS
GO:0000166	Function	Nucleotide binding	IEA
GO:0001525	Process	Angiogenesis	IEA
GO:0001525	Process	Angiogenesis	IEA
GO:0001525	Process	Angiogenesis	IMP	17228361
GO:0001822	Process	Kidney development	IMP	17228361
GO:0005515	Function	Protein binding	IPI	21496458
GO:0006486	Process	Protein glycosylation	IEA
GO:0006493	Process	Protein O-linked glycosylation	IEA
GO:0016020	Component	Membrane	IDA	11677243
GO:0016020	Component	Membrane	IEA
GO:0016263	Function	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity	IBA
GO:0016263	Function	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity	IDA	11677243
GO:0016263	Function	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity	IEA
GO:0016740	Function	Transferase activity	IEA
GO:0016757	Function	Glycosyltransferase activity	IEA
GO:0030154	Process	Cell differentiation	IEA
GO:0046872	Function	Metal ion binding	IEA
GO:0060576	Process	Intestinal epithelial cell development	IEA

MIM	HGNC	e!Ensembl
610555	24337	ENSG00000106392

Protein

UniProt ID

Q9NS00

Protein name

Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 (EC 2.4.1.122) (B3Gal-T8) (Core 1 O-glycan T-synthase) (Core 1 UDP-galactose:N-acetylgalactosamine-alpha-R beta 1,3-galactosyltransferase 1) (Beta-1,3-galactosyltransferase) (Core 1 beta1,3

Protein function

Glycosyltransferase that generates the core 1 O-glycan Gal-beta1-3GalNAc-alpha1-Ser/Thr (T antigen), which is a precursor for many extended O-glycans in glycoproteins (PubMed:11677243). Plays a central role in many processes, such as angiogenesi

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF02434	Fringe	84 → 272	Fringe-like	Family

Tissue specificity

TISSUE SPECIFICITY: Widely expressed. Highly expressed in kidney, heart, placenta and liver. {ECO:0000269|PubMed:11677243}.

Sequence

MASKSWLNFLTFLCGSAIGFLLCSQLFSILLGEKVDTQPNVLHNDPHARHSDDNGQNHLE
GQMNFNADSSQHKDENTDIAENLYQKVRILCWVMTGPQNLEKKAKHVKATWAQRCNKVLF
MSSEENKDFPAVGLKTKEGRDQLYWKTIKAFQYVHEHYLEDADWFLKADDDTYVILDNLR
WLLSKYDPEEPIYFGRRFKPYVKQGYMSGGAGYVLSKEALKRFVDAFKTDKCTHSSSIED
LALGRCMEIMNVEAGDSRDTIGKETFHPFVPEHHLIKGYLPRTFWYWNYNYYPPVEGPGC
CSDLAVSFHYVDSTTMYELEYLVYHLRPYGYLYRYQPTLPERILKEISQANKNEDTKVKL
GNP

Sequence length

363

Interactions

View interactions

	KEGG		Reactome
	Mucin type O-glycan biosynthesis Other types of O-glycan biosynthesis Metabolic pathways		Defective C1GALT1C1 causes Tn polyagglutination syndrome (TNPS) O-linked glycosylation of mucins

Show/Hide Unknown Diseases (7)

Disease merge term	Disease name	Evidence	References	Source
Unknown Includes: (1) ClinVar NON-pathogenic variants (Uncertain, Benign, Conflicting, VUS), (2) GenCC associations, (3) GWAS associations, (4) CBGDA evidence-based associations. NOTE: Diseases with pathogenic evidence are excluded to avoid conflicts.
Coronary artery disease	Coronary artery disease	N/A	N/A	GWAS
Dementia	Dementia	N/A	N/A	GWAS
Diabetes	Type 2 diabetes	N/A	N/A	GWAS
Hypertension	Hypertension (confirmatory factor analysis Factor 12), Hypertension	N/A	N/A	GWAS
Insomnia	Insomnia	N/A	N/A	GWAS
Metabolic Syndrome	Metabolic syndrome	N/A	N/A	GWAS
Myocardial Infarction	Myocardial infarction	N/A	N/A	GWAS

Show/Hide Text Mining Associations (24)

Disease Name	Relationship Type	References
Associations from Text Mining Disease associations identified through Pubtator
Bone Diseases	Associate	37040171
Brachydactyly type A1	Associate	28187132
Breast Neoplasms	Associate	37040171
Colitis	Associate	33040455
Colorectal Neoplasms	Associate	23536887, 29999571, 30035127, 30115016
Endometrial Neoplasms	Inhibit	36745330
Ermine phenotype	Associate	28187132
Fibroma Ossifying	Associate	34188021
Galactosemias	Associate	28209808, 32677771, 33593824
Glomerulonephritis IGA	Associate	17228361, 17315006, 19357720, 20959392, 26063800, 26125729, 28209808, 32945407, 33593824
Glomerulonephritis IGA	Inhibit	22362909, 35987175
Head and Neck Neoplasms	Associate	29930379
Heart Diseases	Inhibit	31633299
Hematologic Diseases	Associate	28187132
Inflammatory Bowel Diseases	Associate	37306210
Intestinal Diseases	Associate	37306210
Kidney Diseases	Associate	16238683
Leukodystrophy Hypomyelinating 4	Associate	37216524
Neoplasm Metastasis	Associate	30035127, 37040171
Neoplasms	Associate	20959392, 26063800, 28187132, 29930379, 29999571, 30035127, 30115016
Pancreatic Neoplasms	Associate	34675409
Pancreatitis	Associate	37306210
Squamous Cell Carcinoma of Head and Neck	Stimulate	29930379
Tn Syndrome	Associate	20959392

C1GALT1 (core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1)