Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
56704
Gene name Gene Name - the full gene name approved by the HGNC.
Junctophilin 1
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
JPH1
Synonyms (NCBI Gene) Gene synonyms aliases
CMT2K, CMYO25, JP-1, JP1
Disease Acronyms (UniProt) Disease acronyms from UniProt database
CMT2K, CMYO25
Chromosome Chromosome number
8
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
8q21.11
Summary Summary of gene provided in NCBI Entrez Gene.
Junctional complexes between the plasma membrane and endoplasmic/sarcoplasmic reticulum are a common feature of all excitable cell types and mediate cross talk between cell surface and intracellular ion channels. The protein encoded by this gene is a comp
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs201314759 C>G,T Risk-factor, benign Missense variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT025712 hsa-miR-7-5p Sequencing 20371350
MIRT030841 hsa-miR-21-5p Microarray 18591254
MIRT048673 hsa-miR-99a-5p CLASH 23622248
MIRT048572 hsa-miR-100-5p CLASH 23622248
MIRT718022 hsa-miR-6835-3p HITS-CLIP 19536157
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0003674 Function Molecular_function ND
GO:0005515 Function Protein binding IPI 32296183
GO:0005654 Component Nucleoplasm IDA
GO:0005789 Component Endoplasmic reticulum membrane IBA 21873635
GO:0005886 Component Plasma membrane IBA 21873635
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
605266 14201 ENSG00000104369
Protein
UniProt ID Q9HDC5
Protein name Junctophilin-1 (JP-1) (Junctophilin type 1)
Protein function Junctophilins contribute to the formation of junctional membrane complexes (JMCs) which link the plasma membrane with the endoplasmic or sarcoplasmic reticulum in excitable cells. Provides a structural foundation for functional cross-talk betwee
PDB 7RW4
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF02493 MORN 14 36 MORN repeat Repeat
PF02493 MORN 38 59 MORN repeat Repeat
PF02493 MORN 60 80 MORN repeat Repeat
PF02493 MORN 82 99 MORN repeat Repeat
PF02493 MORN 106 128 MORN repeat Repeat
PF02493 MORN 129 151 MORN repeat Repeat
PF02493 MORN 281 303 MORN repeat Repeat
PF02493 MORN 304 326 MORN repeat Repeat
Tissue specificity TISSUE SPECIFICITY: Abundantly expressed in skeletal muscle. Very low levels in heart. {ECO:0000269|PubMed:10891348}.
Sequence
MTGGRFDFDDGGTYCGGWEEGKAHGHGICTGPKGQGEYSGSWSHGFEVVGGYTWPSGNTY
QGYWAQGKRHGLGVETKGKW
MYRGEWSHGFKGRYGVRQSLCTPARYEGTWSNGLQDGYGV
ETYGDGGT
YQGQWAGGMRHGYGVRQSVPYGMATVIRSPLRTSLASLRSEQSNGSVLHDAA
AAADSPAGTRGGFVLNFHADAELAGKKKGGLFRRGSLLGSMKLRKSESKSSISSKRSSVR
SDAAMSRISSSDANSTISFGDVDCDFCPVEDHVDATTTETYMGEWKNDKRNGFGVSERSN
GMK
YEGEWANNKRHGYGCTVFPDGSKEEGKYKNNILVRGIRKQLIPIRHTKTREKVDRAI
EGAQRAAAMARTKVEIANSRTAHARAKADAADQAALAARQECDIARAVARELSPDFYQPG
PDYVKQRFQEGVDAKENPEEKVPEKPPTPKESPHFYRKGTTPPRSPEASPKHSHSPASSP
KPLKKQNPSSGARLNQDKRSVADEQVTAIVNKPLMSKAPTKEAGAVVPQSKYSGRHHIPN
PSNGELHSQYHGYYVKLNAPQHPPVDVEDGDGSSQSSSALVHKPSANKWSPSKSVTKPVA
KESKAEPKAKKSELAIPKNPASNDSCPALEKEANSGPNSIMIVLVMLLNIGLAILFVHFL
T
Sequence length 661
Interactions View interactions
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Charcot-marie-tooth disease CHARCOT-MARIE-TOOTH DISEASE, AXONAL, TYPE 2K rs137852739, rs137852737, rs118203972, rs118203974, rs267607183, rs267606878, rs121908287, rs1562648373, rs121908288, rs1368013631, rs28940291, rs28940292, rs28940293, rs28940294, rs28940295
View all (1137 more)
Narcolepsy Narcolepsy rs104894574, rs387906655 19629137
Unknown
Disease term Disease name Evidence References Source
Distal amyotrophy Distal amyotrophy ClinVar
Congenital myopathy congenital myopathy 25 GenCC
Uterine Fibroids Uterine Fibroids GWAS
Diabetes Diabetes GWAS
Associations from Text Mining
Disease Name Relationship Type References
Charcot Marie Tooth Disease Associate 26556829
Cholangiocarcinoma Associate 33725402