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Entrez ID
Entrez Gene ID - the GENE ID in NCBI Gene database.
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55750
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Gene name
Gene Name - the full gene name approved by the HGNC.
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Acylglycerol kinase |
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Gene symbol
Gene Symbol - the official gene symbol approved by the HGNC.
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AGK |
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Synonyms (NCBI Gene)
Gene synonyms aliases
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CATC5, CTRCT38, MTDPS10, MULK |
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Chromosome
Chromosome number
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7 |
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Chromosome location
Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
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7q34 |
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Summary
Summary of gene provided in NCBI Entrez Gene.
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The protein encoded by this gene is a mitochondrial membrane protein involved in lipid and glycerolipid metabolism. The encoded protein is a lipid kinase that catalyzes the formation of phosphatidic and lysophosphatidic acids. Defects in this gene have be |
| SNP ID |
Visualize variation |
Clinical significance |
Consequence |
|
rs35269563 |
A>G |
Conflicting-interpretations-of-pathogenicity |
Missense variant, coding sequence variant |
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rs142069429 |
C>T |
Conflicting-interpretations-of-pathogenicity, uncertain-significance |
Genic downstream transcript variant, coding sequence variant, missense variant |
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rs387907024 |
C>T |
Pathogenic |
Coding sequence variant, stop gained |
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rs387907025 |
C>T |
Pathogenic |
Coding sequence variant, stop gained |
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rs542547163 |
G>A |
Pathogenic |
Genic downstream transcript variant, intron variant |
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rs746709222 |
C>T |
Pathogenic |
Stop gained, coding sequence variant |
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rs765471424 |
T>C |
Pathogenic |
Splice donor variant |
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rs766413410 |
C>A,G,T |
Pathogenic |
Intron variant |
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rs771945804 |
C>A,G,T |
Pathogenic |
Coding sequence variant, synonymous variant, stop gained |
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rs777096695 |
G>A,T |
Pathogenic, likely-pathogenic |
Splice donor variant |
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rs863223895 |
G>A,C |
Pathogenic |
Initiator codon variant, missense variant |
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rs868431923 |
G>A,T |
Pathogenic |
Splice donor variant |
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rs886041491 |
A>G,T |
Pathogenic |
Genic downstream transcript variant, splice acceptor variant |
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rs886041835 |
G>T |
Pathogenic |
Splice acceptor variant |
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rs1554399572 |
T>C |
Pathogenic |
Splice donor variant |
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rs1554401640 |
A>G |
Pathogenic |
Splice acceptor variant |
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rs1554401641 |
T>G |
Pathogenic |
Coding sequence variant, stop gained |
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rs1587053244 |
G>A |
Likely-pathogenic |
Stop gained, coding sequence variant |
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rs1587162871 |
T>G |
Likely-pathogenic |
Splice donor variant |
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| UniProt ID |
Q53H12
|
| Protein name |
Acylglycerol kinase, mitochondrial (hAGK) (EC 2.7.1.107) (EC 2.7.1.138) (EC 2.7.1.94) (Multiple substrate lipid kinase) (HsMuLK) (MuLK) (Multi-substrate lipid kinase) |
| Protein function |
Lipid kinase that can phosphorylate both monoacylglycerol and diacylglycerol to form lysophosphatidic acid (LPA) and phosphatidic acid (PA), respectively (PubMed:15939762). Does not phosphorylate sphingosine (PubMed:15939762). Phosphorylates cer |
| PDB |
7CGP
|
| Family and domains |
Pfam
| Accession |
ID |
Position in sequence |
Description |
Type |
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PF00781
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DAGK_cat |
62 → 195 |
Diacylglycerol kinase catalytic domain |
Family |
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| Tissue specificity |
TISSUE SPECIFICITY: Highly expressed in muscle, heart, kidney and brain. {ECO:0000269|PubMed:15939762}. |
| Sequence |
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| Sequence length |
422 |
| Interactions |
View interactions
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Causal
Diseases caused by PATHOGENIC or LIKELY PATHOGENIC variants from ClinVar only
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| Disease merge term |
Disease name |
dbSNP ID |
References |
| sengers syndrome |
Sengers syndrome |
rs1587053244, rs771945804, rs1587162871, rs542547163, rs1228071168, rs746709222, rs766413410, rs1554399572, rs863223895, rs1554405935, rs777096695, rs868431923, rs1554401640, rs387907024, rs1554405947, rs1554401641, rs1587181981, rs387907025 View all (3 more) |
N/A |
| Trichohepatoenteric Syndrome |
trichohepatoenteric syndrome 1 |
rs746709222 |
N/A |
|
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Unknown
Includes: (1) ClinVar NON-pathogenic variants (Uncertain, Benign, Conflicting, VUS), (2) GenCC associations, (3) GWAS associations, (4) CBGDA evidence-based associations. NOTE: Diseases with pathogenic evidence are excluded to avoid conflicts.
|
| Disease merge term |
Disease name |
Evidence |
References |
Source |
| Cataract |
Developmental cataract, total early-onset cataract, cataract 38 |
N/A |
N/A |
ClinVar, GenCC |
| Mitochondrial Diseases |
mitochondrial disease |
N/A |
N/A |
GenCC |
| Psoriasis |
Psoriasis |
N/A |
N/A |
GWAS |
|
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Associations from Text Mining
Disease associations identified through Pubtator
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| Disease Name |
Relationship Type |
References |
| Acidosis Lactic |
Associate
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28712726, 33476211, 36253788 |
| Adenocarcinoma of Lung |
Associate
|
31747139 |
| Carcinoma Ovarian Epithelial |
Stimulate
|
35934718 |
| Carcinoma Renal Cell |
Associate
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31900208, 37009826 |
| Cardiomyopathies |
Associate
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22284826, 34948281 |
| Cardiomyopathy Hypertrophic |
Associate
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28712724, 28712726, 33120694, 33476211 |
| Cataract |
Associate
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22284826, 28712724, 28712726, 33120694, 33476211, 34948281, 36253788 |
| Cataract and cardiomyopathy |
Associate
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22284826, 28712724, 28712726, 33120694, 33476211, 34948281, 36253788, 39824030 |
| Death |
Associate
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34948281 |
| Dilatation Pathologic |
Associate
|
34948281 |
| Epiretinal Membrane |
Associate
|
22103573 |
| Fatigue |
Associate
|
39824030 |
| Fibrosarcoma |
Associate
|
31747139 |
| Lymphatic Metastasis |
Stimulate
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26443540 |
| Melanoma |
Associate
|
35871080 |
| Muscular Diseases |
Associate
|
28712724, 28712726, 33476211 |
| Myopia |
Associate
|
29346494 |
| Nasopharyngeal Carcinoma |
Stimulate
|
26443540 |
| Neoplasm Metastasis |
Associate
|
30657560, 31900208 |
| Neoplasms |
Associate
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19549252, 26443540, 26662108, 28712724, 31747139, 31900208 |
| Neoplasms Glandular and Epithelial |
Associate
|
19549252 |
| Neoplasms Squamous Cell |
Associate
|
26662108 |
| Ovarian Neoplasms |
Associate
|
35934718 |
| Prostatic Neoplasms |
Associate
|
19549252 |
| Squamous Cell Carcinoma of Head and Neck |
Associate
|
30657560 |
| Thyroid Cancer Papillary |
Associate
|
27037835 |
| Thyroid Neoplasms |
Associate
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27037835, 32737449 |
| Uterine Cervical Neoplasms |
Stimulate
|
26662108 |
| Vitreoretinopathy Proliferative |
Associate
|
22103573 |
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