Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
55644
Gene name Gene Name - the full gene name approved by the HGNC.
O-sialoglycoprotein endopeptidase
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
OSGEP
Synonyms (NCBI Gene) Gene synonyms aliases
GAMOS3, GCPL1, KAE1, OSGEP1, PRSMG1, TCS3
Disease Acronyms (UniProt) Disease acronyms from UniProt database
GAMOS3, TCS3
Chromosome Chromosome number
14
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
14q11.2
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs140076803 A>G Pathogenic Missense variant, coding sequence variant
rs140583554 C>T Likely-pathogenic Missense variant, coding sequence variant
rs144732839 C>A,G,T Pathogenic Coding sequence variant, missense variant
rs147548960 G>A Conflicting-interpretations-of-pathogenicity Coding sequence variant, missense variant
rs200347983 T>C Likely-pathogenic Coding sequence variant, missense variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT1206590 hsa-miR-1273e CLIP-seq
MIRT1206591 hsa-miR-1289 CLIP-seq
MIRT1206592 hsa-miR-1343 CLIP-seq
MIRT1206593 hsa-miR-137 CLIP-seq
MIRT1206594 hsa-miR-3170 CLIP-seq
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000408 Component EKC/KEOPS complex IBA 21873635
GO:0000408 Component EKC/KEOPS complex IDA 27903914, 28805828
GO:0002949 Process TRNA threonylcarbamoyladenosine modification IDA 28805828
GO:0005515 Function Protein binding IPI 23414517, 23455922, 27903914, 28514442, 32296183
GO:0005634 Component Nucleus IDA 27903914, 28805828
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
610107 18028 ENSG00000092094
Protein
UniProt ID Q9NPF4
Protein name tRNA N6-adenosine threonylcarbamoyltransferase (EC 2.3.1.234) (N6-L-threonylcarbamoyladenine synthase) (t(6)A synthase) (O-sialoglycoprotein endopeptidase) (hOSGEP) (t(6)A37 threonylcarbamoyladenosine biosynthesis protein OSGEP) (tRNA threonylcarbamoylade
Protein function Component of the EKC/KEOPS complex that is required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. The complex is probably involved in the transfer of the th
PDB 6GWJ
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00814 TsaD 23 301 tRNA N6-adenosine threonylcarbamoyltransferase Family
Tissue specificity TISSUE SPECIFICITY: Widely expressed at low level. Expressed in heart, placenta, liver, kidney, lung, brain, skeletal muscle and pancreas. {ECO:0000269|PubMed:12039036}.
Sequence
Sequence length 335
Interactions View interactions
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Developmental delay Global developmental delay rs28941770, rs199469464, rs281865469, rs143747297, rs398123009, rs587777428, rs786205133, rs606231459, rs797044854, rs797045027, rs864309504, rs878853160, rs886039902, rs886042046, rs886041291
View all (32 more)
Galloway-mowat syndrome Galloway Mowat syndrome, GALLOWAY-MOWAT SYNDROME 3, Galloway-Mowat syndrome rs727502863, rs727502864, rs730882216, rs797044992, rs767086146, rs754099015, rs797044993, rs797044994, rs797044995, rs863223396, rs869320712, rs776760122, rs1555976610, rs1557211306, rs1557211209
View all (22 more)
28805828, 28272532
Glomerulonephritis Glomerulonephritis rs778043831
Hypertension Hypertensive disease rs13306026
Unknown
Disease term Disease name Evidence References Source
Galloway-Mowat Syndrome Galloway-Mowat syndrome GenCC
Associations from Text Mining
Disease Name Relationship Type References
Acidosis Renal Tubular Associate 15252044, 27767102
Autosomal Recessive Primary Microcephaly Associate 30558655
Carcinoma Renal Cell Associate 35373928
Death Associate 30558655
Developmental Disabilities Associate 28272532
Galloway Mowat syndrome Associate 30558655, 33980730, 36856752
Heart Defects Congenital Associate 26033827
Hypokalemia Familial Associate 28272532
Lissencephaly Associate 30558655
Nephrosis congenital Associate 37845138