Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
55552
Gene name Gene Name - the full gene name approved by the HGNC.
Zinc finger protein 823
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
ZNF823
Synonyms (NCBI Gene) Gene synonyms aliases
HSZFP36
Chromosome Chromosome number
19
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
19p13.2
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT016394 hsa-miR-193b-3p Microarray 20304954
MIRT026425 hsa-miR-192-5p Microarray 19074876
MIRT1541339 hsa-let-7a CLIP-seq
MIRT1541340 hsa-let-7b CLIP-seq
MIRT1541341 hsa-let-7c CLIP-seq
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000977 Function RNA polymerase II transcription regulatory region sequence-specific DNA binding IBA 21873635
GO:0000981 Function DNA-binding transcription factor activity, RNA polymerase II-specific IBA 21873635
GO:0005634 Component Nucleus IBA 21873635
GO:0006357 Process Regulation of transcription by RNA polymerase II IBA 21873635
GO:0046872 Function Metal ion binding IEA
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
HGNC N/A HGNC
Protein
UniProt ID P16415
Protein name Zinc finger protein 823 (Zinc finger protein ZFP-36)
Protein function May be involved in transcriptional regulation.
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01352 KRAB 3 44 KRAB box Family
PF13912 zf-C2H2_6 164 188 Domain
PF00096 zf-C2H2 220 242 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 248 270 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 304 326 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 360 382 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 416 438 Zinc finger, C2H2 type Domain
PF13912 zf-C2H2_6 471 494 Domain
PF00096 zf-C2H2 499 521 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 555 577 Zinc finger, C2H2 type Domain
PF13912 zf-C2H2_6 582 608 Domain
Sequence
MDSVAFEDVAVNFTQEEWALLGPSQKSLYRNVMQETIRNLDCIEMKWEDQNIGDQCQNAK
RNLRSHTCEIKDDSQCGETFGQIPDSIVNKNTPRVNPCDSGECGEVVLGHSSLNCNIRVD
TGHKSCEHQEYGEKPYTHKQRGKAISHQHSFQTHERPPTGKKPFDCKECAKTFSSLGNLR
RHMAAHHG
DGPYKCKLCGKAFVWPSLFHLHERTHTGEKPYECKQCSKAFPFYSSYLRHER
IH
TGEKAYECKQCSKAFPDYSTYLRHERTHTGEKPYKCTQCGKAFSCYYYTRLHERTHTG
EQPYACKQCGKTFYHHTSFRRHMIRHTGDGPHKCKICGKGFDCPSSVRNHETTHTGEKPY
ECKQCGKVLSHSSSFRSHMITH
TGDGPQKCKICGKAFGCPSLFQRHERTHTGEKPYQCKQ
CGKAFSLAGSLRRHEATH
TGVKPYKCQCGKAFSDLSSFQNHETTHTGEKPYECKECGKAF
SCFKYLSQHKRTHT
VEKPYECKTCRKAFSHFSNLKVHERIHSGEKPYECKECGKAFSWLT
CLLRHERIHTGEKPYECLQCGKAFTRSRFLRGHEKTHTGEKLYECKECGKALSSLRSLHR
HKRTHWKD
TL
Sequence length 610
Interactions View interactions
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Hypercholesterolemia Hypercholesterolemia, Familial rs28942111, rs28942112, rs137852912, rs121908025, rs28942082, rs28942083, rs121908028, rs121908030, rs28942079, rs28942084, rs121908032, rs387906302, rs387906303, rs121908033, rs121908034
View all (1161 more)
22968135
Schizophrenia Schizophrenia rs13447324, rs387906932, rs387906933, rs863223354, rs863223355, rs776061422, rs863223349, rs748809996, rs759748655, rs863223353, rs863223350, rs863223356, rs781821239, rs863223348, rs863223346
View all (12 more)
28540026, 26198764, 31374203
Associations from Text Mining
Disease Name Relationship Type References
Periodontitis Associate 27302879