Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene miRNA Gene ontology Other IDs Protein Associated diseases
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	55552
Gene name Gene Name - the full gene name approved by the HGNC.	Zinc finger protein 823
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	ZNF823
Synonyms (NCBI Gene) Gene synonyms aliases	HSZFP36
Chromosome Chromosome number	19
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	19p13.2

Show/Hide all(137)

miRTarBase ID	miRNA	Experiments	Reference
MIRT016394	hsa-miR-193b-3p	Microarray	20304954
MIRT026425	hsa-miR-192-5p	Microarray	19074876
MIRT1541339	hsa-let-7a	CLIP-seq
MIRT1541340	hsa-let-7b	CLIP-seq
MIRT1541341	hsa-let-7c	CLIP-seq
MIRT1541342	hsa-let-7d	CLIP-seq
MIRT1541343	hsa-let-7e	CLIP-seq
MIRT1541344	hsa-let-7f	CLIP-seq
MIRT1541345	hsa-let-7g	CLIP-seq
MIRT1541346	hsa-let-7i	CLIP-seq
MIRT1541347	hsa-miR-1182	CLIP-seq
MIRT1541348	hsa-miR-143	CLIP-seq
MIRT1541349	hsa-miR-181a	CLIP-seq
MIRT1541350	hsa-miR-181b	CLIP-seq
MIRT1541351	hsa-miR-181c	CLIP-seq
MIRT1541352	hsa-miR-181d	CLIP-seq
MIRT1541353	hsa-miR-202	CLIP-seq
MIRT1541354	hsa-miR-3174	CLIP-seq
MIRT1541355	hsa-miR-3609	CLIP-seq
MIRT1541356	hsa-miR-3655	CLIP-seq
MIRT1541357	hsa-miR-376a	CLIP-seq
MIRT1541358	hsa-miR-376b	CLIP-seq
MIRT1541359	hsa-miR-376c	CLIP-seq
MIRT1541360	hsa-miR-3941	CLIP-seq
MIRT1541361	hsa-miR-4262	CLIP-seq
MIRT1541362	hsa-miR-433	CLIP-seq
MIRT1541363	hsa-miR-4458	CLIP-seq
MIRT1541364	hsa-miR-4500	CLIP-seq
MIRT1541365	hsa-miR-466	CLIP-seq
MIRT1541366	hsa-miR-4666-3p	CLIP-seq
MIRT1541367	hsa-miR-4672	CLIP-seq
MIRT1541368	hsa-miR-4678	CLIP-seq
MIRT1541369	hsa-miR-4684-5p	CLIP-seq
MIRT1541370	hsa-miR-4699-3p	CLIP-seq
MIRT1541371	hsa-miR-4716-5p	CLIP-seq
MIRT1541372	hsa-miR-4733-5p	CLIP-seq
MIRT1541373	hsa-miR-4738-3p	CLIP-seq
MIRT1541374	hsa-miR-4770	CLIP-seq
MIRT1541375	hsa-miR-515-5p	CLIP-seq
MIRT1541376	hsa-miR-518d-5p	CLIP-seq
MIRT1541377	hsa-miR-519b-5p	CLIP-seq
MIRT1541378	hsa-miR-519c-5p	CLIP-seq
MIRT1541379	hsa-miR-520c-5p	CLIP-seq
MIRT1541380	hsa-miR-520g	CLIP-seq
MIRT1541381	hsa-miR-520h	CLIP-seq
MIRT1541382	hsa-miR-526a	CLIP-seq
MIRT1541383	hsa-miR-548ah	CLIP-seq
MIRT1541384	hsa-miR-548n	CLIP-seq
MIRT1541385	hsa-miR-548t	CLIP-seq
MIRT1541386	hsa-miR-578	CLIP-seq
MIRT1541387	hsa-miR-606	CLIP-seq
MIRT1541388	hsa-miR-98	CLIP-seq
MIRT1541339	hsa-let-7a	CLIP-seq
MIRT1541340	hsa-let-7b	CLIP-seq
MIRT1541341	hsa-let-7c	CLIP-seq
MIRT1541342	hsa-let-7d	CLIP-seq
MIRT1541343	hsa-let-7e	CLIP-seq
MIRT1541344	hsa-let-7f	CLIP-seq
MIRT1541345	hsa-let-7g	CLIP-seq
MIRT1541346	hsa-let-7i	CLIP-seq
MIRT1541347	hsa-miR-1182	CLIP-seq
MIRT1541349	hsa-miR-181a	CLIP-seq
MIRT1541350	hsa-miR-181b	CLIP-seq
MIRT1541351	hsa-miR-181c	CLIP-seq
MIRT1541352	hsa-miR-181d	CLIP-seq
MIRT1541353	hsa-miR-202	CLIP-seq
MIRT1541354	hsa-miR-3174	CLIP-seq
MIRT1541355	hsa-miR-3609	CLIP-seq
MIRT1541357	hsa-miR-376a	CLIP-seq
MIRT1541358	hsa-miR-376b	CLIP-seq
MIRT1541359	hsa-miR-376c	CLIP-seq
MIRT1541361	hsa-miR-4262	CLIP-seq
MIRT1541363	hsa-miR-4458	CLIP-seq
MIRT1541364	hsa-miR-4500	CLIP-seq
MIRT1541366	hsa-miR-4666-3p	CLIP-seq
MIRT1541368	hsa-miR-4678	CLIP-seq
MIRT1541370	hsa-miR-4699-3p	CLIP-seq
MIRT1541371	hsa-miR-4716-5p	CLIP-seq
MIRT1541372	hsa-miR-4733-5p	CLIP-seq
MIRT1541375	hsa-miR-515-5p	CLIP-seq
MIRT1541380	hsa-miR-520g	CLIP-seq
MIRT1541381	hsa-miR-520h	CLIP-seq
MIRT1541383	hsa-miR-548ah	CLIP-seq
MIRT1541388	hsa-miR-98	CLIP-seq
MIRT1541347	hsa-miR-1182	CLIP-seq
MIRT2382564	hsa-miR-1243	CLIP-seq
MIRT2382565	hsa-miR-1278	CLIP-seq
MIRT2382566	hsa-miR-1287	CLIP-seq
MIRT2382567	hsa-miR-1290	CLIP-seq
MIRT2382568	hsa-miR-1303	CLIP-seq
MIRT1541348	hsa-miR-143	CLIP-seq
MIRT2382569	hsa-miR-144	CLIP-seq
MIRT1541349	hsa-miR-181a	CLIP-seq
MIRT1541350	hsa-miR-181b	CLIP-seq
MIRT1541351	hsa-miR-181c	CLIP-seq
MIRT1541352	hsa-miR-181d	CLIP-seq
MIRT2382570	hsa-miR-3135b	CLIP-seq
MIRT2382571	hsa-miR-3167	CLIP-seq
MIRT1541354	hsa-miR-3174	CLIP-seq
MIRT2382572	hsa-miR-331-3p	CLIP-seq
MIRT1541355	hsa-miR-3609	CLIP-seq
MIRT2382573	hsa-miR-3654	CLIP-seq
MIRT2382574	hsa-miR-3691-5p	CLIP-seq
MIRT1541357	hsa-miR-376a	CLIP-seq
MIRT1541358	hsa-miR-376b	CLIP-seq
MIRT1541359	hsa-miR-376c	CLIP-seq
MIRT1541360	hsa-miR-3941	CLIP-seq
MIRT2382575	hsa-miR-410	CLIP-seq
MIRT1541361	hsa-miR-4262	CLIP-seq
MIRT1541362	hsa-miR-433	CLIP-seq
MIRT2382576	hsa-miR-4642	CLIP-seq
MIRT1541365	hsa-miR-466	CLIP-seq
MIRT1541366	hsa-miR-4666-3p	CLIP-seq
MIRT1541367	hsa-miR-4672	CLIP-seq
MIRT1541369	hsa-miR-4684-5p	CLIP-seq
MIRT1541370	hsa-miR-4699-3p	CLIP-seq
MIRT1541371	hsa-miR-4716-5p	CLIP-seq
MIRT2382577	hsa-miR-4724-5p	CLIP-seq
MIRT1541372	hsa-miR-4733-5p	CLIP-seq
MIRT2382578	hsa-miR-4752	CLIP-seq
MIRT1541374	hsa-miR-4770	CLIP-seq
MIRT1541375	hsa-miR-515-5p	CLIP-seq
MIRT1541376	hsa-miR-518d-5p	CLIP-seq
MIRT1541377	hsa-miR-519b-5p	CLIP-seq
MIRT1541378	hsa-miR-519c-5p	CLIP-seq
MIRT1541379	hsa-miR-520c-5p	CLIP-seq
MIRT1541380	hsa-miR-520g	CLIP-seq
MIRT1541381	hsa-miR-520h	CLIP-seq
MIRT1541382	hsa-miR-526a	CLIP-seq
MIRT1541383	hsa-miR-548ah	CLIP-seq
MIRT2382579	hsa-miR-548k	CLIP-seq
MIRT1541384	hsa-miR-548n	CLIP-seq
MIRT1541385	hsa-miR-548t	CLIP-seq
MIRT2382580	hsa-miR-586	CLIP-seq
MIRT2382581	hsa-miR-7	CLIP-seq
MIRT2382582	hsa-miR-876-5p	CLIP-seq
MIRT2382583	hsa-miR-877	CLIP-seq

Show/Hide all(9)

GO ID	Ontology	Definition	Evidence
GO:0000977	Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	IBA
GO:0000981	Function	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0003677	Function	DNA binding	IEA
GO:0005634	Component	Nucleus	IBA
GO:0005634	Component	Nucleus	IEA
GO:0006355	Process	Regulation of DNA-templated transcription	IEA
GO:0006357	Process	Regulation of transcription by RNA polymerase II	IBA
GO:0008270	Function	Zinc ion binding	IEA
GO:0046872	Function	Metal ion binding	IEA

MIM	HGNC	e!Ensembl
HGNC	N/A	HGNC

Protein

UniProt ID

P16415

Protein name

Zinc finger protein 823 (Zinc finger protein ZFP-36)

Protein function

May be involved in transcriptional regulation.

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF01352	KRAB	3 → 44	KRAB box	Family
PF13912	zf-C2H2_6	164 → 188		Domain
PF00096	zf-C2H2	220 → 242	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	248 → 270	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	304 → 326	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	360 → 382	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	416 → 438	Zinc finger, C2H2 type	Domain
PF13912	zf-C2H2_6	471 → 494		Domain
PF00096	zf-C2H2	499 → 521	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	555 → 577	Zinc finger, C2H2 type	Domain
PF13912	zf-C2H2_6	582 → 608		Domain

Sequence

MDSVAFEDVAVNFTQEEWALLGPSQKSLYRNVMQETIRNLDCIEMKWEDQNIGDQCQNAK
RNLRSHTCEIKDDSQCGETFGQIPDSIVNKNTPRVNPCDSGECGEVVLGHSSLNCNIRVD
TGHKSCEHQEYGEKPYTHKQRGKAISHQHSFQTHERPPTGKKPFDCKECAKTFSSLGNLR
RHMAAHHGDGPYKCKLCGKAFVWPSLFHLHERTHTGEKPYECKQCSKAFPFYSSYLRHER
IHTGEKAYECKQCSKAFPDYSTYLRHERTHTGEKPYKCTQCGKAFSCYYYTRLHERTHTG
EQPYACKQCGKTFYHHTSFRRHMIRHTGDGPHKCKICGKGFDCPSSVRNHETTHTGEKPY
ECKQCGKVLSHSSSFRSHMITHTGDGPQKCKICGKAFGCPSLFQRHERTHTGEKPYQCKQ
CGKAFSLAGSLRRHEATHTGVKPYKCQCGKAFSDLSSFQNHETTHTGEKPYECKECGKAF
SCFKYLSQHKRTHTVEKPYECKTCRKAFSHFSNLKVHERIHSGEKPYECKECGKAFSWLT
CLLRHERIHTGEKPYECLQCGKAFTRSRFLRGHEKTHTGEKLYECKECGKALSSLRSLHR
HKRTHWKDTL

Sequence length

610

Interactions

View interactions

Show/Hide Unknown Diseases (1)

Disease merge term	Disease name	Evidence	References	Source
Unknown Includes: (1) ClinVar NON-pathogenic variants (Uncertain, Benign, Conflicting, VUS), (2) GenCC associations, (3) GWAS associations, (4) CBGDA evidence-based associations. NOTE: Diseases with pathogenic evidence are excluded to avoid conflicts.
Schizophrenia	Schizophrenia	N/A	N/A	GWAS

Show/Hide Text Mining Associations (1)

Disease Name	Relationship Type	References
Associations from Text Mining Disease associations identified through Pubtator
Periodontitis	Associate	27302879

ZNF823 (zinc finger protein 823)