Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
55521
Gene name Gene Name - the full gene name approved by the HGNC.
Tripartite motif containing 36
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
TRIM36
Synonyms (NCBI Gene) Gene synonyms aliases
ANPH, ANPH1, HAPRIN, RBCC728, RNF98
Disease Acronyms (UniProt) Disease acronyms from UniProt database
ANPH1
Chromosome Chromosome number
5
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
5q22.3
Summary Summary of gene provided in NCBI Entrez Gene.
The protein encoded by this gene is a member of the tripartite motif (TRIM) family. The TRIM motif includes three zinc-binding domains, a RING, a B-box type 1 and a B-box type 2, and a coiled-coil region. Multiple alternatively spliced transcript variants
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs773607884 G>T Pathogenic Coding sequence variant, non coding transcript variant, missense variant, genic downstream transcript variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT021589 hsa-miR-142-3p Microarray 17612493
MIRT021747 hsa-miR-132-3p Microarray 17612493
MIRT021969 hsa-miR-128-3p Microarray 17612493
MIRT028267 hsa-miR-32-5p Sequencing 20371350
MIRT050046 hsa-miR-26b-5p CLASH 23622248
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000209 Process Protein polyubiquitination TAS
GO:0000281 Process Mitotic cytokinesis IMP 28087737
GO:0001669 Component Acrosomal vesicle IEA
GO:0004842 Function Ubiquitin-protein transferase activity ISS
GO:0005515 Function Protein binding IPI 25416956, 32296183
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
609317 16280 ENSG00000152503
Protein
UniProt ID Q9NQ86
Protein name E3 ubiquitin-protein ligase TRIM36 (EC 2.3.2.27) (RING finger protein 98) (RING-type E3 ubiquitin transferase TRIM36) (Tripartite motif-containing protein 36) (Zinc-binding protein Rbcc728)
Protein function E3 ubiquitin-protein ligase which mediates ubiquitination and subsequent proteasomal degradation of target proteins. Involved in chromosome segregation and cell cycle regulation (PubMed:28087737). May play a role in the acrosome reaction and fer
PDB 7QS4
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF13445 zf-RING_UBOX 33 86 RING-type zinc-finger Domain
PF00643 zf-B_box 207 249 B-box zinc finger Domain
PF18568 COS 359 408 TRIM C-terminal subgroup One Signature domain Domain
PF00041 fn3 426 500 Fibronectin type III domain Domain
Tissue specificity TISSUE SPECIFICITY: Highly expressed in testis, prostate and brain (PubMed:15145053). Weakly expressed in kidney, lung and heart (PubMed:15145053). Expressed in fetal tissues (PubMed:28087737). {ECO:0000269|PubMed:15145053, ECO:0000269|PubMed:28087737}.
Sequence
MSESGEMSEFGYIMELIAKGKVTIKNIERELICPACKELFTHPLILPCQHSICHKCVKEL
LLTLDDSFNDVGSDNSNQSSPRLRLP
SPSMDKIDRINRPGWKRNSLTPRTTVFPCPGCEH
DVDLGERGINGLFRNFTLETIVERYRQAARAATAIMCDLCKPPPQESTKSCMDCSASYCN
ECFKIHHPWGTIKAQHEYVGPTTNFRPKILMCPEHETERINMYCELCRRPVCHLCKLGGN
HANHRVTTM
SSAYKTLKEKLSKDIDYLIGKESQVKSQISELNLLMKETECNGERAKEEAI
THFEKLFEVLEERKSSVLKAIDSSKKLRLDKFQTQMEEYQGLLENNGLVGYAQEVLKETD
QSCFVQTAKQLHLRIQKATESLKSFRPAAQTSFEDYVVNTSKQTELLG
ELSFFSSGIDVP
EINEEQSKVYNNALINWHHPEKDKADSYVLEYRKINRDDEMSWNEIEVCGTSKIIQDLEN
SSTYAFRVRAYKGSICSPCS
RELILHTPPAPVFSFLFDEKCGYNNEHLLLNLKRDRVESR
AGFNLLLAAERIQVGYYTSLDYIIGDTGITKGKHFWAFRVEPYSYLVKVGVASSDKLQEW
LRSPRDAVSPRYEQDSGHDSGSEDACFDSSQPFTLVTIGMQKFFIPKSPTSSNEPENRVL
PMPTSIGIFLDCDKGKVDFYDMDQMKCLYERQVDCSHTLYPAFALMGSGGIQLEEPITAK
YLEYQEDM
Sequence length 728
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    Antigen processing: Ubiquitination & Proteasome degradation
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Anencephaly Anencephaly rs773607884 28087737
Unknown
Disease term Disease name Evidence References Source
Epilepsy Epilepsy GWAS
Hypertension Hypertension GWAS
Uveal Melanoma Uveal Melanoma Furthermore, knocking-down GPS2 promoted the proliferation and metastatic abilities of UM cells both in vivo and in vitro. GWAS, CBGDA
Metabolic Syndrome Metabolic Syndrome GWAS
Associations from Text Mining
Disease Name Relationship Type References
Alzheimer Disease Associate 36035305
Cakut Associate 37499630
Carcinoma Non Small Cell Lung Inhibit 26599082
Carcinoma Renal Cell Associate 35529267
Colorectal Neoplasms Associate 37875418
Esophageal Neoplasms Associate 36588538
Neoplasms Inhibit 30238687, 32149111, 36799474
Neoplasms Associate 37875418
Ovarian Diseases Associate 25298284
Prostatic Neoplasms Associate 30238687, 38179769