Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene miRNA Gene ontology Other IDs Protein
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	55319
Gene name Gene Name - the full gene name approved by the HGNC.	Translation machinery associated 16 homolog
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	TMA16
Synonyms (NCBI Gene) Gene synonyms aliases	C4orf43
Chromosome Chromosome number	4
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	4q32.2

Show/Hide all(61)

miRTarBase ID	miRNA	Experiments	Reference
MIRT049795	hsa-miR-92a-3p	CLASH	23622248
MIRT093394	hsa-miR-4293	PAR-CLIP	21572407
MIRT540298	hsa-miR-101-5p	PAR-CLIP	21572407
MIRT093400	hsa-miR-892c-5p	PAR-CLIP	21572407
MIRT093398	hsa-miR-1245b-3p	PAR-CLIP	21572407
MIRT093401	hsa-miR-6849-3p	PAR-CLIP	21572407
MIRT540296	hsa-miR-1470	PAR-CLIP	21572407
MIRT540297	hsa-miR-4667-3p	PAR-CLIP	21572407
MIRT093396	hsa-miR-4469	PAR-CLIP	21572407
MIRT093402	hsa-miR-7106-3p	PAR-CLIP	21572407
MIRT093393	hsa-miR-137	PAR-CLIP	21572407
MIRT540295	hsa-miR-5100	PAR-CLIP	21572407
MIRT093403	hsa-miR-7977	PAR-CLIP	21572407
MIRT540294	hsa-miR-6772-3p	PAR-CLIP	21572407
MIRT093395	hsa-miR-3942-3p	PAR-CLIP	21572407
MIRT540293	hsa-miR-146a-3p	PAR-CLIP	21572407
MIRT093394	hsa-miR-4293	PAR-CLIP	21572407
MIRT540298	hsa-miR-101-5p	PAR-CLIP	21572407
MIRT093400	hsa-miR-892c-5p	PAR-CLIP	21572407
MIRT093398	hsa-miR-1245b-3p	PAR-CLIP	21572407
MIRT093401	hsa-miR-6849-3p	PAR-CLIP	21572407
MIRT540296	hsa-miR-1470	PAR-CLIP	21572407
MIRT540297	hsa-miR-4667-3p	PAR-CLIP	21572407
MIRT093396	hsa-miR-4469	PAR-CLIP	21572407
MIRT093402	hsa-miR-7106-3p	PAR-CLIP	21572407
MIRT093393	hsa-miR-137	PAR-CLIP	21572407
MIRT540295	hsa-miR-5100	PAR-CLIP	21572407
MIRT093403	hsa-miR-7977	PAR-CLIP	21572407
MIRT540294	hsa-miR-6772-3p	PAR-CLIP	21572407
MIRT093395	hsa-miR-3942-3p	PAR-CLIP	21572407
MIRT540293	hsa-miR-146a-3p	PAR-CLIP	21572407
MIRT093394	hsa-miR-4293	PAR-CLIP	21572407
MIRT540298	hsa-miR-101-5p	PAR-CLIP	21572407
MIRT093400	hsa-miR-892c-5p	PAR-CLIP	21572407
MIRT093398	hsa-miR-1245b-3p	PAR-CLIP	21572407
MIRT093401	hsa-miR-6849-3p	PAR-CLIP	21572407
MIRT540296	hsa-miR-1470	PAR-CLIP	21572407
MIRT540297	hsa-miR-4667-3p	PAR-CLIP	21572407
MIRT093396	hsa-miR-4469	PAR-CLIP	21572407
MIRT093402	hsa-miR-7106-3p	PAR-CLIP	21572407
MIRT093393	hsa-miR-137	PAR-CLIP	21572407
MIRT540295	hsa-miR-5100	PAR-CLIP	21572407
MIRT093403	hsa-miR-7977	PAR-CLIP	21572407
MIRT540294	hsa-miR-6772-3p	PAR-CLIP	21572407
MIRT093395	hsa-miR-3942-3p	PAR-CLIP	21572407
MIRT540293	hsa-miR-146a-3p	PAR-CLIP	21572407
MIRT093394	hsa-miR-4293	PAR-CLIP	21572407
MIRT540298	hsa-miR-101-5p	PAR-CLIP	21572407
MIRT093400	hsa-miR-892c-5p	PAR-CLIP	21572407
MIRT093398	hsa-miR-1245b-3p	PAR-CLIP	21572407
MIRT093401	hsa-miR-6849-3p	PAR-CLIP	21572407
MIRT540296	hsa-miR-1470	PAR-CLIP	21572407
MIRT540297	hsa-miR-4667-3p	PAR-CLIP	21572407
MIRT093396	hsa-miR-4469	PAR-CLIP	21572407
MIRT093402	hsa-miR-7106-3p	PAR-CLIP	21572407
MIRT093393	hsa-miR-137	PAR-CLIP	21572407
MIRT540295	hsa-miR-5100	PAR-CLIP	21572407
MIRT093403	hsa-miR-7977	PAR-CLIP	21572407
MIRT540294	hsa-miR-6772-3p	PAR-CLIP	21572407
MIRT093395	hsa-miR-3942-3p	PAR-CLIP	21572407
MIRT540293	hsa-miR-146a-3p	PAR-CLIP	21572407

Show/Hide all(9)

GO ID	Ontology	Definition	Evidence	Reference
GO:0005515	Function	Protein binding	IPI	25416956, 31515488, 32296183, 32814053
GO:0005634	Component	Nucleus	HDA	21630459
GO:0005634	Component	Nucleus	IBA
GO:0005634	Component	Nucleus	IEA
GO:0005654	Component	Nucleoplasm	IDA
GO:0005730	Component	Nucleolus	IDA
GO:0042254	Process	Ribosome biogenesis	IEA
GO:0042273	Process	Ribosomal large subunit biogenesis	IDA	32669547
GO:1990275	Function	Preribosome binding	IDA	32669547

MIM	HGNC	e!Ensembl
HGNC	N/A	HGNC

Protein

UniProt ID

Q96EY4

Protein name

Translation machinery-associated protein 16

Protein function

Involved in the biogenesis of the 60S ribosomal subunit in the nucleus.

PDB

6LSS , 6LU8 , 8FLA , 8FLB , 8FLC , 8IDT , 8IDY , 8INE , 8INF

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF11176	Tma16	13 → 163	Translation machinery-associated protein 16	Family

Sequence

MPKAPKGKSAGREKKVIHPYSRKAAQITREAHKQEKKEKLKNEKALRLNLVGEKLQWFQN
HLDPQKKRYSKKDACELIERYLNRFSSELEQIELHNSIRDRQGRRHCSRETVIKQTMERE
RQQFEGYGLEIPDILNASNLKTFREWDFDLKKLPNIKMRKICANDAIPKTCKRKTIITVD
QDLGELELNDESSDSDEEMTAVA

Sequence length

203

Interactions

View interactions

TMA16 (translation machinery associated 16 homolog)