Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
55237
Gene name Gene Name - the full gene name approved by the HGNC.
Vertebrae development associated
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
VRTN
Synonyms (NCBI Gene) Gene synonyms aliases
C14orf115, vertnin
Chromosome Chromosome number
14
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
14q24.3
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT2367290 hsa-miR-1245 CLIP-seq
MIRT2367291 hsa-miR-150 CLIP-seq
MIRT2367292 hsa-miR-1976 CLIP-seq
MIRT2367293 hsa-miR-3159 CLIP-seq
MIRT2367294 hsa-miR-4312 CLIP-seq
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000785 Component Chromatin IBA 21873635
GO:0004803 Function Transposase activity IEA
GO:0005515 Function Protein binding IPI 32296183
GO:0006313 Process Transposition, DNA-mediated IEA
GO:0006357 Process Regulation of transcription by RNA polymerase II IBA 21873635
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
620468 20223 ENSG00000133980
Protein
UniProt ID Q9H8Y1
Protein name Vertnin
Protein function Acts as a transcription factor that regulates development of thoracic vertebrae.
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01527 HTH_Tnp_1 269 322 Transposase Family
Sequence
MTSRNQLVQKVLQELQEAVECEGLEGLIGASLEAKQVLSSFTLPTCREGGPGLQVLEVDS
VALSLYPEDAPRNMLPLVCKGEGSLLFEAASMLLWGDAGLSLELRARTVVEMLLHRHYYL
QGMIDSKVMLQAVRYSLCSEESPEMTSLPPATLEAIFDADVKASCFPSSFSNVWHLYALA
SVLQRNIYSIYPMRNLKIRPYFNRVIRPRRCDHVPSTLHIMWAGQPLTSHFFRHQYFAPV
VGLEEVEAEGAPGVAPALPALAPLSSPAKTLELLNREPGLSYSHLCERYSVTKSTFYRWR
RQSQEHRQKVAARFSAKHFLQD
SFHRGGVVPLQQFLQRFPEISRSTYYAWKHELLGSGTC
PALPPREVLGMEELEKLPEEQVAEEELECSALAVSSPGMVLMQRAKLYLEHCISLNTLVP
YRCFKRRFPGISRSTYYNWRRKALRRNPSFKPAPALSAAGTPQLASVGEGAVIPWKSEAE
EGAGNATGEDPPAPGELLPLRMPLSRWQRRLRRAARRQVLSGHLPFCRFRLRYPSLSPSA
FWVWKSLARGWPRGLSKLQVPVPTLGKGGQEAEEKQEKEAGRDVTAVMAPPVGASSEDVE
GGPSREGALQEGATAQGQPHSGPLLSQPVVAAAGGRDGRMLVMDMIATTKFKAQAKLFLQ
KRFQSKSFPSYKEFSALFPLTARSTYYMWKRALYDGLTLVDG
Sequence length 702
Interactions View interactions
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Colorectal cancer Colorectal Carcinoma rs137854568, rs137854573, rs137854575, rs387906234, rs121908380, rs121908702, rs267606674, rs794729661, rs121909055, rs281865417, rs267606884, rs28934575, rs587776769, rs104893815, rs587776800
View all (467 more)
Unknown
Disease term Disease name Evidence References Source
Alzheimer disease Alzheimer disease GWAS
Associations from Text Mining
Disease Name Relationship Type References
Alzheimer Disease Associate 39177846