Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene miRNA Gene ontology Other IDs Protein Pathways Associated diseases
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	55183
Gene name Gene Name - the full gene name approved by the HGNC.	Replication timing regulatory factor 1
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	RIF1
Synonyms (NCBI Gene) Gene synonyms aliases	-
Chromosome Chromosome number	2
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	2q23.3
Summary Summary of gene provided in NCBI Entrez Gene.	This gene encodes a protein that shares homology with the yeast teleomere binding protein, Rap1 interacting factor 1. This protein localizes to aberrant telomeres may be involved in DNA repair. Alternate splicing results in multiple transcript variants. [

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miRTarBase ID	miRNA	Experiments	Reference
MIRT020847	hsa-miR-155-5p	Proteomics	18668040
MIRT027046	hsa-miR-103a-3p	Sequencing	20371350
MIRT031776	hsa-miR-16-5p	Proteomics	18668040
MIRT050377	hsa-miR-24-3p	CLASH	23622248
MIRT048790	hsa-miR-93-5p	CLASH	23622248
MIRT047132	hsa-miR-183-5p	CLASH	23622248
MIRT044974	hsa-miR-186-5p	CLASH	23622248
MIRT039429	hsa-miR-421	CLASH	23622248
MIRT634014	hsa-miR-4284	HITS-CLIP	23824327
MIRT050377	hsa-miR-24-3p	HITS-CLIP	23824327
MIRT634013	hsa-miR-342-5p	HITS-CLIP	23824327
MIRT634012	hsa-miR-4664-5p	HITS-CLIP	23824327
MIRT634011	hsa-miR-4651	HITS-CLIP	23824327
MIRT634010	hsa-miR-608	HITS-CLIP	23824327
MIRT634009	hsa-miR-6747-5p	HITS-CLIP	23824327
MIRT634008	hsa-miR-92a-2-5p	HITS-CLIP	23824327
MIRT634007	hsa-miR-6742-5p	HITS-CLIP	23824327
MIRT634006	hsa-miR-7977	HITS-CLIP	23824327
MIRT634005	hsa-miR-6737-5p	HITS-CLIP	23824327
MIRT634004	hsa-miR-6812-5p	HITS-CLIP	23824327
MIRT634003	hsa-miR-6819-5p	HITS-CLIP	23824327
MIRT634014	hsa-miR-4284	HITS-CLIP	23824327
MIRT050377	hsa-miR-24-3p	HITS-CLIP	23824327
MIRT634013	hsa-miR-342-5p	HITS-CLIP	23824327
MIRT634012	hsa-miR-4664-5p	HITS-CLIP	23824327
MIRT634011	hsa-miR-4651	HITS-CLIP	23824327
MIRT634010	hsa-miR-608	HITS-CLIP	23824327
MIRT634009	hsa-miR-6747-5p	HITS-CLIP	23824327
MIRT634008	hsa-miR-92a-2-5p	HITS-CLIP	23824327
MIRT634007	hsa-miR-6742-5p	HITS-CLIP	23824327
MIRT634006	hsa-miR-7977	HITS-CLIP	23824327
MIRT634005	hsa-miR-6737-5p	HITS-CLIP	23824327
MIRT634004	hsa-miR-6812-5p	HITS-CLIP	23824327
MIRT634003	hsa-miR-6819-5p	HITS-CLIP	23824327
MIRT614595	hsa-miR-4524a-3p	HITS-CLIP	23824327
MIRT614594	hsa-miR-4737	HITS-CLIP	23824327
MIRT614593	hsa-miR-450a-5p	HITS-CLIP	23824327
MIRT614592	hsa-miR-129-5p	HITS-CLIP	23824327
MIRT085758	hsa-miR-6507-5p	PAR-CLIP	20371350
MIRT085757	hsa-miR-5580-3p	PAR-CLIP	20371350
MIRT571431	hsa-miR-15a-5p	PAR-CLIP	20371350
MIRT571430	hsa-miR-15b-5p	PAR-CLIP	20371350
MIRT031776	hsa-miR-16-5p	PAR-CLIP	20371350
MIRT571429	hsa-miR-195-5p	PAR-CLIP	20371350
MIRT571428	hsa-miR-424-5p	PAR-CLIP	20371350
MIRT571427	hsa-miR-497-5p	PAR-CLIP	20371350
MIRT571426	hsa-miR-6838-5p	PAR-CLIP	20371350
MIRT571425	hsa-miR-503-5p	PAR-CLIP	20371350
MIRT571424	hsa-miR-646	PAR-CLIP	20371350
MIRT085755	hsa-miR-4524a-5p	PAR-CLIP	20371350
MIRT085756	hsa-miR-4524b-5p	PAR-CLIP	20371350
MIRT462029	hsa-miR-7-1-3p	PAR-CLIP	23592263
MIRT462028	hsa-miR-7-2-3p	PAR-CLIP	23592263
MIRT298929	hsa-miR-5583-3p	PAR-CLIP	23592263
MIRT462027	hsa-miR-6871-5p	PAR-CLIP	23592263
MIRT462026	hsa-miR-4742-5p	PAR-CLIP	23592263
MIRT462025	hsa-miR-4269	PAR-CLIP	23592263
MIRT462023	hsa-miR-6715b-5p	PAR-CLIP	23592263
MIRT462024	hsa-miR-4514	PAR-CLIP	23592263
MIRT462022	hsa-miR-4692	PAR-CLIP	23592263
MIRT462021	hsa-miR-935	PAR-CLIP	23592263
MIRT462020	hsa-miR-494-3p	PAR-CLIP	23592263
MIRT462019	hsa-miR-4747-5p	PAR-CLIP	23592263
MIRT462018	hsa-miR-5196-5p	PAR-CLIP	23592263
MIRT462017	hsa-miR-4697-3p	PAR-CLIP	23592263
MIRT462016	hsa-miR-223-3p	PAR-CLIP	23592263
MIRT634014	hsa-miR-4284	HITS-CLIP	23824327
MIRT050377	hsa-miR-24-3p	HITS-CLIP	23824327
MIRT634013	hsa-miR-342-5p	HITS-CLIP	23824327
MIRT634012	hsa-miR-4664-5p	HITS-CLIP	23824327
MIRT634011	hsa-miR-4651	HITS-CLIP	23824327
MIRT634010	hsa-miR-608	HITS-CLIP	23824327
MIRT634009	hsa-miR-6747-5p	HITS-CLIP	23824327
MIRT634008	hsa-miR-92a-2-5p	HITS-CLIP	23824327
MIRT634007	hsa-miR-6742-5p	HITS-CLIP	23824327
MIRT634006	hsa-miR-7977	HITS-CLIP	23824327
MIRT634005	hsa-miR-6737-5p	HITS-CLIP	23824327
MIRT634004	hsa-miR-6812-5p	HITS-CLIP	23824327
MIRT634003	hsa-miR-6819-5p	HITS-CLIP	23824327
MIRT634014	hsa-miR-4284	HITS-CLIP	23824327
MIRT050377	hsa-miR-24-3p	HITS-CLIP	23824327
MIRT634013	hsa-miR-342-5p	HITS-CLIP	23824327
MIRT634012	hsa-miR-4664-5p	HITS-CLIP	23824327
MIRT634011	hsa-miR-4651	HITS-CLIP	23824327
MIRT634010	hsa-miR-608	HITS-CLIP	23824327
MIRT634009	hsa-miR-6747-5p	HITS-CLIP	23824327
MIRT634008	hsa-miR-92a-2-5p	HITS-CLIP	23824327
MIRT634007	hsa-miR-6742-5p	HITS-CLIP	23824327
MIRT634006	hsa-miR-7977	HITS-CLIP	23824327
MIRT634005	hsa-miR-6737-5p	HITS-CLIP	23824327
MIRT634004	hsa-miR-6812-5p	HITS-CLIP	23824327
MIRT634003	hsa-miR-6819-5p	HITS-CLIP	23824327
MIRT614595	hsa-miR-4524a-3p	HITS-CLIP	23824327
MIRT614594	hsa-miR-4737	HITS-CLIP	23824327
MIRT614593	hsa-miR-450a-5p	HITS-CLIP	23824327
MIRT614592	hsa-miR-129-5p	HITS-CLIP	23824327
MIRT085758	hsa-miR-6507-5p	PAR-CLIP	20371350
MIRT085757	hsa-miR-5580-3p	PAR-CLIP	20371350
MIRT571431	hsa-miR-15a-5p	PAR-CLIP	20371350
MIRT571430	hsa-miR-15b-5p	PAR-CLIP	20371350
MIRT031776	hsa-miR-16-5p	PAR-CLIP	20371350
MIRT571429	hsa-miR-195-5p	PAR-CLIP	20371350
MIRT571428	hsa-miR-424-5p	PAR-CLIP	20371350
MIRT571427	hsa-miR-497-5p	PAR-CLIP	20371350
MIRT571426	hsa-miR-6838-5p	PAR-CLIP	20371350
MIRT571425	hsa-miR-503-5p	PAR-CLIP	20371350
MIRT571424	hsa-miR-646	PAR-CLIP	20371350
MIRT085755	hsa-miR-4524a-5p	PAR-CLIP	20371350
MIRT085756	hsa-miR-4524b-5p	PAR-CLIP	20371350
MIRT462029	hsa-miR-7-1-3p	PAR-CLIP	23592263
MIRT462028	hsa-miR-7-2-3p	PAR-CLIP	23592263
MIRT298929	hsa-miR-5583-3p	PAR-CLIP	23592263
MIRT462027	hsa-miR-6871-5p	PAR-CLIP	23592263
MIRT462026	hsa-miR-4742-5p	PAR-CLIP	23592263
MIRT462025	hsa-miR-4269	PAR-CLIP	23592263
MIRT462023	hsa-miR-6715b-5p	PAR-CLIP	23592263
MIRT462024	hsa-miR-4514	PAR-CLIP	23592263
MIRT462022	hsa-miR-4692	PAR-CLIP	23592263
MIRT462021	hsa-miR-935	PAR-CLIP	23592263
MIRT462020	hsa-miR-494-3p	PAR-CLIP	23592263
MIRT462019	hsa-miR-4747-5p	PAR-CLIP	23592263
MIRT462018	hsa-miR-5196-5p	PAR-CLIP	23592263
MIRT462017	hsa-miR-4697-3p	PAR-CLIP	23592263
MIRT462016	hsa-miR-223-3p	PAR-CLIP	23592263
MIRT755558	miR-940	Luciferase reporter assay, Western blotting, qRT-PCR	35769514
MIRT1306622	hsa-miR-101	CLIP-seq
MIRT1306623	hsa-miR-103a	CLIP-seq
MIRT1306624	hsa-miR-107	CLIP-seq
MIRT1306625	hsa-miR-1273d	CLIP-seq
MIRT1306626	hsa-miR-1283	CLIP-seq
MIRT1306627	hsa-miR-1284	CLIP-seq
MIRT1306628	hsa-miR-1301	CLIP-seq
MIRT1306629	hsa-miR-144	CLIP-seq
MIRT1306630	hsa-miR-1825	CLIP-seq
MIRT1306631	hsa-miR-1913	CLIP-seq
MIRT1306632	hsa-miR-199a-5p	CLIP-seq
MIRT1306633	hsa-miR-199b-5p	CLIP-seq
MIRT1306634	hsa-miR-298	CLIP-seq
MIRT1306635	hsa-miR-3140-3p	CLIP-seq
MIRT1306636	hsa-miR-3158-5p	CLIP-seq
MIRT1306637	hsa-miR-3163	CLIP-seq
MIRT1306638	hsa-miR-3189-5p	CLIP-seq
MIRT1306639	hsa-miR-320e	CLIP-seq
MIRT1306640	hsa-miR-324-3p	CLIP-seq
MIRT1306641	hsa-miR-3646	CLIP-seq
MIRT1306642	hsa-miR-3671	CLIP-seq
MIRT1306643	hsa-miR-3678-3p	CLIP-seq
MIRT1306644	hsa-miR-3691-3p	CLIP-seq
MIRT1306645	hsa-miR-3944-5p	CLIP-seq
MIRT1306646	hsa-miR-4328	CLIP-seq
MIRT1306647	hsa-miR-4477a	CLIP-seq
MIRT1306648	hsa-miR-455-5p	CLIP-seq
MIRT1306649	hsa-miR-4639-5p	CLIP-seq
MIRT1306650	hsa-miR-4641	CLIP-seq
MIRT1306651	hsa-miR-4659a-3p	CLIP-seq
MIRT1306652	hsa-miR-4659b-3p	CLIP-seq
MIRT1306653	hsa-miR-4660	CLIP-seq
MIRT1306654	hsa-miR-4668-3p	CLIP-seq
MIRT1306655	hsa-miR-4678	CLIP-seq
MIRT1306656	hsa-miR-4686	CLIP-seq
MIRT1306657	hsa-miR-4705	CLIP-seq
MIRT1306658	hsa-miR-4758-3p	CLIP-seq
MIRT1306659	hsa-miR-4796-5p	CLIP-seq
MIRT1306660	hsa-miR-5047	CLIP-seq
MIRT1306661	hsa-miR-513a-3p	CLIP-seq
MIRT1306662	hsa-miR-513b	CLIP-seq
MIRT1306663	hsa-miR-544	CLIP-seq
MIRT1306664	hsa-miR-548a-5p	CLIP-seq
MIRT1306665	hsa-miR-548ab	CLIP-seq
MIRT1306666	hsa-miR-548ac	CLIP-seq
MIRT1306667	hsa-miR-548ae	CLIP-seq
MIRT1306668	hsa-miR-548aj	CLIP-seq
MIRT1306669	hsa-miR-548ak	CLIP-seq
MIRT1306670	hsa-miR-548am	CLIP-seq
MIRT1306671	hsa-miR-548b-5p	CLIP-seq
MIRT1306672	hsa-miR-548c-5p	CLIP-seq
MIRT1306673	hsa-miR-548d-3p	CLIP-seq
MIRT1306674	hsa-miR-548d-5p	CLIP-seq
MIRT1306675	hsa-miR-548h	CLIP-seq
MIRT1306676	hsa-miR-548i	CLIP-seq
MIRT1306677	hsa-miR-548j	CLIP-seq
MIRT1306678	hsa-miR-548k	CLIP-seq
MIRT1306679	hsa-miR-548l	CLIP-seq
MIRT1306680	hsa-miR-548w	CLIP-seq
MIRT1306681	hsa-miR-548x	CLIP-seq
MIRT1306682	hsa-miR-548y	CLIP-seq
MIRT1306683	hsa-miR-548z	CLIP-seq
MIRT1306684	hsa-miR-559	CLIP-seq
MIRT1306685	hsa-miR-586	CLIP-seq
MIRT1306686	hsa-miR-590-3p	CLIP-seq
MIRT1306687	hsa-miR-607	CLIP-seq
MIRT1306688	hsa-miR-656	CLIP-seq
MIRT1306689	hsa-miR-767-3p	CLIP-seq
MIRT1306627	hsa-miR-1284	CLIP-seq
MIRT1306690	hsa-miR-15a	CLIP-seq
MIRT1306691	hsa-miR-15b	CLIP-seq
MIRT1306692	hsa-miR-16	CLIP-seq
MIRT1306693	hsa-miR-195	CLIP-seq
MIRT1306634	hsa-miR-298	CLIP-seq
MIRT1306636	hsa-miR-3158-5p	CLIP-seq
MIRT1306639	hsa-miR-320e	CLIP-seq
MIRT1306641	hsa-miR-3646	CLIP-seq
MIRT1306694	hsa-miR-3662	CLIP-seq
MIRT1306695	hsa-miR-424	CLIP-seq
MIRT1306696	hsa-miR-4524	CLIP-seq
MIRT1306655	hsa-miR-4678	CLIP-seq
MIRT1306659	hsa-miR-4796-5p	CLIP-seq
MIRT1306697	hsa-miR-497	CLIP-seq
MIRT1306698	hsa-miR-503	CLIP-seq
MIRT1306662	hsa-miR-513b	CLIP-seq
MIRT1306699	hsa-miR-548aa	CLIP-seq
MIRT1306666	hsa-miR-548ac	CLIP-seq
MIRT1306700	hsa-miR-548c-3p	CLIP-seq
MIRT1306673	hsa-miR-548d-3p	CLIP-seq
MIRT1306683	hsa-miR-548z	CLIP-seq
MIRT1306685	hsa-miR-586	CLIP-seq
MIRT1306688	hsa-miR-656	CLIP-seq
MIRT1306701	hsa-miR-223	CLIP-seq
MIRT1306637	hsa-miR-3163	CLIP-seq
MIRT1306702	hsa-miR-3185	CLIP-seq
MIRT1306703	hsa-miR-361-5p	CLIP-seq
MIRT1306641	hsa-miR-3646	CLIP-seq
MIRT1306642	hsa-miR-3671	CLIP-seq
MIRT1306704	hsa-miR-4277	CLIP-seq
MIRT1306705	hsa-miR-4291	CLIP-seq
MIRT1306649	hsa-miR-4639-5p	CLIP-seq
MIRT1306654	hsa-miR-4668-3p	CLIP-seq
MIRT1306706	hsa-miR-545	CLIP-seq
MIRT1306707	hsa-miR-548p	CLIP-seq
MIRT1306687	hsa-miR-607	CLIP-seq
MIRT2090872	hsa-miR-1208	CLIP-seq
MIRT2090873	hsa-miR-1226	CLIP-seq
MIRT2090874	hsa-miR-1236	CLIP-seq
MIRT2090875	hsa-miR-124	CLIP-seq
MIRT1306625	hsa-miR-1273d	CLIP-seq
MIRT2090876	hsa-miR-197	CLIP-seq
MIRT2090877	hsa-miR-203	CLIP-seq
MIRT2090878	hsa-miR-205	CLIP-seq
MIRT2090879	hsa-miR-218	CLIP-seq
MIRT2090880	hsa-miR-224	CLIP-seq
MIRT2090881	hsa-miR-23a	CLIP-seq
MIRT2090882	hsa-miR-23b	CLIP-seq
MIRT2090883	hsa-miR-23c	CLIP-seq
MIRT1306634	hsa-miR-298	CLIP-seq
MIRT2090884	hsa-miR-3127-5p	CLIP-seq
MIRT1306636	hsa-miR-3158-5p	CLIP-seq
MIRT2090885	hsa-miR-3160-5p	CLIP-seq
MIRT1306639	hsa-miR-320e	CLIP-seq
MIRT1306641	hsa-miR-3646	CLIP-seq
MIRT2090886	hsa-miR-3653	CLIP-seq
MIRT2090887	hsa-miR-3658	CLIP-seq
MIRT1306642	hsa-miR-3671	CLIP-seq
MIRT2090888	hsa-miR-3714	CLIP-seq
MIRT2090889	hsa-miR-3910	CLIP-seq
MIRT2090890	hsa-miR-3923	CLIP-seq
MIRT2090891	hsa-miR-4264	CLIP-seq
MIRT2090892	hsa-miR-4477b	CLIP-seq
MIRT2090893	hsa-miR-450b-5p	CLIP-seq
MIRT2090894	hsa-miR-4637	CLIP-seq
MIRT2090895	hsa-miR-4666-5p	CLIP-seq
MIRT1306655	hsa-miR-4678	CLIP-seq
MIRT2090896	hsa-miR-4724-5p	CLIP-seq
MIRT2090897	hsa-miR-4733-3p	CLIP-seq
MIRT2090898	hsa-miR-4738-3p	CLIP-seq
MIRT2090899	hsa-miR-4778-3p	CLIP-seq
MIRT2090900	hsa-miR-4795-3p	CLIP-seq
MIRT2090901	hsa-miR-4797-3p	CLIP-seq
MIRT2090902	hsa-miR-4797-5p	CLIP-seq
MIRT2090903	hsa-miR-495	CLIP-seq
MIRT2090904	hsa-miR-506	CLIP-seq
MIRT2090905	hsa-miR-5096	CLIP-seq
MIRT1306661	hsa-miR-513a-3p	CLIP-seq
MIRT1306662	hsa-miR-513b	CLIP-seq
MIRT2090906	hsa-miR-518a-5p	CLIP-seq
MIRT2090907	hsa-miR-520d-5p	CLIP-seq
MIRT2090908	hsa-miR-524-5p	CLIP-seq
MIRT2090909	hsa-miR-527	CLIP-seq
MIRT1306666	hsa-miR-548ac	CLIP-seq
MIRT1306673	hsa-miR-548d-3p	CLIP-seq
MIRT1306683	hsa-miR-548z	CLIP-seq
MIRT1306687	hsa-miR-607	CLIP-seq
MIRT2090910	hsa-miR-664	CLIP-seq
MIRT1306622	hsa-miR-101	CLIP-seq
MIRT2090872	hsa-miR-1208	CLIP-seq
MIRT2090873	hsa-miR-1226	CLIP-seq
MIRT2090874	hsa-miR-1236	CLIP-seq
MIRT1306629	hsa-miR-144	CLIP-seq
MIRT2315513	hsa-miR-1910	CLIP-seq
MIRT2090876	hsa-miR-197	CLIP-seq
MIRT2090877	hsa-miR-203	CLIP-seq
MIRT2090878	hsa-miR-205	CLIP-seq
MIRT2090879	hsa-miR-218	CLIP-seq
MIRT2090880	hsa-miR-224	CLIP-seq
MIRT2090881	hsa-miR-23a	CLIP-seq
MIRT2090882	hsa-miR-23b	CLIP-seq
MIRT2090883	hsa-miR-23c	CLIP-seq
MIRT2315514	hsa-miR-3065-5p	CLIP-seq
MIRT2090884	hsa-miR-3127-5p	CLIP-seq
MIRT2315515	hsa-miR-3145-3p	CLIP-seq
MIRT2090885	hsa-miR-3160-5p	CLIP-seq
MIRT2315516	hsa-miR-3177-3p	CLIP-seq
MIRT2315517	hsa-miR-33a	CLIP-seq
MIRT2315518	hsa-miR-33b	CLIP-seq
MIRT1306641	hsa-miR-3646	CLIP-seq
MIRT2090886	hsa-miR-3653	CLIP-seq
MIRT2090887	hsa-miR-3658	CLIP-seq
MIRT1306694	hsa-miR-3662	CLIP-seq
MIRT1306642	hsa-miR-3671	CLIP-seq
MIRT1306643	hsa-miR-3678-3p	CLIP-seq
MIRT1306644	hsa-miR-3691-3p	CLIP-seq
MIRT2315519	hsa-miR-382	CLIP-seq
MIRT2090890	hsa-miR-3923	CLIP-seq
MIRT2315520	hsa-miR-3942-3p	CLIP-seq
MIRT2090891	hsa-miR-4264	CLIP-seq
MIRT1306646	hsa-miR-4328	CLIP-seq
MIRT2315521	hsa-miR-4422	CLIP-seq
MIRT2090892	hsa-miR-4477b	CLIP-seq
MIRT2090893	hsa-miR-450b-5p	CLIP-seq
MIRT2315522	hsa-miR-452	CLIP-seq
MIRT2315523	hsa-miR-455-3p	CLIP-seq
MIRT2090894	hsa-miR-4637	CLIP-seq
MIRT1306649	hsa-miR-4639-5p	CLIP-seq
MIRT1306651	hsa-miR-4659a-3p	CLIP-seq
MIRT1306652	hsa-miR-4659b-3p	CLIP-seq
MIRT2315524	hsa-miR-4662a-3p	CLIP-seq
MIRT2090895	hsa-miR-4666-5p	CLIP-seq
MIRT2315525	hsa-miR-4676-3p	CLIP-seq
MIRT2315526	hsa-miR-4693-5p	CLIP-seq
MIRT2315527	hsa-miR-4704-3p	CLIP-seq
MIRT2090897	hsa-miR-4733-3p	CLIP-seq
MIRT2090898	hsa-miR-4738-3p	CLIP-seq
MIRT2090899	hsa-miR-4778-3p	CLIP-seq
MIRT2090900	hsa-miR-4795-3p	CLIP-seq
MIRT2090901	hsa-miR-4797-3p	CLIP-seq
MIRT2315528	hsa-miR-489	CLIP-seq
MIRT2315529	hsa-miR-494	CLIP-seq
MIRT2090903	hsa-miR-495	CLIP-seq
MIRT2315530	hsa-miR-501-3p	CLIP-seq
MIRT2315531	hsa-miR-502-3p	CLIP-seq
MIRT2090905	hsa-miR-5096	CLIP-seq
MIRT1306661	hsa-miR-513a-3p	CLIP-seq
MIRT2090906	hsa-miR-518a-5p	CLIP-seq
MIRT2090907	hsa-miR-520d-5p	CLIP-seq
MIRT2090908	hsa-miR-524-5p	CLIP-seq
MIRT2090909	hsa-miR-527	CLIP-seq
MIRT1306663	hsa-miR-544	CLIP-seq
MIRT1306706	hsa-miR-545	CLIP-seq
MIRT1306666	hsa-miR-548ac	CLIP-seq
MIRT1306667	hsa-miR-548ae	CLIP-seq
MIRT1306668	hsa-miR-548aj	CLIP-seq
MIRT1306670	hsa-miR-548am	CLIP-seq
MIRT1306700	hsa-miR-548c-3p	CLIP-seq
MIRT1306673	hsa-miR-548d-3p	CLIP-seq
MIRT1306681	hsa-miR-548x	CLIP-seq
MIRT1306683	hsa-miR-548z	CLIP-seq
MIRT2315532	hsa-miR-579	CLIP-seq
MIRT1306687	hsa-miR-607	CLIP-seq
MIRT2315533	hsa-miR-629	CLIP-seq
MIRT1306688	hsa-miR-656	CLIP-seq
MIRT2315534	hsa-miR-889	CLIP-seq
MIRT2393755	hsa-miR-3124-3p	CLIP-seq
MIRT2393756	hsa-miR-3173-3p	CLIP-seq
MIRT2393757	hsa-miR-3612	CLIP-seq
MIRT2090886	hsa-miR-3653	CLIP-seq
MIRT2090887	hsa-miR-3658	CLIP-seq
MIRT2393758	hsa-miR-4428	CLIP-seq
MIRT2090892	hsa-miR-4477b	CLIP-seq
MIRT2393759	hsa-miR-4695-5p	CLIP-seq
MIRT2393760	hsa-miR-650	CLIP-seq
MIRT2393755	hsa-miR-3124-3p	CLIP-seq
MIRT2393756	hsa-miR-3173-3p	CLIP-seq
MIRT2090886	hsa-miR-3653	CLIP-seq
MIRT2090887	hsa-miR-3658	CLIP-seq
MIRT2393758	hsa-miR-4428	CLIP-seq
MIRT2090892	hsa-miR-4477b	CLIP-seq
MIRT2090894	hsa-miR-4637	CLIP-seq
MIRT2090898	hsa-miR-4738-3p	CLIP-seq

Show/Hide all(29)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000122	Process	Negative regulation of transcription by RNA polymerase II	ISS
GO:0000723	Process	Telomere maintenance	IBA	21873635
GO:0000723	Process	Telomere maintenance	ISS
GO:0000781	Component	Chromosome, telomeric region	IEA
GO:0000785	Component	Chromatin	ISS
GO:0000793	Component	Condensed chromosome	IDA	15583028
GO:0001939	Component	Female pronucleus	IEA
GO:0001940	Component	Male pronucleus	IEA
GO:0005515	Function	Protein binding	IPI	22321011, 23333306, 27173435, 28241136, 28330616, 29203878, 29789392
GO:0005634	Component	Nucleus	IBA	21873635
GO:0005654	Component	Nucleoplasm	IDA
GO:0005654	Component	Nucleoplasm	TAS
GO:0005737	Component	Cytoplasm	IEA
GO:0005886	Component	Plasma membrane	IDA
GO:0006303	Process	Double-strand break repair via nonhomologous end joining	TAS
GO:0006348	Process	Chromatin silencing at telomere	ISS
GO:0006974	Process	Cellular response to DNA damage stimulus	IDA	28241136
GO:0007049	Process	Cell cycle	IEA
GO:0016604	Component	Nuclear body	IDA
GO:0019827	Process	Stem cell population maintenance	IEA
GO:0031965	Component	Nuclear membrane	IDA
GO:0035861	Component	Site of double-strand break	IDA	28241136
GO:0043247	Process	Telomere maintenance in response to DNA damage	IDA	15583028
GO:0045830	Process	Positive regulation of isotype switching	ISS
GO:0051233	Component	Spindle midzone	IDA	15583028
GO:0051574	Process	Positive regulation of histone H3-K9 methylation	ISS
GO:1990830	Process	Cellular response to leukemia inhibitory factor	IEA
GO:2000042	Process	Negative regulation of double-strand break repair via homologous recombination	IDA	23333306
GO:2001034	Process	Positive regulation of double-strand break repair via nonhomologous end joining	IDA	28241136

MIM	HGNC	e!Ensembl
608952	23207	ENSG00000080345

Protein

UniProt ID

Q5UIP0

Protein name

Telomere-associated protein RIF1 (Rap1-interacting factor 1 homolog)

Protein function

Key regulator of TP53BP1 that plays a key role in the repair of double-strand DNA breaks (DSBs) in response to DNA damage: acts by promoting non-homologous end joining (NHEJ)-mediated repair of DSBs (PubMed:15342490, PubMed:28241136). In respons

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF12231	Rif1_N	19 → 361	Rap1-interacting factor 1 N terminal	Family

Tissue specificity

TISSUE SPECIFICITY: Highly expressed in testis. {ECO:0000269|PubMed:15583028}.

Sequence

MTARGQSPLAPLLETLEDPSASHGGQTDAYLTLTSRMTGEEGKEVITEIEKKLPRLYKVL
KTHISSQNSELSSAALQALGFCLYNPKITSELSEANALELLSKLNDTIKNSDKNVRTRAL
WVISKQTFPSEVVGKMVSSIIDSLEILFNKGETHSAVVDFEALNVIVRLIEQAPIQMGEE
AVRWAKLVIPLVVHSAQKVHLRGATALEMGMPLLLQKQQEIASITEQLMTTKLISELQKL
FMSKNETYVLKLWPLFVKLLGRTLHRSGSFINSLLQLEELGFRSGAPMIKKIAFIAWKSL
IDNFALNPDILCSAKRLKLLMQPLSSIHVRTETLALTKLEVWWYLLMRLGPHLPANFEQV
CVPLIQSTISIDSNASPQGNSCHVATSPGLNPMTPVHKGASSPYGAPGTPRMNLSSNLGG
MATIPSIQLLGLEMLLHFLLGPEALSFAKQNKLVLSLEPLEHPLISSPSFFSKHANTLIT
AVHDSFVAVGKDAPDVVVSAIWKELISLVKSVTESGNKKEKPGSEVLTLLLKSLESIVKS
EVFPVSKTLVLMEITIKGLPQKVLGSPAYQVANMDILNGTPALFLIQLIFNNFLECGVSD
ERFFLSLESLVGCVLSGPTSPLAFSDSVLNVINQNAKQLENKEHLWKMWSVIVTPLTELI
NQTNEVNQGDALEHNFSAIYGALTLPVNHIFSEQRFPVATMKTLLRTWSELYRAFARCAA
LVATAEENLCCEELSSKIMSSLEDEGFSNLLFVDRIIYIITVMVDCIDFSPYNIKYQPKV
KSPQRPSDWSKKKNEPLGKLTSLFKLIVKVIYSFHTLSFKEAHSDTLFTIGNSITGIISS
VLGHISLPSMIRKIFATLTRPLALFYENSKLDEVPKVYSCLNNKLEKLLGEIIACLQFSY
TGTYDSELLEQLSPLLCIIFLHKNKQIRKQSAQFWNATFAKVMMLVYPEELKPVLTQAKQ
KFLLLLPGLETVEMMEESSGPYSDGTENSQLNVKISGMERKSNGKRDSFLAQTKNKKENM
KPAAKLKLESSSLKVKGEILLEEEKSTDFVFIPPEGKDAKERILTDHQKEVLKTKRCDIP
AMYNNLDVSQDTLFTQYSQEEPMEIPTLTRKPKEDSKMMITEEQMDSDIVIPQDVTEDCG
MAEHLEKSSLSNNECGSLDKTSPEMSNSNNDERKKALISSRKTSTECASSTENSFVVSSS
SVSNTTVAGTPPYPTSRRQTFITLEKFDGSENRPFSPSPLNNISSTVTVKNNQETMIKTD
FLPKAKQREGTFSKSDSEKIVNGTKRSSRRAGKAEQTGNKRSKPLMRSEPEKNTEESVEG
IVVLENNPPGLLNQTECVSDNQVHLSESTMEHDNTKLKAATVENAVLLETNTVEEKNVEI
NLESKENTPPVVISADQMVNEDSQVQITPNQKTLRRSSRRRSEVVESTTESQDKENSHQK
KERRKEEEKPLQKSPLHIKDDVLPKQKLIAEQTLQENLIEKGSNLHEKTLGETSANAETE
QNKKKADPENIKSEGDGTQDIVDKSSEKLVRGRTRYQTRRASQGLLSSIENSESDSSEAK
EEGSRKKRSGKWKNKSNESVDIQDQEEKVVKQECIKAENQSHDYKATSEEDVSIKSPICE
KQDESNTVICQDSTVTSDLLQVPDDLPNVCEEKNETSKYAEYSFTSLPVPESNLRTRNAI
KRLHKRDSFDNCSLGESSKIGISDISSLSEKTFQTLECQHKRSRRVRRSKGCDCCGEKSQ
PQEKSLIGLKNTENNDVEISETKKADVQAPVSPSETSQANPYSEGQFLDEHHSVNFHLGL
KEDNDTINDSLIVSETKSKENTMQESLPSGIVNFREEICDMDSSEAMSLESQESPNENFK
TVGPCLGDSKNVSQESLETKEEKPEETPKMELSLENVTVEGNACKVTESNLEKAKTMELN
VGNEASFHGQERTKTGISEEAAIEENKRNDDSEADTAKLNAKEVATEEFNSDISLSDNTT
PVKLNAQTEISEQTAAGELDGGNDVSDLHSSEETNTKMKNNEEMMIGEAMAETGHDGETE
NEGITTKTSKPDEAETNMLTAEMDNFVCDTVEMSTEEGIIDANKTETNTEYSKSEEKLDN
NQMVMESDILQEDHHTSQKVEEPSQCLASGTAISELIIEDNNASPQKLRELDPSLVSAND
SPSGMQTRCVWSPLASPSTSILKRGLKRSQEDEISSPVNKVRRVSFADPIYQAGLADDID
RRCSIVRSHSSNSSPIGKSVKTSPTTQSKHNTTSAKGFLSPGSRSPKFKSSKKCLISEMA
KESIPCPTESVYPPLVNCVAPVDIILPQITSNMWARGLGQLIRAKNIKTIGDLSTLTASE
IKTLPIRSPKVSNVKKALRIYHEQQVKTRGLEEIPVFDISEKTVNGIENKSLSPDEERLV
SDIIDPVALEIPLSKNLLAQISALALQLDSEDLHNYSGSQLFEMHEKLSCMANSVIKNLQ
SRWRSPSHENSI

Sequence length

2472

Interactions

View interactions

	KEGG		Reactome
	Signaling pathways regulating pluripotency of stem cells		Nonhomologous End-Joining (NHEJ)

Show/Hide Causal Diseases (4)

Disease term	Disease name	dbSNP ID	References
Causal
Breast cancer	Malignant neoplasm of breast	rs587776547, rs1137887, rs137853007, rs587776650, rs80359351, rs80359714, rs121917783, rs104886456, rs121964878, rs80359874, rs80357868, rs80357508, rs387906843, rs80357569, rs80358158 View all (309 more)
Muscular dystrophy	Muscular Dystrophy	rs200198778, rs121908110, rs121908185, rs58932704, rs61672878, rs60458016, rs387906881, rs397509417, rs267607644, rs267607634, rs59332535, rs797045898, rs755660222, rs142908436, rs886039913 View all (15 more)
Myopathy	Myopathies, Nemaline	rs137854521, rs386834236, rs121908557, rs121909092, rs111033570, rs104894299, rs104894294, rs121909273, rs121909274, rs121909275, rs199474699, rs199476140, rs118192165, rs118192169, rs118192166 View all (81 more)	12207938, 15336686, 25205138, 26809617, 16917880, 25356970, 24056153, 26019235
Nemaline myopathy	Nemaline Myopathy 2	rs80358250, rs80358249, rs121964854, rs1057515573, rs1057515574, rs121913662, rs1057515575, rs1364598710, rs387907090, rs397509419, rs367579275, rs397509420, rs397509421, rs398124167, rs398124172 View all (394 more)	26403434, 27105866, 26197980, 27357428, 24056153, 21520333, 25205138, 26809617, 12207938, 19805734, 26809612, 24725366, 25356970

Show/Hide Unknown Diseases (2)

Disease term	Disease name	Evidence	Source
Unknown
Alzheimer disease	Alzheimer disease		GWAS
Prostate cancer	Prostate cancer	Together, these results show that PRRX2 is an oncogene and might play a role in the aggressiveness of PC within the DNPC population.	GWAS, CBGDA

Show/Hide Text Mining Associations (11)

Disease Name	Relationship Type	References
Associations from Text Mining
Ataxia Telangiectasia	Associate	19483192
Bloom Syndrome	Associate	23486525
Breast Neoplasms	Associate	18084325, 19483192, 38244928
Carcinoma Ductal Breast	Associate	19483192
Carcinoma Hepatocellular	Associate	35769514
Carcinoma Ovarian Epithelial	Associate	34916377
Chromosomal Instability	Associate	36516748
DNA Virus Infections	Associate	36640924
Neoplasms	Associate	19483192
Periodontitis	Associate	39610070
Radiation Injuries	Stimulate	26053117

RIF1 (replication timing regulatory factor 1)