Gene Gene information from NCBI Gene database.
Entrez ID 55170
Gene name Protein arginine methyltransferase 6
Gene symbol PRMT6
Synonyms (NCBI Gene)
HRMT1L6
Chromosome 1
Chromosome location 1p13.3
Summary The protein encoded by this gene belongs to the arginine N-methyltransferase family, which catalyze the sequential transfer of methyl group from S-adenosyl-L-methionine to the side chain nitrogens of arginine residues within proteins, to form methylated a
miRNA miRNA information provided by mirtarbase database.
390
miRTarBase ID miRNA Experiments Reference
MIRT569367 hsa-miR-6895-5p PAR-CLIP 20371350
MIRT569366 hsa-miR-3919 PAR-CLIP 20371350
MIRT569365 hsa-miR-4756-3p PAR-CLIP 20371350
MIRT569363 hsa-miR-4330 PAR-CLIP 20371350
MIRT569364 hsa-miR-617 PAR-CLIP 20371350
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
43
GO ID Ontology Definition Evidence Reference
GO:0000122 Process Negative regulation of transcription by RNA polymerase II IEA
GO:0003682 Function Chromatin binding IEA
GO:0005515 Function Protein binding IPI 16157300, 16293633, 16600869, 23455924, 25416956, 28514442, 30420520, 32828318, 33961781
GO:0005634 Component Nucleus IDA 11724789
GO:0005634 Component Nucleus IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
608274 18241 ENSG00000198890
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q96LA8
Protein name Protein arginine N-methyltransferase 6 (EC 2.1.1.319) (Heterogeneous nuclear ribonucleoprotein methyltransferase-like protein 6) (Histone-arginine N-methyltransferase PRMT6)
Protein function Arginine methyltransferase that can catalyze the formation of both omega-N monomethylarginine (MMA) and asymmetrical dimethylarginine (aDMA), with a strong preference for the formation of aDMA (PubMed:17898714, PubMed:18077460, PubMed:18079182,
PDB 4HC4 , 4QPP , 4QQK , 4Y2H , 4Y30 , 5E8R , 5EGS , 5HZM , 5WCF , 6P7I , 6W6D , 6WAD , 7NR4
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF13649 Methyltransf_25 86 182 Methyltransferase domain Domain
Tissue specificity TISSUE SPECIFICITY: Highly expressed in kidney and testis. {ECO:0000269|PubMed:11724789}.
Sequence
MSQPKKRKLESGGGGEGGEGTEEEDGAEREAALERPRRTKRERDQLYYECYSDVSVHEEM
IADRVRTDAYRLGILRNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASAIWQQA
REVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKE
GG
LLLPASAELFIAPISDQMLEWRLGFWSQVKQHYGVDMSCLEGFATRCLMGHSEIVVQG
LSGEDVLARPQRFAQLELSRAGLEQELEAGVGGRFRCSCYGSAPMHGFAIWFQVTFPGGE
SEKPLVLSTSPFHPATHWKQALLYLNEPVQVEQDTDVSGEITLLPSRDNPRRLRVLLRYK
VGDQEEKTKDFAMED
Sequence length 375
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    RMTs methylate histone arginines
RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
27
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
BILIARY TRACT CANCER GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
BREAST CARCINOMA GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CANCER GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CERVICAL CARCINOMA GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References Evidence Score
Acquired Immunodeficiency Syndrome Associate 19726520
★☆☆☆☆
Found in Text Mining only
Anemia Associate 38385251
★☆☆☆☆
Found in Text Mining only
Azoospermia Associate 24303009
★☆☆☆☆
Found in Text Mining only
Breast Neoplasms Associate 20047962, 24447537, 24742914, 36941223
★☆☆☆☆
Found in Text Mining only
Carcinogenesis Associate 33740472
★☆☆☆☆
Found in Text Mining only
Colorectal Neoplasms Associate 29927001
★☆☆☆☆
Found in Text Mining only
Death Associate 19726520
★☆☆☆☆
Found in Text Mining only
Diabetes Gestational Associate 38087213
★☆☆☆☆
Found in Text Mining only
Disease Associate 38340948
★☆☆☆☆
Found in Text Mining only
Endometrial Neoplasms Stimulate 38299254
★☆☆☆☆
Found in Text Mining only