Gene Gene information from NCBI Gene database.
Entrez ID 55140
Gene name Elongator acetyltransferase complex subunit 3
Gene symbol ELP3
Synonyms (NCBI Gene)
KAT9
Chromosome 8
Chromosome location 8p21.1
Summary ELP3 is the catalytic subunit of the histone acetyltransferase elongator complex, which contributes to transcript elongation and also regulates the maturation of projection neurons (Creppe et al., 2009 [PubMed 19185337]).[supplied by OMIM, Apr 2009]
miRNA miRNA information provided by mirtarbase database.
306
miRTarBase ID miRNA Experiments Reference
MIRT031429 hsa-miR-16-5p Proteomics 18668040
MIRT041378 hsa-miR-193b-3p CLASH 23622248
MIRT038216 hsa-miR-342-5p CLASH 23622248
MIRT526162 hsa-miR-5583-3p HITS-CLIP 23313552
MIRT690167 hsa-miR-4293 HITS-CLIP 23313552
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
38
GO ID Ontology Definition Evidence Reference
GO:0000049 Function TRNA binding IEA
GO:0001764 Process Neuron migration IEA
GO:0001764 Process Neuron migration ISS
GO:0002098 Process TRNA wobble uridine modification IDA 29415125
GO:0002098 Process TRNA wobble uridine modification NAS 27847465
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
612722 20696 ENSG00000134014
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q9H9T3
Protein name Elongator complex protein 3 (hELP3) (EC 2.3.1.311) (tRNA uridine(34) acetyltransferase)
Protein function Catalytic tRNA acetyltransferase subunit of the elongator complex which is required for multiple tRNA modifications, including mcm5U (5-methoxycarbonylmethyl uridine), mcm5s2U (5-methoxycarbonylmethyl-2-thiouridine), and ncm5U (5-carbamoylmethyl
PDB 8PTX , 8PTY , 8PTZ , 8PU0
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF04055 Radical_SAM 96 305 Radical SAM superfamily Domain
PF16199 Radical_SAM_C 312 393 Radical_SAM C-terminal domain Family
PF00583 Acetyltransf_1 398 535 Acetyltransferase (GNAT) family Family
Tissue specificity TISSUE SPECIFICITY: Expressed in the cerebellum and spinal motor neurons. {ECO:0000269|PubMed:18996918}.
Sequence
Sequence length 547
Interactions View interactions
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
1
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Amyotrophic lateral sclerosis Uncertain significance rs190129217 RCV001095514
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Amyotrophic Lateral Sclerosis Associate 22470424
Carcinogenesis Associate 32186433
Frontotemporal Dementia Associate 25239657
Hypoxia Stimulate 32186433
Immunologic Deficiency Syndromes Associate 39925840
Melanoma Associate 22854966
Motor Neuron Disease Associate 25239657