Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
55109
Gene name Gene Name - the full gene name approved by the HGNC.
Angiogenic factor with G-patch and FHA domains 1
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
AGGF1
Synonyms (NCBI Gene) Gene synonyms aliases
GPATC7, GPATCH7, HSU84971, HUS84971, VG5Q
Chromosome Chromosome number
5
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
5q13.3
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes an angiogenic factor that promotes proliferation of endothelial cells. Mutations in this gene are associated with a susceptibility to Klippel-Trenaunay syndrome. Pseudogenes of this gene are found on chromosomes 3, 4, 10 and 16.[provided
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT019345 hsa-miR-148b-3p Microarray 17612493
MIRT030831 hsa-miR-21-5p Microarray 18591254
MIRT049919 hsa-miR-30a-3p CLASH 23622248
MIRT037003 hsa-miR-877-3p CLASH 23622248
MIRT097311 hsa-miR-4307 PAR-CLIP 22100165
Transcription factors
Transcription factor Regulation Reference
GATA1 Activation 19556247
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0001525 Process Angiogenesis IEA
GO:0001570 Process Vasculogenesis TAS 15905966
GO:0001938 Process Positive regulation of endothelial cell proliferation IDA 14961121
GO:0003676 Function Nucleic acid binding IEA
GO:0005515 Function Protein binding IPI 14961121, 31515488, 32296183
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
608464 24684 ENSG00000164252
Protein
UniProt ID Q8N302
Protein name Angiogenic factor with G patch and FHA domains 1 (Angiogenic factor VG5Q) (hVG5Q) (G patch domain-containing protein 7) (Vasculogenesis gene on 5q protein)
Protein function Promotes angiogenesis and the proliferation of endothelial cells. Able to bind to endothelial cells and promote cell proliferation, suggesting that it may act in an autocrine fashion.
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF17780 OCRE 203 254 OCRE domain Domain
PF00498 FHA 434 508 FHA domain Family
PF01585 G-patch 619 662 G-patch domain Family
Tissue specificity TISSUE SPECIFICITY: Widely expressed. Expressed in endothelial cells, vascular smooth muscle cells and osteoblasts. Expressed in umbilical vein endothelial cells and microvascular endothelial cells. {ECO:0000269|PubMed:14961121}.
Sequence
MASEAPSPPRSPPPPTSPEPELAQLRRKVEKLERELRSCKRQVREIEKLLHHTERLYQNA
ESNNQELRTQVEELSKILQRGRNEDNKKSDVEVQTENHAPWSISDYFYQTYYNDVSLPNK
VTELSDQQDQAIETSILNSKDHLQVENDAYPGTDRTENVKYRQVDHFASNSQEPASALAT
EDTSLEGSSLAESLRAAAEAAVSQTGFSYDENTGLYFDHSTGFYYDSENQLYYDPSTGIY
YYCDVESGRYQFHS
RVDLQPYPTSSTKQSKDKKLKKKRKDPDSSATNEEKDLNSEDQKAF
SVEHTSCNEEENFANMKKKAKIGIHHKNSPPKVTVPTSGNTIESPLHENISNSTSFKDEK
IMETDSEPEEGEITDSQTEDSYDEAITSEGNVTAEDSEDEDEDKIWPPCIRVIVIRSPVL
QIGSLFIITAVNPATIGREKDMEHTLRIPEVGVSKFHAEIYFDHDLQSYVLVDQGSQNGT
IVNGKQILQPKTKCDPYVLEHGDEVKIG
ETVLSFHIHPGSDTCDGCEPGQVRAHLRLDKK
DESFVGPTLSKEEKELERRKELKKIRVKYGLQNTEYEDEKTLKNPKYKDRAGKRREQVGS
EGTFQRDDAPASVHSEITDSNKGRKMLEKMGWKKGEGLGKDGGGMKTPIQLQLRRTHAGL
GT
GKPSSFEDVHLLQNKNKKNWDKARERFTENFPETKPQKDDPGTMPWVKGTLE
Sequence length 714
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    Signaling by BRAF and RAF fusions
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Anemia Iron-Refractory Iron Deficiency Anemia rs118204044, rs118204045, rs118204046, rs121918330, rs869320719, rs869312029, rs121918332, rs869320724, rs767094129, rs786205058, rs786205059, rs137853119, rs137853120, rs137853121, rs1384933966
View all (89 more)
Atrial septal defect Atrial Septal Defects rs137852951, rs137852953, rs137852955, rs267607106, rs104893900, rs104893901, rs104893903, rs606231358, rs606231359, rs137852683, rs606231360, rs104893907, rs104894073, rs1585703301, rs104894074
View all (25 more)
Hemangioma Hemangioma rs121917766
Hydrops fetalis Hydrops Fetalis rs28935477, rs1131691986
Unknown
Disease term Disease name Evidence References Source
Congestive heart failure Congestive heart failure ClinVar
Coenzyme Q10 Deficiency Coenzyme Q10 Deficiency GWAS
Associations from Text Mining
Disease Name Relationship Type References
Carcinoma Hepatocellular Stimulate 32090983
Cerebrovascular Disorders Associate 29641288
Esophageal Neoplasms Associate 31858546, 32925786
Esophageal Squamous Cell Carcinoma Stimulate 32925786
Hypoxia Inhibit 24462738
Hypoxia Associate 31858546
Hypoxia Brain Inhibit 24462738
Klippel Trenaunay Weber Syndrome Associate 16443853, 18564129, 19556247, 29641288
Lymphatic Metastasis Associate 32925786
Neoplasms Associate 24462738, 31858546, 32090983, 32925786