Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene miRNA Gene ontology Other IDs Protein Associated diseases
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	54980
Gene name Gene Name - the full gene name approved by the HGNC.	Chromosome 2 open reading frame 42
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	C2orf42
Synonyms (NCBI Gene) Gene synonyms aliases	-
Chromosome Chromosome number	2
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	2p13.3

Show/Hide all(127)

miRTarBase ID	miRNA	Experiments	Reference
MIRT027207	hsa-miR-103a-3p	Sequencing	20371350
MIRT032004	hsa-miR-16-5p	Sequencing	20371350
MIRT728101	hsa-miR-15a-5p	HITS-CLIP	22473208
MIRT728100	hsa-miR-15b-5p	HITS-CLIP	22473208
MIRT032004	hsa-miR-16-5p	HITS-CLIP	22473208
MIRT728098	hsa-miR-195-5p	HITS-CLIP	22473208
MIRT728099	hsa-miR-19a-3p	HITS-CLIP	22473208
MIRT728097	hsa-miR-19b-3p	HITS-CLIP	22473208
MIRT845785	hsa-miR-103a	CLIP-seq
MIRT845786	hsa-miR-107	CLIP-seq
MIRT845787	hsa-miR-15a	CLIP-seq
MIRT845788	hsa-miR-15b	CLIP-seq
MIRT845789	hsa-miR-16	CLIP-seq
MIRT845790	hsa-miR-195	CLIP-seq
MIRT845791	hsa-miR-19a	CLIP-seq
MIRT845792	hsa-miR-19b	CLIP-seq
MIRT845793	hsa-miR-200b	CLIP-seq
MIRT845794	hsa-miR-200c	CLIP-seq
MIRT845795	hsa-miR-2278	CLIP-seq
MIRT845796	hsa-miR-3613-3p	CLIP-seq
MIRT845797	hsa-miR-382	CLIP-seq
MIRT845798	hsa-miR-3936	CLIP-seq
MIRT845799	hsa-miR-424	CLIP-seq
MIRT845800	hsa-miR-429	CLIP-seq
MIRT845801	hsa-miR-4450	CLIP-seq
MIRT845802	hsa-miR-4503	CLIP-seq
MIRT845803	hsa-miR-4651	CLIP-seq
MIRT845804	hsa-miR-4672	CLIP-seq
MIRT845805	hsa-miR-4764-5p	CLIP-seq
MIRT845806	hsa-miR-491-5p	CLIP-seq
MIRT845807	hsa-miR-497	CLIP-seq
MIRT845808	hsa-miR-545	CLIP-seq
MIRT845809	hsa-miR-548p	CLIP-seq
MIRT845810	hsa-miR-561	CLIP-seq
MIRT845811	hsa-miR-608	CLIP-seq
MIRT1950944	hsa-miR-1276	CLIP-seq
MIRT1950945	hsa-miR-146a	CLIP-seq
MIRT1950946	hsa-miR-146b-5p	CLIP-seq
MIRT845787	hsa-miR-15a	CLIP-seq
MIRT845788	hsa-miR-15b	CLIP-seq
MIRT845789	hsa-miR-16	CLIP-seq
MIRT1950947	hsa-miR-1913	CLIP-seq
MIRT845790	hsa-miR-195	CLIP-seq
MIRT845791	hsa-miR-19a	CLIP-seq
MIRT845792	hsa-miR-19b	CLIP-seq
MIRT1950948	hsa-miR-3117-5p	CLIP-seq
MIRT1950949	hsa-miR-3143	CLIP-seq
MIRT1950950	hsa-miR-3157-3p	CLIP-seq
MIRT1950951	hsa-miR-324-3p	CLIP-seq
MIRT1950952	hsa-miR-3652	CLIP-seq
MIRT845797	hsa-miR-382	CLIP-seq
MIRT845798	hsa-miR-3936	CLIP-seq
MIRT845799	hsa-miR-424	CLIP-seq
MIRT1950953	hsa-miR-4311	CLIP-seq
MIRT1950954	hsa-miR-4426	CLIP-seq
MIRT1950955	hsa-miR-4430	CLIP-seq
MIRT845801	hsa-miR-4450	CLIP-seq
MIRT1950956	hsa-miR-4480	CLIP-seq
MIRT845802	hsa-miR-4503	CLIP-seq
MIRT1950957	hsa-miR-4505	CLIP-seq
MIRT1950958	hsa-miR-4647	CLIP-seq
MIRT845803	hsa-miR-4651	CLIP-seq
MIRT1950959	hsa-miR-4662b	CLIP-seq
MIRT1950960	hsa-miR-4680-5p	CLIP-seq
MIRT1950961	hsa-miR-4727-5p	CLIP-seq
MIRT845805	hsa-miR-4764-5p	CLIP-seq
MIRT1950962	hsa-miR-4769-3p	CLIP-seq
MIRT1950963	hsa-miR-4773	CLIP-seq
MIRT845806	hsa-miR-491-5p	CLIP-seq
MIRT845807	hsa-miR-497	CLIP-seq
MIRT1950964	hsa-miR-543	CLIP-seq
MIRT845808	hsa-miR-545	CLIP-seq
MIRT1950965	hsa-miR-548a-3p	CLIP-seq
MIRT1950966	hsa-miR-548e	CLIP-seq
MIRT1950967	hsa-miR-548f	CLIP-seq
MIRT845809	hsa-miR-548p	CLIP-seq
MIRT845810	hsa-miR-561	CLIP-seq
MIRT1950968	hsa-miR-580	CLIP-seq
MIRT1950969	hsa-miR-583	CLIP-seq
MIRT1950970	hsa-miR-589	CLIP-seq
MIRT845811	hsa-miR-608	CLIP-seq
MIRT845785	hsa-miR-103a	CLIP-seq
MIRT845786	hsa-miR-107	CLIP-seq
MIRT1950944	hsa-miR-1276	CLIP-seq
MIRT845787	hsa-miR-15a	CLIP-seq
MIRT845788	hsa-miR-15b	CLIP-seq
MIRT845789	hsa-miR-16	CLIP-seq
MIRT845790	hsa-miR-195	CLIP-seq
MIRT845795	hsa-miR-2278	CLIP-seq
MIRT845796	hsa-miR-3613-3p	CLIP-seq
MIRT1950952	hsa-miR-3652	CLIP-seq
MIRT2188747	hsa-miR-3918	CLIP-seq
MIRT845799	hsa-miR-424	CLIP-seq
MIRT1950953	hsa-miR-4311	CLIP-seq
MIRT1950954	hsa-miR-4426	CLIP-seq
MIRT1950955	hsa-miR-4430	CLIP-seq
MIRT1950956	hsa-miR-4480	CLIP-seq
MIRT1950957	hsa-miR-4505	CLIP-seq
MIRT2188748	hsa-miR-4529-5p	CLIP-seq
MIRT1950958	hsa-miR-4647	CLIP-seq
MIRT1950959	hsa-miR-4662b	CLIP-seq
MIRT845804	hsa-miR-4672	CLIP-seq
MIRT1950960	hsa-miR-4680-5p	CLIP-seq
MIRT2188749	hsa-miR-4699-3p	CLIP-seq
MIRT1950961	hsa-miR-4727-5p	CLIP-seq
MIRT1950962	hsa-miR-4769-3p	CLIP-seq
MIRT845807	hsa-miR-497	CLIP-seq
MIRT1950968	hsa-miR-580	CLIP-seq
MIRT1950969	hsa-miR-583	CLIP-seq
MIRT1950944	hsa-miR-1276	CLIP-seq
MIRT1950945	hsa-miR-146a	CLIP-seq
MIRT1950946	hsa-miR-146b-5p	CLIP-seq
MIRT1950952	hsa-miR-3652	CLIP-seq
MIRT1950953	hsa-miR-4311	CLIP-seq
MIRT1950954	hsa-miR-4426	CLIP-seq
MIRT1950955	hsa-miR-4430	CLIP-seq
MIRT1950956	hsa-miR-4480	CLIP-seq
MIRT1950957	hsa-miR-4505	CLIP-seq
MIRT1950958	hsa-miR-4647	CLIP-seq
MIRT1950959	hsa-miR-4662b	CLIP-seq
MIRT1950960	hsa-miR-4680-5p	CLIP-seq
MIRT1950961	hsa-miR-4727-5p	CLIP-seq
MIRT1950962	hsa-miR-4769-3p	CLIP-seq
MIRT1950963	hsa-miR-4773	CLIP-seq
MIRT1950968	hsa-miR-580	CLIP-seq
MIRT1950969	hsa-miR-583	CLIP-seq
MIRT1950970	hsa-miR-589	CLIP-seq

Show/Hide all(3)

GO ID	Ontology	Definition	Evidence	Reference
GO:0005515	Function	Protein binding	IPI	25416956, 32296183
GO:0005634	Component	Nucleus	IBA
GO:0005654	Component	Nucleoplasm	IDA

MIM	HGNC	e!Ensembl
HGNC	N/A	HGNC

Protein

UniProt ID

Q9NWW7

Protein name

Uncharacterized protein C2orf42

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF14952	zf-tcix	16 → 57	Putative treble-clef, zinc-finger, Zn-binding	Domain

Sequence

MEPNSLRTKVPAFLSDLGKATLRGIRKCPRCGTYNGTRGLSCKNKTCGTIFRYGARKQPS
VEAVKIITGSDLQVYSVRQRDRGPDYRCFVELGVSETTIQTVDGTIITQLSSGRCYVPSC
LKAATQGVVENQCQHIKLAVNCQAEATPLTLKSSVLNAMQASPETKQTIWQLATEPTGPL
VQRITKNILVVKCKASQKHSLGYLHTSFVQKVSGKSLPERRFFCSCQTLKSHKSNASKDE
TAQRCIHFFACICAFASDETLAQEFSDFLNFDSSGLKEIIVPQLGCHSESTVSACESTAS
KSKKRRKDEVSGAQMNSSLLPQDAVSSNLRKSGLKKPVVASSLKRQACGQLLDEAQVTLS
FQDWLASVTERIHQTMHYQFDGKPEPLVFHIPQSFFDALQQRISIGSAKKRLPNSTTAFV
RKDALPLGTFSKYTWHITNILQVKQILDTPEMPLEITRSFIQNRDGTYELFKCPKVEVES
IAETYGRIEKQPVLRPLELKTFLKVGNTSPDQKEPTPFIIEWIPDILPQSKIGELRIKFE
YGHHRNGHVAEYQDQRPPLDQPLELAPLTTITFP

Sequence length

574

Interactions

View interactions

Show/Hide Unknown Diseases (1)

Disease merge term	Disease name	Evidence	References	Source
Unknown Includes: (1) ClinVar NON-pathogenic variants (Uncertain, Benign, Conflicting, VUS), (2) GenCC associations, (3) GWAS associations, (4) CBGDA evidence-based associations. NOTE: Diseases with pathogenic evidence are excluded to avoid conflicts.
Alzheimer disease	Alzheimer's disease or family history of Alzheimer's disease	N/A	N/A	GWAS

Show/Hide Text Mining Associations (1)

Disease Name	Relationship Type	References
Associations from Text Mining Disease associations identified through Pubtator
Endometrial Neoplasms	Associate	35880269

C2orf42 (chromosome 2 open reading frame 42)