Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
5495
Gene name Gene Name - the full gene name approved by the HGNC.
Protein phosphatase, Mg2+/Mn2+ dependent 1B
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
PPM1B
Synonyms (NCBI Gene) Gene synonyms aliases
PP2C-beta, PP2C-beta-X, PP2CB, PP2CBETA, PPC2BETAX
Chromosome Chromosome number
2
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
2p21
Summary Summary of gene provided in NCBI Entrez Gene.
The protein encoded by this gene is a member of the PP2C family of Ser/Thr protein phosphatases. PP2C family members are known to be negative regulators of cell stress response pathways. This phosphatase has been shown to dephosphorylate cyclin-dependent
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT044250 hsa-miR-106b-5p CLASH 23622248
MIRT568918 hsa-miR-551b-5p PAR-CLIP 20371350
MIRT568917 hsa-miR-7-1-3p PAR-CLIP 20371350
MIRT568916 hsa-miR-7-2-3p PAR-CLIP 20371350
MIRT568915 hsa-miR-8485 PAR-CLIP 20371350
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000287 Function Magnesium ion binding IEA
GO:0004722 Function Protein serine/threonine phosphatase activity IDA 20801214
GO:0005515 Function Protein binding IPI 16872604, 17620599, 18930133, 25241761
GO:0005634 Component Nucleus IBA 21873635
GO:0005730 Component Nucleolus IDA
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
603770 9276 ENSG00000138032
Protein
UniProt ID O75688
Protein name Protein phosphatase 1B (EC 3.1.3.16) (Protein phosphatase 2C isoform beta) (PP2C-beta)
Protein function Enzyme with a broad specificity. Dephosphorylates CDK2 and CDK6 in vitro. Dephosphorylates PRKAA1 and PRKAA2. Inhibits TBK1-mediated antiviral signaling by dephosphorylating it at 'Ser-172'. Plays an important role in the termination of TNF-alph
PDB 2P8E
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00481 PP2C 22 288 Protein phosphatase 2C Family
PF07830 PP2C_C 289 368 Protein serine/threonine phosphatase 2C, C-terminal domain Domain
Tissue specificity TISSUE SPECIFICITY: Highly expressed in heart and skeletal muscle.
Sequence
Sequence length 479
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  MAPK signaling pathway   ISG15 antiviral mechanism
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Cystinuria Cystinuria rs121908479, rs121908480, rs121908482, rs121908483, rs121908484, rs121908485, rs121912691, rs121912693, rs121912694, rs387907276, rs797044609, rs1085307095, rs886042834, rs745319034, rs200483989
View all (20 more)
Developmental delay Global developmental delay rs28941770, rs199469464, rs281865469, rs143747297, rs398123009, rs587777428, rs786205133, rs606231459, rs797044854, rs797045027, rs864309504, rs878853160, rs886039902, rs886042046, rs886041291
View all (32 more)
Mental retardation Moderate intellectual disability rs5742905, rs267607136, rs267607137, rs2131714307, rs267607038, rs267607042, rs80338685, rs137853127, rs80338815, rs28940893, rs387906309, rs121908096, rs121908099, rs587784365, rs121918315
View all (1024 more)
Unknown
Disease term Disease name Evidence References Source
Ovarian cancer Ovarian cancer Conditional KD of IL6 in the OCCA xenograft model delays tumor growth GWAS, CBGDA
Insomnia Insomnia GWAS
Associations from Text Mining
Disease Name Relationship Type References
Alzheimer's disease without Neurofibrillary tangles Inhibit 33380426
Breast Neoplasms Associate 36928924
Down Syndrome Associate 33380426
Hypotonia Cystinuria Syndrome Associate 28726805
Neoplasm Metastasis Associate 36928924
Osteosarcoma Associate 30816442
Primary Ovarian Insufficiency Associate 36732629
Stomach Neoplasms Associate 38364962