Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
54872
Gene name Gene Name - the full gene name approved by the HGNC.
Phosphatidylinositol glycan anchor biosynthesis class G (EMM blood group)
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
PIGG
Synonyms (NCBI Gene) Gene synonyms aliases
EMM, GPI7, LAS21, MRT53, NEDHSCA, PRO4405, RLGS1930
Disease Acronyms (UniProt) Disease acronyms from UniProt database
NEDHSCA
Chromosome Chromosome number
4
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
4p16.3
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes an enzyme involved in glycosylphosphatidylinositol-anchor biosynthesis. The encoded protein, which is localized to the endoplasmic reticulum, is involved in transferring ethanoloamine phosphate to mannose 2 of glycosylphosphatidylinosito
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs150259543 G>A Pathogenic 3 prime UTR variant, stop gained, coding sequence variant, 5 prime UTR variant, non coding transcript variant
rs150802299 A>C Likely-pathogenic Genic downstream transcript variant, intron variant, coding sequence variant, missense variant, non coding transcript variant
rs372392424 C>T Pathogenic Genic downstream transcript variant, intron variant, non coding transcript variant, coding sequence variant, missense variant
rs752545577 C>T Pathogenic Genic upstream transcript variant, upstream transcript variant, 5 prime UTR variant, coding sequence variant, stop gained, non coding transcript variant
rs757141700 A>C,G Likely-pathogenic 5 prime UTR variant, initiator codon variant, upstream transcript variant, missense variant, coding sequence variant, genic upstream transcript variant, non coding transcript variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT021138 hsa-miR-186-5p Sequencing 20371350
MIRT052101 hsa-let-7b-5p CLASH 23622248
MIRT711192 hsa-miR-606 HITS-CLIP 19536157
MIRT711191 hsa-miR-532-5p HITS-CLIP 19536157
MIRT711190 hsa-miR-5193 HITS-CLIP 19536157
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0005783 Component Endoplasmic reticulum IDA 15632136
GO:0005789 Component Endoplasmic reticulum membrane TAS
GO:0006506 Process GPI anchor biosynthetic process IBA 21873635
GO:0006506 Process GPI anchor biosynthetic process IDA 15632136
GO:0016020 Component Membrane HDA 19946888
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
616918 25985 ENSG00000174227
Protein
UniProt ID Q5H8A4
Protein name GPI ethanolamine phosphate transferase 2, catalytic subunit (EC 2.-.-.-) (GPI7 homolog) (hGPI7) (Phosphatidylinositol-glycan biosynthesis class G protein) (PIG-G)
Protein function Catalytic subunit of the ethanolamine phosphate transferase 2 complex that transfers an ethanolamine phosphate (EtNP) from a phosphatidylethanolamine (PE) to the 6-OH position of the second alpha-1,6-linked mannose of a 6-PEtn-alpha-D-Man-(1->2)
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01663 Phosphodiest 168 292 Type I phosphodiesterase / nucleotide pyrophosphatase Family
Sequence
MRLGSGTFATCCVAIEVLGIAVFLRGFFPAPVRSSARAEHGAEPPAPEPSAGASSNWTTL
PPPLFSKVVIVLIDALRDDFVFGSKGVKFMPYTTYLVEKGASHSFVAEAKPPTVTMPRIK
ALMTGSLPGFVDVIRNLNSPALLEDSVIRQAKAAGKRIVFYGDETWVKLFPKHFVEYDGT
TSFFVSDYTEVDNNVTRHLDKVLKRGDWDILILHYLGLDHIGHISGPNSPLIGQKLSEMD
SVLMKIHTSLQSKERETPLPNLLVLCGDHGMSETGSHGASSTEEVNTPLILI
SSAFERKP
GDIRHPKHVQQTDVAATLAIALGLPIPKDSVGSLLFPVVEGRPMREQLRFLHLNTVQLSK
LLQENVPSYEKDPGFEQFKMSERLHGNWIRLYLEEKHSEVLFNLGSKVLRQYLDALKTLS
LSLSAQVAQYDIYSMMVGTVVVLEVLTLLLLSVPQALRRKAELEVPLSSPGFSLLFYLVI
LVLSAVHVIVCTSAESSCYFCGLSWLAAGGVMVLASALLCVIVSVLTNVLVGGNTPRKNP
MHPSSRWSELDLLILLGTAGHVLSLGASSFVEEEHQTWYFLVNTLCLALSQETYRNYFLG
DDGEPPCGLCVEQGHDGATAAWQDGPGCDVLERDKGHGSPSTSEVLRGREKWMVLASPWL
ILACCRLLRSLNQTGVQWAHRPDLGHWLTSSDHKAELSVLAALSLLVVFVLVQRGCSPVS
KAALALGLLGVYCYRAAIGSVRFPWRPDSKDISKGIIEARFVYVFVLGILFTGTKDLLKS
QVIAADFKLKTVGLWEIYSGLVLLAALLFRPHNLPVLAFSLLIQTLMTKFIWKPLRHDAA
EITVMHYWFGQAFFYFQGNSNNIATVDISAGFVGLDTYVEIPAVLLTAFGTYAGPVLWAS
HLVHFLSSETRSGSALSHACFCYALICSIPVFTYIVLVTSLRYHLFIWSVFSPKLLYEGM
HLLITAAVCVFFTAMDQTRLTQS
Sequence length 983
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
Metabolic pathways
  Synthesis of glycosylphosphatidylinositol (GPI)
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Autism Autistic behavior rs121964908, rs62643608, rs181327458, rs797046134, rs869312704, rs1555013332, rs876657679, rs1057518999, rs1057518658, rs771827120, rs1555187899, rs773080572, rs753871454, rs1684130791, rs1684180699
View all (8 more)
Developmental delay Global developmental delay rs28941770, rs199469464, rs281865469, rs143747297, rs398123009, rs587777428, rs786205133, rs606231459, rs797044854, rs797045027, rs864309504, rs878853160, rs886039902, rs886042046, rs886041291
View all (32 more)
Hyperphosphatasia with mental retardation HYPERPHOSPHATASIA WITH MENTAL RETARDATION SYNDROME 1 rs139073416, rs267606951, rs267606952, rs387907023, rs142164373, rs770591449, rs368953604, rs879255232, rs774843232, rs773359554, rs587776970, rs587777251, rs587777252, rs371549948, rs587777733
View all (45 more)
Mental retardation MENTAL RETARDATION, AUTOSOMAL RECESSIVE 53 rs5742905, rs267607136, rs267607137, rs2131714307, rs267607038, rs267607042, rs80338685, rs137853127, rs80338815, rs28940893, rs387906309, rs121908096, rs121908099, rs587784365, rs121918315
View all (1024 more)
28581210, 30914295
Associations from Text Mining
Disease Name Relationship Type References
Immunologic Deficiency Syndromes Inhibit 26996948
Immunologic Deficiency Syndromes Associate 26996948
Intellectual Disability Associate 26996948, 28581210
Muscle Hypotonia Associate 26996948
Plaque Atherosclerotic Associate 39198424
Seizures Associate 26996948