Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene miRNA Transcription factors Gene ontology Other IDs Protein Pathways Associated diseases
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	54778
Gene name Gene Name - the full gene name approved by the HGNC.	Ring finger protein 111
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	RNF111
Synonyms (NCBI Gene) Gene synonyms aliases	ARK, hRNF111
Chromosome Chromosome number	15
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	15q22.1-q22.2
Summary Summary of gene provided in NCBI Entrez Gene.	The protein encoded by this gene is a nuclear RING-domain containing E3 ubiquitin ligase. This protein interacts with the transforming growth factor (TGF) -beta/NODAL signaling pathway by promoting the ubiquitination and proteosomal degradation of negativ

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miRTarBase ID	miRNA	Experiments	Reference
MIRT021196	hsa-miR-186-5p	Sequencing	20371350
MIRT027713	hsa-miR-98-5p	Microarray	19088304
MIRT029993	hsa-miR-26b-5p	Microarray	19088304
MIRT031301	hsa-miR-19b-3p	Sequencing	20371350
MIRT031911	hsa-miR-16-5p	Microarray	21199864
MIRT042148	hsa-miR-484	CLASH	23622248
MIRT534698	hsa-miR-153-5p	PAR-CLIP	22012620
MIRT534697	hsa-miR-130a-5p	PAR-CLIP	22012620
MIRT534696	hsa-miR-23a-3p	PAR-CLIP	22012620
MIRT534695	hsa-miR-23b-3p	PAR-CLIP	22012620
MIRT534694	hsa-miR-23c	PAR-CLIP	22012620
MIRT534693	hsa-miR-6875-3p	PAR-CLIP	22012620
MIRT534692	hsa-miR-4659a-3p	PAR-CLIP	22012620
MIRT534691	hsa-miR-4659b-3p	PAR-CLIP	22012620
MIRT513691	hsa-miR-101-3p	PAR-CLIP	23446348
MIRT513692	hsa-miR-144-3p	PAR-CLIP	23446348
MIRT513691	hsa-miR-101-3p	PAR-CLIP	23446348
MIRT513690	hsa-miR-3662	PAR-CLIP	23446348
MIRT513689	hsa-miR-545-5p	PAR-CLIP	23446348
MIRT513688	hsa-miR-548aj-5p	PAR-CLIP	23446348
MIRT513687	hsa-miR-548f-5p	PAR-CLIP	23446348
MIRT513686	hsa-miR-548g-5p	PAR-CLIP	23446348
MIRT513685	hsa-miR-548x-5p	PAR-CLIP	23446348
MIRT513684	hsa-miR-1468-3p	PAR-CLIP	23446348
MIRT513683	hsa-miR-548aw	PAR-CLIP	23446348
MIRT469188	hsa-miR-1911-3p	PAR-CLIP	23592263
MIRT469187	hsa-miR-6753-5p	PAR-CLIP	23592263
MIRT469186	hsa-miR-4418	PAR-CLIP	23592263
MIRT469185	hsa-miR-509-3-5p	PAR-CLIP	23592263
MIRT469184	hsa-miR-509-5p	PAR-CLIP	23592263
MIRT469183	hsa-miR-6873-5p	PAR-CLIP	23592263
MIRT469182	hsa-miR-4476	PAR-CLIP	23592263
MIRT469181	hsa-miR-6876-5p	PAR-CLIP	23592263
MIRT469180	hsa-miR-2392	PAR-CLIP	23592263
MIRT469179	hsa-miR-1321	PAR-CLIP	23592263
MIRT469178	hsa-miR-4739	PAR-CLIP	23592263
MIRT469177	hsa-miR-4756-5p	PAR-CLIP	23592263
MIRT469176	hsa-miR-624-5p	PAR-CLIP	23592263
MIRT469175	hsa-miR-4712-3p	PAR-CLIP	23592263
MIRT469174	hsa-miR-17-3p	PAR-CLIP	23592263
MIRT469173	hsa-miR-5002-3p	PAR-CLIP	23592263
MIRT469172	hsa-miR-4419a	PAR-CLIP	23592263
MIRT469171	hsa-miR-4510	PAR-CLIP	23592263
MIRT469170	hsa-miR-6127	PAR-CLIP	23592263
MIRT469169	hsa-miR-6129	PAR-CLIP	23592263
MIRT469168	hsa-miR-6130	PAR-CLIP	23592263
MIRT469167	hsa-miR-6133	PAR-CLIP	23592263
MIRT469166	hsa-miR-3616-3p	PAR-CLIP	23592263
MIRT469165	hsa-miR-4533	PAR-CLIP	23592263
MIRT469164	hsa-miR-31-5p	PAR-CLIP	23592263
MIRT469163	hsa-miR-6716-5p	PAR-CLIP	23592263
MIRT469162	hsa-miR-149-3p	PAR-CLIP	23592263
MIRT469161	hsa-miR-4728-5p	PAR-CLIP	23592263
MIRT469159	hsa-miR-6785-5p	PAR-CLIP	23592263
MIRT469160	hsa-miR-6883-5p	PAR-CLIP	23592263
MIRT439762	hsa-miR-21-5p	HITS-CLIP	22473208
MIRT726736	hsa-miR-19a-3p	HITS-CLIP	22473208
MIRT031301	hsa-miR-19b-3p	HITS-CLIP	22473208
MIRT439762	hsa-miR-21-5p	HITS-CLIP	22473208
MIRT469179	hsa-miR-1321	PAR-CLIP	26701625
MIRT469179	hsa-miR-1321	PAR-CLIP	26701625
MIRT469179	hsa-miR-1321	PAR-CLIP	26701625
MIRT469179	hsa-miR-1321	PAR-CLIP	26701625
MIRT469162	hsa-miR-149-3p	PAR-CLIP	26701625
MIRT469162	hsa-miR-149-3p	PAR-CLIP	26701625
MIRT469162	hsa-miR-149-3p	PAR-CLIP	26701625
MIRT469162	hsa-miR-149-3p	PAR-CLIP	26701625
MIRT469174	hsa-miR-17-3p	PAR-CLIP	26701625
MIRT469174	hsa-miR-17-3p	PAR-CLIP	26701625
MIRT469188	hsa-miR-1911-3p	PAR-CLIP	26701625
MIRT469188	hsa-miR-1911-3p	PAR-CLIP	26701625
MIRT469188	hsa-miR-1911-3p	PAR-CLIP	26701625
MIRT469188	hsa-miR-1911-3p	PAR-CLIP	26701625
MIRT469180	hsa-miR-2392	PAR-CLIP	26701625
MIRT469180	hsa-miR-2392	PAR-CLIP	26701625
MIRT469180	hsa-miR-2392	PAR-CLIP	26701625
MIRT469180	hsa-miR-2392	PAR-CLIP	26701625
MIRT469164	hsa-miR-31-5p	PAR-CLIP	26701625
MIRT469164	hsa-miR-31-5p	PAR-CLIP	26701625
MIRT469164	hsa-miR-31-5p	PAR-CLIP	26701625
MIRT469164	hsa-miR-31-5p	PAR-CLIP	26701625
MIRT469166	hsa-miR-3616-3p	PAR-CLIP	26701625
MIRT469166	hsa-miR-3616-3p	PAR-CLIP	26701625
MIRT469166	hsa-miR-3616-3p	PAR-CLIP	26701625
MIRT469166	hsa-miR-3616-3p	PAR-CLIP	26701625
MIRT469186	hsa-miR-4418	PAR-CLIP	26701625
MIRT469186	hsa-miR-4418	PAR-CLIP	26701625
MIRT469172	hsa-miR-4419a	PAR-CLIP	26701625
MIRT469172	hsa-miR-4419a	PAR-CLIP	26701625
MIRT469172	hsa-miR-4419a	PAR-CLIP	26701625
MIRT469172	hsa-miR-4419a	PAR-CLIP	26701625
MIRT469182	hsa-miR-4476	PAR-CLIP	26701625
MIRT469182	hsa-miR-4476	PAR-CLIP	26701625
MIRT469182	hsa-miR-4476	PAR-CLIP	26701625
MIRT469182	hsa-miR-4476	PAR-CLIP	26701625
MIRT469171	hsa-miR-4510	PAR-CLIP	26701625
MIRT469171	hsa-miR-4510	PAR-CLIP	26701625
MIRT469171	hsa-miR-4510	PAR-CLIP	26701625
MIRT469171	hsa-miR-4510	PAR-CLIP	26701625
MIRT469165	hsa-miR-4533	PAR-CLIP	26701625
MIRT469165	hsa-miR-4533	PAR-CLIP	26701625
MIRT469165	hsa-miR-4533	PAR-CLIP	26701625
MIRT469165	hsa-miR-4533	PAR-CLIP	26701625
MIRT469175	hsa-miR-4712-3p	PAR-CLIP	26701625
MIRT469175	hsa-miR-4712-3p	PAR-CLIP	26701625
MIRT469175	hsa-miR-4712-3p	PAR-CLIP	26701625
MIRT469175	hsa-miR-4712-3p	PAR-CLIP	26701625
MIRT469161	hsa-miR-4728-5p	PAR-CLIP	26701625
MIRT469161	hsa-miR-4728-5p	PAR-CLIP	26701625
MIRT469161	hsa-miR-4728-5p	PAR-CLIP	26701625
MIRT469161	hsa-miR-4728-5p	PAR-CLIP	26701625
MIRT469178	hsa-miR-4739	PAR-CLIP	26701625
MIRT469178	hsa-miR-4739	PAR-CLIP	26701625
MIRT469178	hsa-miR-4739	PAR-CLIP	26701625
MIRT469178	hsa-miR-4739	PAR-CLIP	26701625
MIRT469177	hsa-miR-4756-5p	PAR-CLIP	26701625
MIRT469177	hsa-miR-4756-5p	PAR-CLIP	26701625
MIRT469177	hsa-miR-4756-5p	PAR-CLIP	26701625
MIRT469177	hsa-miR-4756-5p	PAR-CLIP	26701625
MIRT469173	hsa-miR-5002-3p	PAR-CLIP	26701625
MIRT469173	hsa-miR-5002-3p	PAR-CLIP	26701625
MIRT469185	hsa-miR-509-3-5p	PAR-CLIP	26701625
MIRT469185	hsa-miR-509-3-5p	PAR-CLIP	26701625
MIRT469184	hsa-miR-509-5p	PAR-CLIP	26701625
MIRT469184	hsa-miR-509-5p	PAR-CLIP	26701625
MIRT469170	hsa-miR-6127	PAR-CLIP	26701625
MIRT469170	hsa-miR-6127	PAR-CLIP	26701625
MIRT469170	hsa-miR-6127	PAR-CLIP	26701625
MIRT469170	hsa-miR-6127	PAR-CLIP	26701625
MIRT469169	hsa-miR-6129	PAR-CLIP	26701625
MIRT469169	hsa-miR-6129	PAR-CLIP	26701625
MIRT469169	hsa-miR-6129	PAR-CLIP	26701625
MIRT469169	hsa-miR-6129	PAR-CLIP	26701625
MIRT469168	hsa-miR-6130	PAR-CLIP	26701625
MIRT469168	hsa-miR-6130	PAR-CLIP	26701625
MIRT469168	hsa-miR-6130	PAR-CLIP	26701625
MIRT469168	hsa-miR-6130	PAR-CLIP	26701625
MIRT469167	hsa-miR-6133	PAR-CLIP	26701625
MIRT469167	hsa-miR-6133	PAR-CLIP	26701625
MIRT469167	hsa-miR-6133	PAR-CLIP	26701625
MIRT469167	hsa-miR-6133	PAR-CLIP	26701625
MIRT469176	hsa-miR-624-5p	PAR-CLIP	26701625
MIRT469176	hsa-miR-624-5p	PAR-CLIP	26701625
MIRT469176	hsa-miR-624-5p	PAR-CLIP	26701625
MIRT469176	hsa-miR-624-5p	PAR-CLIP	26701625
MIRT469163	hsa-miR-6716-5p	PAR-CLIP	26701625
MIRT469163	hsa-miR-6716-5p	PAR-CLIP	26701625
MIRT469163	hsa-miR-6716-5p	PAR-CLIP	26701625
MIRT469163	hsa-miR-6716-5p	PAR-CLIP	26701625
MIRT469187	hsa-miR-6753-5p	PAR-CLIP	26701625
MIRT469187	hsa-miR-6753-5p	PAR-CLIP	26701625
MIRT469187	hsa-miR-6753-5p	PAR-CLIP	26701625
MIRT469187	hsa-miR-6753-5p	PAR-CLIP	26701625
MIRT469159	hsa-miR-6785-5p	PAR-CLIP	26701625
MIRT469159	hsa-miR-6785-5p	PAR-CLIP	26701625
MIRT469159	hsa-miR-6785-5p	PAR-CLIP	26701625
MIRT469159	hsa-miR-6785-5p	PAR-CLIP	26701625
MIRT469183	hsa-miR-6873-5p	PAR-CLIP	26701625
MIRT469183	hsa-miR-6873-5p	PAR-CLIP	26701625
MIRT469183	hsa-miR-6873-5p	PAR-CLIP	26701625
MIRT469183	hsa-miR-6873-5p	PAR-CLIP	26701625
MIRT469181	hsa-miR-6876-5p	PAR-CLIP	26701625
MIRT469181	hsa-miR-6876-5p	PAR-CLIP	26701625
MIRT469181	hsa-miR-6876-5p	PAR-CLIP	26701625
MIRT469181	hsa-miR-6876-5p	PAR-CLIP	26701625
MIRT469160	hsa-miR-6883-5p	PAR-CLIP	26701625
MIRT469160	hsa-miR-6883-5p	PAR-CLIP	26701625
MIRT469160	hsa-miR-6883-5p	PAR-CLIP	26701625
MIRT469160	hsa-miR-6883-5p	PAR-CLIP	26701625
MIRT534698	hsa-miR-153-5p	PAR-CLIP	22012620
MIRT534697	hsa-miR-130a-5p	PAR-CLIP	22012620
MIRT534696	hsa-miR-23a-3p	PAR-CLIP	22012620
MIRT534695	hsa-miR-23b-3p	PAR-CLIP	22012620
MIRT534694	hsa-miR-23c	PAR-CLIP	22012620
MIRT534693	hsa-miR-6875-3p	PAR-CLIP	22012620
MIRT534692	hsa-miR-4659a-3p	PAR-CLIP	22012620
MIRT534691	hsa-miR-4659b-3p	PAR-CLIP	22012620
MIRT513691	hsa-miR-101-3p	PAR-CLIP	23446348
MIRT513692	hsa-miR-144-3p	PAR-CLIP	23446348
MIRT513691	hsa-miR-101-3p	PAR-CLIP	23446348
MIRT513690	hsa-miR-3662	PAR-CLIP	23446348
MIRT513689	hsa-miR-545-5p	PAR-CLIP	23446348
MIRT513688	hsa-miR-548aj-5p	PAR-CLIP	23446348
MIRT513687	hsa-miR-548f-5p	PAR-CLIP	23446348
MIRT513686	hsa-miR-548g-5p	PAR-CLIP	23446348
MIRT513685	hsa-miR-548x-5p	PAR-CLIP	23446348
MIRT513684	hsa-miR-1468-3p	PAR-CLIP	23446348
MIRT513683	hsa-miR-548aw	PAR-CLIP	23446348
MIRT469188	hsa-miR-1911-3p	PAR-CLIP	23592263
MIRT469187	hsa-miR-6753-5p	PAR-CLIP	23592263
MIRT469186	hsa-miR-4418	PAR-CLIP	23592263
MIRT469185	hsa-miR-509-3-5p	PAR-CLIP	23592263
MIRT469184	hsa-miR-509-5p	PAR-CLIP	23592263
MIRT469183	hsa-miR-6873-5p	PAR-CLIP	23592263
MIRT469182	hsa-miR-4476	PAR-CLIP	23592263
MIRT469181	hsa-miR-6876-5p	PAR-CLIP	23592263
MIRT469180	hsa-miR-2392	PAR-CLIP	23592263
MIRT469179	hsa-miR-1321	PAR-CLIP	23592263
MIRT469178	hsa-miR-4739	PAR-CLIP	23592263
MIRT469177	hsa-miR-4756-5p	PAR-CLIP	23592263
MIRT469176	hsa-miR-624-5p	PAR-CLIP	23592263
MIRT469175	hsa-miR-4712-3p	PAR-CLIP	23592263
MIRT469174	hsa-miR-17-3p	PAR-CLIP	23592263
MIRT469173	hsa-miR-5002-3p	PAR-CLIP	23592263
MIRT469172	hsa-miR-4419a	PAR-CLIP	23592263
MIRT469171	hsa-miR-4510	PAR-CLIP	23592263
MIRT469170	hsa-miR-6127	PAR-CLIP	23592263
MIRT469169	hsa-miR-6129	PAR-CLIP	23592263
MIRT469168	hsa-miR-6130	PAR-CLIP	23592263
MIRT469167	hsa-miR-6133	PAR-CLIP	23592263
MIRT469166	hsa-miR-3616-3p	PAR-CLIP	23592263
MIRT469165	hsa-miR-4533	PAR-CLIP	23592263
MIRT469164	hsa-miR-31-5p	PAR-CLIP	23592263
MIRT469163	hsa-miR-6716-5p	PAR-CLIP	23592263
MIRT469162	hsa-miR-149-3p	PAR-CLIP	23592263
MIRT469161	hsa-miR-4728-5p	PAR-CLIP	23592263
MIRT469159	hsa-miR-6785-5p	PAR-CLIP	23592263
MIRT469160	hsa-miR-6883-5p	PAR-CLIP	23592263
MIRT1309241	hsa-miR-1	CLIP-seq
MIRT1309242	hsa-miR-101	CLIP-seq
MIRT1309243	hsa-miR-1182	CLIP-seq
MIRT1309244	hsa-miR-1275	CLIP-seq
MIRT1309245	hsa-miR-127-5p	CLIP-seq
MIRT1309246	hsa-miR-1292	CLIP-seq
MIRT1309247	hsa-miR-144	CLIP-seq
MIRT1309248	hsa-miR-155	CLIP-seq
MIRT1309249	hsa-miR-188-5p	CLIP-seq
MIRT1309250	hsa-miR-19a	CLIP-seq
MIRT1309251	hsa-miR-19b	CLIP-seq
MIRT1309252	hsa-miR-206	CLIP-seq
MIRT1309253	hsa-miR-21	CLIP-seq
MIRT1309254	hsa-miR-2115	CLIP-seq
MIRT1309255	hsa-miR-224	CLIP-seq
MIRT1309256	hsa-miR-2276	CLIP-seq
MIRT1309257	hsa-miR-2355-3p	CLIP-seq
MIRT1309258	hsa-miR-23a	CLIP-seq
MIRT1309259	hsa-miR-23b	CLIP-seq
MIRT1309260	hsa-miR-2909	CLIP-seq
MIRT1309261	hsa-miR-298	CLIP-seq
MIRT1309262	hsa-miR-300	CLIP-seq
MIRT1309263	hsa-miR-3065-5p	CLIP-seq
MIRT1309264	hsa-miR-3120-3p	CLIP-seq
MIRT1309265	hsa-miR-3125	CLIP-seq
MIRT1309266	hsa-miR-3126-3p	CLIP-seq
MIRT1309267	hsa-miR-3129-3p	CLIP-seq
MIRT1309268	hsa-miR-3136-5p	CLIP-seq
MIRT1309269	hsa-miR-3143	CLIP-seq
MIRT1309270	hsa-miR-3148	CLIP-seq
MIRT1309271	hsa-miR-3150a-5p	CLIP-seq
MIRT1309272	hsa-miR-3150b-5p	CLIP-seq
MIRT1309273	hsa-miR-323-3p	CLIP-seq
MIRT1309274	hsa-miR-331-3p	CLIP-seq
MIRT1309275	hsa-miR-335	CLIP-seq
MIRT1309276	hsa-miR-338-5p	CLIP-seq
MIRT1309277	hsa-miR-3609	CLIP-seq
MIRT1309278	hsa-miR-374c	CLIP-seq
MIRT1309279	hsa-miR-381	CLIP-seq
MIRT1309280	hsa-miR-3913-3p	CLIP-seq
MIRT1309281	hsa-miR-3914	CLIP-seq
MIRT1309282	hsa-miR-3916	CLIP-seq
MIRT1309283	hsa-miR-412	CLIP-seq
MIRT1309284	hsa-miR-4439	CLIP-seq
MIRT1309285	hsa-miR-4457	CLIP-seq
MIRT1309286	hsa-miR-4471	CLIP-seq
MIRT1309287	hsa-miR-4477b	CLIP-seq
MIRT1309288	hsa-miR-4496	CLIP-seq
MIRT1309289	hsa-miR-4517	CLIP-seq
MIRT1309290	hsa-miR-4524	CLIP-seq
MIRT1309291	hsa-miR-4525	CLIP-seq
MIRT1309292	hsa-miR-455-5p	CLIP-seq
MIRT1309293	hsa-miR-4646-3p	CLIP-seq
MIRT1309294	hsa-miR-4665-5p	CLIP-seq
MIRT1309295	hsa-miR-4667-5p	CLIP-seq
MIRT1309296	hsa-miR-4668-3p	CLIP-seq
MIRT1309297	hsa-miR-4700-5p	CLIP-seq
MIRT1309298	hsa-miR-4723-5p	CLIP-seq
MIRT1309299	hsa-miR-4731-3p	CLIP-seq
MIRT1309300	hsa-miR-4732-3p	CLIP-seq
MIRT1309301	hsa-miR-4762-5p	CLIP-seq
MIRT1309302	hsa-miR-4764-3p	CLIP-seq
MIRT1309303	hsa-miR-4777-5p	CLIP-seq
MIRT1309304	hsa-miR-4786-3p	CLIP-seq
MIRT1309305	hsa-miR-4789-5p	CLIP-seq
MIRT1309306	hsa-miR-4801	CLIP-seq
MIRT1309307	hsa-miR-489	CLIP-seq
MIRT1309308	hsa-miR-491-3p	CLIP-seq
MIRT1309309	hsa-miR-513b	CLIP-seq
MIRT1309310	hsa-miR-516a-3p	CLIP-seq
MIRT1309311	hsa-miR-518a-5p	CLIP-seq
MIRT1309312	hsa-miR-518d-5p	CLIP-seq
MIRT1309313	hsa-miR-519b-5p	CLIP-seq
MIRT1309314	hsa-miR-519c-5p	CLIP-seq
MIRT1309315	hsa-miR-520c-5p	CLIP-seq
MIRT1309316	hsa-miR-526a	CLIP-seq
MIRT1309317	hsa-miR-527	CLIP-seq
MIRT1309318	hsa-miR-543	CLIP-seq
MIRT1309319	hsa-miR-548ag	CLIP-seq
MIRT1309320	hsa-miR-548ah	CLIP-seq
MIRT1309321	hsa-miR-548ai	CLIP-seq
MIRT1309322	hsa-miR-548c-3p	CLIP-seq
MIRT1309323	hsa-miR-548n	CLIP-seq
MIRT1309324	hsa-miR-548t	CLIP-seq
MIRT1309325	hsa-miR-549	CLIP-seq
MIRT1309326	hsa-miR-563	CLIP-seq
MIRT1309327	hsa-miR-577	CLIP-seq
MIRT1309328	hsa-miR-590-5p	CLIP-seq
MIRT1309329	hsa-miR-605	CLIP-seq
MIRT1309330	hsa-miR-613	CLIP-seq
MIRT1309331	hsa-miR-624	CLIP-seq
MIRT1309332	hsa-miR-625	CLIP-seq
MIRT1309333	hsa-miR-637	CLIP-seq
MIRT1309334	hsa-miR-640	CLIP-seq
MIRT1309335	hsa-miR-653	CLIP-seq
MIRT1309336	hsa-miR-655	CLIP-seq
MIRT1309337	hsa-miR-656	CLIP-seq
MIRT1309338	hsa-miR-659	CLIP-seq
MIRT1309339	hsa-miR-676	CLIP-seq
MIRT1309340	hsa-miR-877	CLIP-seq
MIRT1309341	hsa-miR-9	CLIP-seq
MIRT1309342	hsa-miR-943	CLIP-seq
MIRT2091828	hsa-miR-1184	CLIP-seq
MIRT2091829	hsa-miR-1205	CLIP-seq
MIRT2091830	hsa-miR-128	CLIP-seq
MIRT2091831	hsa-miR-1297	CLIP-seq
MIRT2091832	hsa-miR-1303	CLIP-seq
MIRT2091833	hsa-miR-1305	CLIP-seq
MIRT1309247	hsa-miR-144	CLIP-seq
MIRT1309254	hsa-miR-2115	CLIP-seq
MIRT1309255	hsa-miR-224	CLIP-seq
MIRT2091834	hsa-miR-26a	CLIP-seq
MIRT2091835	hsa-miR-26b	CLIP-seq
MIRT2091836	hsa-miR-27a	CLIP-seq
MIRT2091837	hsa-miR-27b	CLIP-seq
MIRT2091838	hsa-miR-3115	CLIP-seq
MIRT1309268	hsa-miR-3136-5p	CLIP-seq
MIRT2091839	hsa-miR-3158-5p	CLIP-seq
MIRT2091840	hsa-miR-3920	CLIP-seq
MIRT2091841	hsa-miR-3940-5p	CLIP-seq
MIRT2091842	hsa-miR-4436b-5p	CLIP-seq
MIRT1309284	hsa-miR-4439	CLIP-seq
MIRT2091843	hsa-miR-4465	CLIP-seq
MIRT2091844	hsa-miR-4477a	CLIP-seq
MIRT2091845	hsa-miR-4507	CLIP-seq
MIRT1309289	hsa-miR-4517	CLIP-seq
MIRT2091846	hsa-miR-452	CLIP-seq
MIRT2091847	hsa-miR-4676-3p	CLIP-seq
MIRT2091848	hsa-miR-4686	CLIP-seq
MIRT2091849	hsa-miR-4691-5p	CLIP-seq
MIRT2091850	hsa-miR-4693-5p	CLIP-seq
MIRT2091851	hsa-miR-4698	CLIP-seq
MIRT2091852	hsa-miR-4699-3p	CLIP-seq
MIRT1309301	hsa-miR-4762-5p	CLIP-seq
MIRT2091853	hsa-miR-498	CLIP-seq
MIRT2091854	hsa-miR-499-3p	CLIP-seq
MIRT2091855	hsa-miR-499a-3p	CLIP-seq
MIRT2091856	hsa-miR-513a-5p	CLIP-seq
MIRT2091857	hsa-miR-539	CLIP-seq
MIRT2091858	hsa-miR-548g	CLIP-seq
MIRT1309326	hsa-miR-563	CLIP-seq
MIRT2091859	hsa-miR-586	CLIP-seq
MIRT1309338	hsa-miR-659	CLIP-seq
MIRT1309341	hsa-miR-9	CLIP-seq
MIRT1309342	hsa-miR-943	CLIP-seq
MIRT2316318	hsa-miR-1179	CLIP-seq
MIRT1309243	hsa-miR-1182	CLIP-seq
MIRT2316319	hsa-miR-1243	CLIP-seq
MIRT1309246	hsa-miR-1292	CLIP-seq
MIRT2316320	hsa-miR-1324	CLIP-seq
MIRT1309247	hsa-miR-144	CLIP-seq
MIRT1309248	hsa-miR-155	CLIP-seq
MIRT1309254	hsa-miR-2115	CLIP-seq
MIRT1309255	hsa-miR-224	CLIP-seq
MIRT1309258	hsa-miR-23a	CLIP-seq
MIRT1309259	hsa-miR-23b	CLIP-seq
MIRT2091836	hsa-miR-27a	CLIP-seq
MIRT2091837	hsa-miR-27b	CLIP-seq
MIRT1309260	hsa-miR-2909	CLIP-seq
MIRT1309268	hsa-miR-3136-5p	CLIP-seq
MIRT2316321	hsa-miR-3145-3p	CLIP-seq
MIRT2316322	hsa-miR-330-3p	CLIP-seq
MIRT2316323	hsa-miR-3613-5p	CLIP-seq
MIRT2316324	hsa-miR-3616-5p	CLIP-seq
MIRT2316325	hsa-miR-3647-5p	CLIP-seq
MIRT2316326	hsa-miR-3665	CLIP-seq
MIRT2316327	hsa-miR-3689a-5p	CLIP-seq
MIRT2316328	hsa-miR-3689b	CLIP-seq
MIRT2316329	hsa-miR-3689e	CLIP-seq
MIRT2316330	hsa-miR-3689f	CLIP-seq
MIRT2316331	hsa-miR-3909	CLIP-seq
MIRT1309280	hsa-miR-3913-3p	CLIP-seq
MIRT2316332	hsa-miR-3945	CLIP-seq
MIRT1309283	hsa-miR-412	CLIP-seq
MIRT2316333	hsa-miR-4431	CLIP-seq
MIRT2091842	hsa-miR-4436b-5p	CLIP-seq
MIRT1309284	hsa-miR-4439	CLIP-seq
MIRT1309285	hsa-miR-4457	CLIP-seq
MIRT1309286	hsa-miR-4471	CLIP-seq
MIRT2091844	hsa-miR-4477a	CLIP-seq
MIRT2316334	hsa-miR-4503	CLIP-seq
MIRT2316335	hsa-miR-450b-5p	CLIP-seq
MIRT1309289	hsa-miR-4517	CLIP-seq
MIRT1309295	hsa-miR-4667-5p	CLIP-seq
MIRT2091849	hsa-miR-4691-5p	CLIP-seq
MIRT1309297	hsa-miR-4700-5p	CLIP-seq
MIRT1309301	hsa-miR-4762-5p	CLIP-seq
MIRT2316336	hsa-miR-4795-5p	CLIP-seq
MIRT2316337	hsa-miR-486-3p	CLIP-seq
MIRT1309307	hsa-miR-489	CLIP-seq
MIRT1309309	hsa-miR-513b	CLIP-seq
MIRT1309310	hsa-miR-516a-3p	CLIP-seq
MIRT2316338	hsa-miR-520d-5p	CLIP-seq
MIRT2316339	hsa-miR-524-5p	CLIP-seq
MIRT1309326	hsa-miR-563	CLIP-seq
MIRT2316340	hsa-miR-573	CLIP-seq
MIRT2091859	hsa-miR-586	CLIP-seq
MIRT2316341	hsa-miR-601	CLIP-seq
MIRT1309333	hsa-miR-637	CLIP-seq
MIRT1309334	hsa-miR-640	CLIP-seq
MIRT1309338	hsa-miR-659	CLIP-seq
MIRT1309341	hsa-miR-9	CLIP-seq
MIRT1309342	hsa-miR-943	CLIP-seq
MIRT2091828	hsa-miR-1184	CLIP-seq
MIRT2091829	hsa-miR-1205	CLIP-seq
MIRT2091830	hsa-miR-128	CLIP-seq
MIRT1309247	hsa-miR-144	CLIP-seq
MIRT2091836	hsa-miR-27a	CLIP-seq
MIRT2091837	hsa-miR-27b	CLIP-seq
MIRT2091839	hsa-miR-3158-5p	CLIP-seq
MIRT2091846	hsa-miR-452	CLIP-seq
MIRT2091847	hsa-miR-4676-3p	CLIP-seq
MIRT2091848	hsa-miR-4686	CLIP-seq
MIRT2091850	hsa-miR-4693-5p	CLIP-seq
MIRT2091852	hsa-miR-4699-3p	CLIP-seq
MIRT2091833	hsa-miR-1305	CLIP-seq
MIRT2458315	hsa-miR-4446-5p	CLIP-seq
MIRT2458316	hsa-miR-4755-5p	CLIP-seq
MIRT2458317	hsa-miR-511	CLIP-seq
MIRT1309241	hsa-miR-1	CLIP-seq
MIRT2316318	hsa-miR-1179	CLIP-seq
MIRT2612463	hsa-miR-1183	CLIP-seq
MIRT2091828	hsa-miR-1184	CLIP-seq
MIRT2612464	hsa-miR-1193	CLIP-seq
MIRT2091829	hsa-miR-1205	CLIP-seq
MIRT2316319	hsa-miR-1243	CLIP-seq
MIRT2091830	hsa-miR-128	CLIP-seq
MIRT2091831	hsa-miR-1297	CLIP-seq
MIRT2091832	hsa-miR-1303	CLIP-seq
MIRT2091833	hsa-miR-1305	CLIP-seq
MIRT1309247	hsa-miR-144	CLIP-seq
MIRT2612465	hsa-miR-205	CLIP-seq
MIRT1309252	hsa-miR-206	CLIP-seq
MIRT2612466	hsa-miR-2113	CLIP-seq
MIRT1309257	hsa-miR-2355-3p	CLIP-seq
MIRT2091834	hsa-miR-26a	CLIP-seq
MIRT2091835	hsa-miR-26b	CLIP-seq
MIRT2091836	hsa-miR-27a	CLIP-seq
MIRT2091837	hsa-miR-27b	CLIP-seq
MIRT2091838	hsa-miR-3115	CLIP-seq
MIRT1309264	hsa-miR-3120-3p	CLIP-seq
MIRT1309270	hsa-miR-3148	CLIP-seq
MIRT1309271	hsa-miR-3150a-5p	CLIP-seq
MIRT1309272	hsa-miR-3150b-5p	CLIP-seq
MIRT2091839	hsa-miR-3158-5p	CLIP-seq
MIRT2612467	hsa-miR-3163	CLIP-seq
MIRT2612468	hsa-miR-3171	CLIP-seq
MIRT1309274	hsa-miR-331-3p	CLIP-seq
MIRT2612469	hsa-miR-340	CLIP-seq
MIRT2316324	hsa-miR-3616-5p	CLIP-seq
MIRT2612470	hsa-miR-3646	CLIP-seq
MIRT2316325	hsa-miR-3647-5p	CLIP-seq
MIRT2091840	hsa-miR-3920	CLIP-seq
MIRT2091841	hsa-miR-3940-5p	CLIP-seq
MIRT2612471	hsa-miR-410	CLIP-seq
MIRT2612472	hsa-miR-4270	CLIP-seq
MIRT2612473	hsa-miR-4272	CLIP-seq
MIRT2612474	hsa-miR-4274	CLIP-seq
MIRT2612475	hsa-miR-4282	CLIP-seq
MIRT2316333	hsa-miR-4431	CLIP-seq
MIRT2612476	hsa-miR-4441	CLIP-seq
MIRT2091843	hsa-miR-4465	CLIP-seq
MIRT2091844	hsa-miR-4477a	CLIP-seq
MIRT1309287	hsa-miR-4477b	CLIP-seq
MIRT1309288	hsa-miR-4496	CLIP-seq
MIRT2091845	hsa-miR-4507	CLIP-seq
MIRT2316335	hsa-miR-450b-5p	CLIP-seq
MIRT2091846	hsa-miR-452	CLIP-seq
MIRT2612477	hsa-miR-4639-3p	CLIP-seq
MIRT2612478	hsa-miR-4645-3p	CLIP-seq
MIRT1309293	hsa-miR-4646-3p	CLIP-seq
MIRT2612479	hsa-miR-4652-3p	CLIP-seq
MIRT1309295	hsa-miR-4667-5p	CLIP-seq
MIRT2091847	hsa-miR-4676-3p	CLIP-seq
MIRT2091848	hsa-miR-4686	CLIP-seq
MIRT2091850	hsa-miR-4693-5p	CLIP-seq
MIRT2091851	hsa-miR-4698	CLIP-seq
MIRT2091852	hsa-miR-4699-3p	CLIP-seq
MIRT1309297	hsa-miR-4700-5p	CLIP-seq
MIRT2612480	hsa-miR-4709-5p	CLIP-seq
MIRT1309300	hsa-miR-4732-3p	CLIP-seq
MIRT1309301	hsa-miR-4762-5p	CLIP-seq
MIRT1309302	hsa-miR-4764-3p	CLIP-seq
MIRT2612481	hsa-miR-4773	CLIP-seq
MIRT2612482	hsa-miR-4778-5p	CLIP-seq
MIRT2316336	hsa-miR-4795-5p	CLIP-seq
MIRT2612483	hsa-miR-4799-5p	CLIP-seq
MIRT2316337	hsa-miR-486-3p	CLIP-seq
MIRT2091853	hsa-miR-498	CLIP-seq
MIRT2091854	hsa-miR-499-3p	CLIP-seq
MIRT2091855	hsa-miR-499a-3p	CLIP-seq
MIRT2091857	hsa-miR-539	CLIP-seq
MIRT2091858	hsa-miR-548g	CLIP-seq
MIRT2612484	hsa-miR-550a	CLIP-seq
MIRT1309326	hsa-miR-563	CLIP-seq
MIRT2316340	hsa-miR-573	CLIP-seq
MIRT1309327	hsa-miR-577	CLIP-seq
MIRT2091859	hsa-miR-586	CLIP-seq
MIRT2316341	hsa-miR-601	CLIP-seq
MIRT1309330	hsa-miR-613	CLIP-seq
MIRT2612485	hsa-miR-630	CLIP-seq
MIRT1309333	hsa-miR-637	CLIP-seq
MIRT1309339	hsa-miR-676	CLIP-seq
MIRT2316318	hsa-miR-1179	CLIP-seq
MIRT2612463	hsa-miR-1183	CLIP-seq
MIRT2091828	hsa-miR-1184	CLIP-seq
MIRT2612464	hsa-miR-1193	CLIP-seq
MIRT2091829	hsa-miR-1205	CLIP-seq
MIRT2091830	hsa-miR-128	CLIP-seq
MIRT2091831	hsa-miR-1297	CLIP-seq
MIRT2091833	hsa-miR-1305	CLIP-seq
MIRT1309247	hsa-miR-144	CLIP-seq
MIRT2612465	hsa-miR-205	CLIP-seq
MIRT2612466	hsa-miR-2113	CLIP-seq
MIRT2091834	hsa-miR-26a	CLIP-seq
MIRT2091835	hsa-miR-26b	CLIP-seq
MIRT2091836	hsa-miR-27a	CLIP-seq
MIRT2091837	hsa-miR-27b	CLIP-seq
MIRT2091838	hsa-miR-3115	CLIP-seq
MIRT1309264	hsa-miR-3120-3p	CLIP-seq
MIRT1309270	hsa-miR-3148	CLIP-seq
MIRT2091839	hsa-miR-3158-5p	CLIP-seq
MIRT2612467	hsa-miR-3163	CLIP-seq
MIRT2612468	hsa-miR-3171	CLIP-seq
MIRT1309274	hsa-miR-331-3p	CLIP-seq
MIRT2612469	hsa-miR-340	CLIP-seq
MIRT2316324	hsa-miR-3616-5p	CLIP-seq
MIRT2612470	hsa-miR-3646	CLIP-seq
MIRT2316325	hsa-miR-3647-5p	CLIP-seq
MIRT2091840	hsa-miR-3920	CLIP-seq
MIRT2091841	hsa-miR-3940-5p	CLIP-seq
MIRT2612471	hsa-miR-410	CLIP-seq
MIRT2612472	hsa-miR-4270	CLIP-seq
MIRT2612473	hsa-miR-4272	CLIP-seq
MIRT2612474	hsa-miR-4274	CLIP-seq
MIRT2612475	hsa-miR-4282	CLIP-seq
MIRT2316333	hsa-miR-4431	CLIP-seq
MIRT2612476	hsa-miR-4441	CLIP-seq
MIRT2091843	hsa-miR-4465	CLIP-seq
MIRT2091844	hsa-miR-4477a	CLIP-seq
MIRT1309287	hsa-miR-4477b	CLIP-seq
MIRT1309288	hsa-miR-4496	CLIP-seq
MIRT2091845	hsa-miR-4507	CLIP-seq
MIRT2091846	hsa-miR-452	CLIP-seq
MIRT2612477	hsa-miR-4639-3p	CLIP-seq
MIRT2612478	hsa-miR-4645-3p	CLIP-seq
MIRT2612479	hsa-miR-4652-3p	CLIP-seq
MIRT2091847	hsa-miR-4676-3p	CLIP-seq
MIRT2091848	hsa-miR-4686	CLIP-seq
MIRT2091850	hsa-miR-4693-5p	CLIP-seq
MIRT2091851	hsa-miR-4698	CLIP-seq
MIRT2091852	hsa-miR-4699-3p	CLIP-seq
MIRT2612480	hsa-miR-4709-5p	CLIP-seq
MIRT1309300	hsa-miR-4732-3p	CLIP-seq
MIRT1309301	hsa-miR-4762-5p	CLIP-seq
MIRT1309302	hsa-miR-4764-3p	CLIP-seq
MIRT2612481	hsa-miR-4773	CLIP-seq
MIRT2612482	hsa-miR-4778-5p	CLIP-seq
MIRT2316336	hsa-miR-4795-5p	CLIP-seq
MIRT2612483	hsa-miR-4799-5p	CLIP-seq
MIRT2091853	hsa-miR-498	CLIP-seq
MIRT2091854	hsa-miR-499-3p	CLIP-seq
MIRT2091855	hsa-miR-499a-3p	CLIP-seq
MIRT2091858	hsa-miR-548g	CLIP-seq
MIRT2612484	hsa-miR-550a	CLIP-seq
MIRT1309326	hsa-miR-563	CLIP-seq
MIRT2316340	hsa-miR-573	CLIP-seq
MIRT1309327	hsa-miR-577	CLIP-seq
MIRT2316341	hsa-miR-601	CLIP-seq
MIRT2612485	hsa-miR-630	CLIP-seq

Transcription factors

Show/Hide all(1)

Transcription factor	Regulation	Reference
XPC	Repression	23751493

Show/Hide all(33)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000209	Process	Protein polyubiquitination	IEA
GO:0005515	Function	Protein binding	IPI	16601693, 19549727, 19690564, 20936779, 21516116, 25260751, 25416956, 29892012, 31515488, 32707033, 32814053, 33961781
GO:0005634	Component	Nucleus	IBA
GO:0005634	Component	Nucleus	IEA
GO:0005654	Component	Nucleoplasm	IDA
GO:0005654	Component	Nucleoplasm	IEA
GO:0005654	Component	Nucleoplasm	TAS
GO:0005737	Component	Cytoplasm	IBA
GO:0005737	Component	Cytoplasm	IEA
GO:0005829	Component	Cytosol	IDA
GO:0006281	Process	DNA repair	IEA
GO:0006511	Process	Ubiquitin-dependent protein catabolic process	IBA
GO:0006511	Process	Ubiquitin-dependent protein catabolic process	IEA
GO:0006974	Process	DNA damage response	IEA
GO:0007389	Process	Pattern specification process	IEA
GO:0008270	Function	Zinc ion binding	IEA
GO:0016567	Process	Protein ubiquitination	IEA
GO:0016567	Process	Protein ubiquitination	IMP	16601693
GO:0016605	Component	PML body	IEA
GO:0016740	Function	Transferase activity	IEA
GO:0030511	Process	Positive regulation of transforming growth factor beta receptor signaling pathway	IBA
GO:0030511	Process	Positive regulation of transforming growth factor beta receptor signaling pathway	IEA
GO:0031398	Process	Positive regulation of protein ubiquitination	IEA
GO:0032184	Function	SUMO polymer binding	IBA
GO:0032184	Function	SUMO polymer binding	IDA	23086935
GO:0032991	Component	Protein-containing complex	IEA
GO:0046332	Function	SMAD binding	IBA
GO:0046872	Function	Metal ion binding	IEA
GO:0061630	Function	Ubiquitin protein ligase activity	IBA
GO:0061630	Function	Ubiquitin protein ligase activity	IEA
GO:0061630	Function	Ubiquitin protein ligase activity	IMP	16601693
GO:0061630	Function	Ubiquitin protein ligase activity	TAS
GO:0070911	Process	Global genome nucleotide-excision repair	TAS

MIM	HGNC	e!Ensembl
605840	17384	ENSG00000157450

Protein

UniProt ID

Q6ZNA4

Protein name

E3 ubiquitin-protein ligase Arkadia (EC 2.3.2.27) (RING finger protein 111) (hRNF111) (RING-type E3 ubiquitin transferase Arkadia)

Protein function

E3 ubiquitin-protein ligase (PubMed:26656854). Required for mesoderm patterning during embryonic development (By similarity). Acts as an enhancer of the transcriptional responses of the SMAD2/SMAD3 effectors, which are activated downstream of BM

PDB

2KIZ , 5LG0 , 5LG7 , 7P2K

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF15303	RNF111_N	18 → 292	E3 ubiquitin-protein ligase Arkadia N-terminus	Family
PF13639	zf-RING_2	940 → 983	Ring finger domain	Domain

Tissue specificity

TISSUE SPECIFICITY: Broadly expressed. {ECO:0000269|PubMed:14657019}.

Sequence

MSQWTPEYNELYTLKVDMKSEIPSDAPKTQESLKGILLHPEPIGAAKSFPAGVEMINSKV
GNEFSHLCDDSQKQEKEMNGNQQEQEKSLVVRKKRKSQQAGPSYVQNCVKENQGILGLRQ
HLGTPSDEDNDSSFSDCLSSPSSSLHFGDSDTVTSDEDKEVSVRHSQTILNAKSRSHSAR
SHKWPRTETESVSGLLMKRPCLHGSSLRRLPCRKRFVKNNSSQRTQKQKERILMQRKKRE
VLARRKYALLPSSSSSSENDLSSESSSSSSTEGEEDLFVSASENHQNNPAVPSGSIDEDV
VVIEASSTPQVTANEEINVTSTDSEVEIVTVGESYRSRSTLGHSRSHWSQGSSSHASRPQ
EPRNRSRISTVIQPLRQNAAEVVDLTVDEDEPTVVPTTSARMESQATSASINNSNPSTSE
QASDTASAVTSSQPSTVSETSATLTSNSTTGTSIGDDSRRTTSSAVTETGPPAMPRLPSC
CPQHSPCGGSSQNHHALGHPHTSCFQQHGHHFQHHHHHHHTPHPAVPVSPSFSDPACPVE
RPPQVQAPCGANSSSGTSYHEQQALPVDLSNSGIRSHGSGSFHGASAFDPCCPVSSSRAA
IFGHQAAAAAPSQPLSSIDGYGSSMVAQPQPQPPPQPSLSSCRHYMPPPYASLTRPLHHQ
ASACPHSHGNPPPQTQPPPQVDYVIPHPVHAFHSQISSHATSHPVAPPPPTHLASTAAPI
PQHLPPTHQPISHHIPATAPPAQRLHPHEVMQRMEVQRRRMMQHPTRAHERPPPHPHRMH
PNYGHGHHIHVPQTMSSHPRQAPERSAWELGIEAGVTAATYTPGALHPHLAHYHAPPRLH
HLQLGALPLMVPDMAGYPHIRYISSGLDGTSFRGPFRGNFEELIHLEERLGNVNRGASQG
TIERCTYPHKYKKVTTDWFSQRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRRLPC
MHLFHQVCVDQWLITNKKCPICRVDIEAQLPSES

Sequence length

994

Interactions

View interactions

	Reactome
			SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription Formation of Incision Complex in GG-NER Antigen processing: Ubiquitination & Proteasome degradation

Show/Hide Unknown Diseases (2)

Disease merge term	Disease name	Evidence	References	Source
Unknown Includes: (1) ClinVar NON-pathogenic variants (Uncertain, Benign, Conflicting, VUS), (2) GenCC associations, (3) GWAS associations, (4) CBGDA evidence-based associations. NOTE: Diseases with pathogenic evidence are excluded to avoid conflicts.
Dermatitis	Atopic dermatitis	N/A	N/A	GWAS
Schizophrenia	Schizophrenia	N/A	N/A	GWAS

Show/Hide Text Mining Associations (5)

Disease Name	Relationship Type	References
Associations from Text Mining Disease associations identified through Pubtator
Asthma	Associate	31213409
Carcinoma Renal Cell	Associate	26522722
Eczema	Associate	31213409
Neoplasms	Associate	26522722, 33000178
Stomach Neoplasms	Associate	33000178

RNF111 (ring finger protein 111)