Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
5476
Gene name Gene Name - the full gene name approved by the HGNC.
Cathepsin A
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
CTSA
Synonyms (NCBI Gene) Gene synonyms aliases
GLB2, GSL, NGBE, PPCA, PPGB
Chromosome Chromosome number
20
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
20q13.12
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a member of the peptidase S10 family of serine carboxypeptidases. Alternative splicing results in multiple transcript variants, at least one of which encodes a preproprotein that is proteolytically processed to generate two chains that c
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs137854540 T>G Pathogenic Coding sequence variant, non coding transcript variant, missense variant
rs137854543 A>G Pathogenic Coding sequence variant, non coding transcript variant, missense variant
rs137854544 T>A Pathogenic Coding sequence variant, non coding transcript variant, missense variant
rs137854546 T>C Pathogenic Coding sequence variant, non coding transcript variant, missense variant
rs137854547 G>A Pathogenic Coding sequence variant, non coding transcript variant, missense variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT020678 hsa-miR-155-5p Proteomics 18668040
MIRT051616 hsa-let-7e-5p CLASH 23622248
MIRT050910 hsa-miR-17-5p CLASH 23622248
MIRT050564 hsa-miR-20a-5p CLASH 23622248
MIRT045850 hsa-miR-130a-3p CLASH 23622248
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0004180 Function Carboxypeptidase activity IEA
GO:0004180 Function Carboxypeptidase activity TAS 2244901
GO:0004185 Function Serine-type carboxypeptidase activity IBA
GO:0004185 Function Serine-type carboxypeptidase activity IEA
GO:0004185 Function Serine-type carboxypeptidase activity IMP 1907282, 12505983
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
613111 9251 ENSG00000064601
Protein
UniProt ID P10619
Protein name Lysosomal protective protein (EC 3.4.16.5) (Carboxypeptidase C) (Carboxypeptidase L) (Cathepsin A) (Protective protein cathepsin A) (PPCA) (Protective protein for beta-galactosidase) [Cleaved into: Lysosomal protective protein 32 kDa chain; Lysosomal prot
Protein function Protective protein appears to be essential for both the activity of beta-galactosidase and neuraminidase, it associates with these enzymes and exerts a protective function necessary for their stability and activity. This protein is also a carbox
PDB 1IVY , 3BP4 , 3BP7 , 3BXN , 4AZ0 , 4AZ3 , 4CI9 , 4CIA , 4CIB , 4MWS , 4MWT , 6WIA
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00450 Peptidase_S10 39 477 Serine carboxypeptidase Domain
Sequence
Sequence length 480
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Lysosome
Renin-angiotensin system
  Glycosphingolipid metabolism
MHC class II antigen presentation
Sialic acid metabolism
Defective NEU1 causes sialidosis
Neutrophil degranulation
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Associated diseases Disease associations categorized as Causal (pathogenic variants), Unknown (uncertain genetic evidence), or Text Mining (literature-based associations)
Causal Diseases caused by PATHOGENIC or LIKELY PATHOGENIC variants from ClinVar only
Disease merge term Disease name dbSNP ID References
Galactosialidosis Galactosialidosis, late infantile, Galactosialidosis, adult, Galactosialidosis, early infantile rs137854548, rs769812697, rs137854549, rs1337995343, rs137854540, rs786200859, rs137854544, rs137854546 N/A
Nonimmune Hydrops Fetalis non-immune hydrops fetalis rs786205670 N/A
Associations from Text Mining Disease associations identified through Pubtator
Disease Name Relationship Type References
Adenocarcinoma of Lung Associate 32323791
Atrial Fibrillation Inhibit 28306170
Carcinogenesis Associate 37287981
Carcinoma Hepatocellular Associate 32968147, 34272452, 37287981, 38114725
Charcot Marie Tooth Disease Associate 28860329
Diabetes Mellitus Type 2 Associate 8094595
Hereditary Breast and Ovarian Cancer Syndrome Associate 23479608
Immunologic Deficiency Syndromes Associate 9435242
Infections Associate 15780141
Leukemia Myeloid Acute Associate 12393713, 22411838, 35168327