Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
5476
Gene name Gene Name - the full gene name approved by the HGNC.
Cathepsin A
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
CTSA
Synonyms (NCBI Gene) Gene synonyms aliases
GLB2, GSL, NGBE, PPCA, PPGB
Disease Acronyms (UniProt) Disease acronyms from UniProt database
GSL
Chromosome Chromosome number
20
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
20q13.12
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a member of the peptidase S10 family of serine carboxypeptidases. Alternative splicing results in multiple transcript variants, at least one of which encodes a preproprotein that is proteolytically processed to generate two chains that c
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs137854540 T>G Pathogenic Coding sequence variant, non coding transcript variant, missense variant
rs137854543 A>G Pathogenic Coding sequence variant, non coding transcript variant, missense variant
rs137854544 T>A Pathogenic Coding sequence variant, non coding transcript variant, missense variant
rs137854546 T>C Pathogenic Coding sequence variant, non coding transcript variant, missense variant
rs137854547 G>A Pathogenic Coding sequence variant, non coding transcript variant, missense variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT020678 hsa-miR-155-5p Proteomics 18668040
MIRT051616 hsa-let-7e-5p CLASH 23622248
MIRT050910 hsa-miR-17-5p CLASH 23622248
MIRT050564 hsa-miR-20a-5p CLASH 23622248
MIRT045850 hsa-miR-130a-3p CLASH 23622248
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0004180 Function Carboxypeptidase activity TAS 2244901
GO:0004185 Function Serine-type carboxypeptidase activity IBA 21873635
GO:0004185 Function Serine-type carboxypeptidase activity IMP 12505983
GO:0005576 Component Extracellular region TAS
GO:0005764 Component Lysosome NAS 3136930
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
613111 9251 ENSG00000064601
Protein
UniProt ID P10619
Protein name Lysosomal protective protein (EC 3.4.16.5) (Carboxypeptidase C) (Carboxypeptidase L) (Cathepsin A) (Protective protein cathepsin A) (PPCA) (Protective protein for beta-galactosidase) [Cleaved into: Lysosomal protective protein 32 kDa chain; Lysosomal prot
Protein function Protective protein appears to be essential for both the activity of beta-galactosidase and neuraminidase, it associates with these enzymes and exerts a protective function necessary for their stability and activity. This protein is also a carbox
PDB 1IVY , 3BP4 , 3BP7 , 3BXN , 4AZ0 , 4AZ3 , 4CI9 , 4CIA , 4CIB , 4MWS , 4MWT , 6WIA
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00450 Peptidase_S10 39 477 Serine carboxypeptidase Domain
Sequence
Sequence length 480
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Lysosome
Renin-angiotensin system
  Glycosphingolipid metabolism
MHC class II antigen presentation
Sialic acid metabolism
Defective NEU1 causes sialidosis
Neutrophil degranulation
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Galactosialidosis GALACTOSIALIDOSIS rs137854540, rs786200859, rs137854544, rs137854546, rs137854548, rs769812697, rs137854549, rs1337995343 8514852, 7759227, 8968752, 24779613, 26259553, 24769197, 1756715, 10944848, 24357685, 16538002, 27604308
Hemangioma Hemangioma rs121917766
Hydrops fetalis Hydrops Fetalis, Non-Immune rs28935477, rs1131691986 26036949
Mental retardation Mild Mental Retardation, Intellectual Disability rs5742905, rs267607136, rs267607137, rs2131714307, rs267607038, rs267607042, rs80338685, rs137853127, rs80338815, rs28940893, rs387906309, rs121908096, rs121908099, rs587784365, rs121918315
View all (1024 more)
8968752, 24769197, 10944848
Associations from Text Mining
Disease Name Relationship Type References
Adenocarcinoma of Lung Associate 32323791
Atrial Fibrillation Inhibit 28306170
Carcinogenesis Associate 37287981
Carcinoma Hepatocellular Associate 32968147, 34272452, 37287981, 38114725
Charcot Marie Tooth Disease Associate 28860329
Diabetes Mellitus Type 2 Associate 8094595
Hereditary Breast and Ovarian Cancer Syndrome Associate 23479608
Immunologic Deficiency Syndromes Associate 9435242
Infections Associate 15780141
Leukemia Myeloid Acute Associate 12393713, 22411838, 35168327