Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene information from NCBI Gene database. Gene miRNA Gene ontology Other IDs Protein Associated diseases
Entrez ID	54753
Gene name	Zinc finger protein 853
Gene symbol	ZNF853
Synonyms (NCBI Gene)	-
Chromosome	7
Chromosome location	7p22.1

176

Show/Hide all (176)

miRTarBase ID	miRNA	Experiments	Reference
MIRT526578	hsa-miR-1272	PAR-CLIP	20371350
MIRT526577	hsa-miR-3682-3p	PAR-CLIP	20371350
MIRT526576	hsa-miR-8069	PAR-CLIP	20371350
MIRT526573	hsa-miR-8071	PAR-CLIP	20371350
MIRT526572	hsa-miR-6880-5p	PAR-CLIP	20371350
MIRT526571	hsa-miR-3165	PAR-CLIP	20371350
MIRT526568	hsa-miR-4502	PAR-CLIP	20371350
MIRT526578	hsa-miR-1272	PAR-CLIP	20371350
MIRT526577	hsa-miR-3682-3p	PAR-CLIP	20371350
MIRT526576	hsa-miR-8069	PAR-CLIP	20371350
MIRT526573	hsa-miR-8071	PAR-CLIP	20371350
MIRT526572	hsa-miR-6880-5p	PAR-CLIP	20371350
MIRT526571	hsa-miR-3165	PAR-CLIP	20371350
MIRT526570	hsa-miR-3190-3p	PAR-CLIP	20371350
MIRT526568	hsa-miR-4502	PAR-CLIP	20371350
MIRT526578	hsa-miR-1272	PAR-CLIP	20371350
MIRT526577	hsa-miR-3682-3p	PAR-CLIP	20371350
MIRT526576	hsa-miR-8069	PAR-CLIP	20371350
MIRT526573	hsa-miR-8071	PAR-CLIP	20371350
MIRT526572	hsa-miR-6880-5p	PAR-CLIP	20371350
MIRT526571	hsa-miR-3165	PAR-CLIP	20371350
MIRT526568	hsa-miR-4502	PAR-CLIP	20371350
MIRT526578	hsa-miR-1272	PAR-CLIP	22012620
MIRT526577	hsa-miR-3682-3p	PAR-CLIP	22012620
MIRT526576	hsa-miR-8069	PAR-CLIP	22012620
MIRT526575	hsa-miR-6828-5p	PAR-CLIP	22012620
MIRT526574	hsa-miR-671-5p	PAR-CLIP	22012620
MIRT526573	hsa-miR-8071	PAR-CLIP	22012620
MIRT526572	hsa-miR-6880-5p	PAR-CLIP	22012620
MIRT526571	hsa-miR-3165	PAR-CLIP	22012620
MIRT526570	hsa-miR-3190-3p	PAR-CLIP	22012620
MIRT526569	hsa-miR-6079	PAR-CLIP	22012620
MIRT526568	hsa-miR-4502	PAR-CLIP	22012620
MIRT526578	hsa-miR-1272	PAR-CLIP	20371350
MIRT526577	hsa-miR-3682-3p	PAR-CLIP	20371350
MIRT526576	hsa-miR-8069	PAR-CLIP	20371350
MIRT526573	hsa-miR-8071	PAR-CLIP	20371350
MIRT526572	hsa-miR-6880-5p	PAR-CLIP	20371350
MIRT526571	hsa-miR-3165	PAR-CLIP	20371350
MIRT526568	hsa-miR-4502	PAR-CLIP	20371350
MIRT526578	hsa-miR-1272	PAR-CLIP	20371350
MIRT526577	hsa-miR-3682-3p	PAR-CLIP	20371350
MIRT526576	hsa-miR-8069	PAR-CLIP	20371350
MIRT526573	hsa-miR-8071	PAR-CLIP	20371350
MIRT526572	hsa-miR-6880-5p	PAR-CLIP	20371350
MIRT526571	hsa-miR-3165	PAR-CLIP	20371350
MIRT526570	hsa-miR-3190-3p	PAR-CLIP	20371350
MIRT526568	hsa-miR-4502	PAR-CLIP	20371350
MIRT526578	hsa-miR-1272	PAR-CLIP	20371350
MIRT526577	hsa-miR-3682-3p	PAR-CLIP	20371350
MIRT526576	hsa-miR-8069	PAR-CLIP	20371350
MIRT526573	hsa-miR-8071	PAR-CLIP	20371350
MIRT526572	hsa-miR-6880-5p	PAR-CLIP	20371350
MIRT526571	hsa-miR-3165	PAR-CLIP	20371350
MIRT526568	hsa-miR-4502	PAR-CLIP	20371350
MIRT526578	hsa-miR-1272	PAR-CLIP	22012620
MIRT526577	hsa-miR-3682-3p	PAR-CLIP	22012620
MIRT526576	hsa-miR-8069	PAR-CLIP	22012620
MIRT526575	hsa-miR-6828-5p	PAR-CLIP	22012620
MIRT526574	hsa-miR-671-5p	PAR-CLIP	22012620
MIRT526573	hsa-miR-8071	PAR-CLIP	22012620
MIRT526572	hsa-miR-6880-5p	PAR-CLIP	22012620
MIRT526571	hsa-miR-3165	PAR-CLIP	22012620
MIRT526570	hsa-miR-3190-3p	PAR-CLIP	22012620
MIRT526569	hsa-miR-6079	PAR-CLIP	22012620
MIRT526568	hsa-miR-4502	PAR-CLIP	22012620
MIRT1542231	hsa-miR-1290	CLIP-seq
MIRT1542232	hsa-miR-130a	CLIP-seq
MIRT1542233	hsa-miR-130b	CLIP-seq
MIRT1542234	hsa-miR-134	CLIP-seq
MIRT1542235	hsa-miR-1343	CLIP-seq
MIRT1542236	hsa-miR-155	CLIP-seq
MIRT1542237	hsa-miR-19a	CLIP-seq
MIRT1542238	hsa-miR-19b	CLIP-seq
MIRT1542239	hsa-miR-301a	CLIP-seq
MIRT1542240	hsa-miR-301b	CLIP-seq
MIRT1542241	hsa-miR-3118	CLIP-seq
MIRT1542242	hsa-miR-3166	CLIP-seq
MIRT1542243	hsa-miR-3167	CLIP-seq
MIRT1542244	hsa-miR-3180-5p	CLIP-seq
MIRT1542245	hsa-miR-3657	CLIP-seq
MIRT1542246	hsa-miR-3666	CLIP-seq
MIRT1542247	hsa-miR-376c	CLIP-seq
MIRT1542248	hsa-miR-4295	CLIP-seq
MIRT1542249	hsa-miR-4436b-3p	CLIP-seq
MIRT1542250	hsa-miR-4449	CLIP-seq
MIRT1542251	hsa-miR-4488	CLIP-seq
MIRT1542252	hsa-miR-454	CLIP-seq
MIRT1542253	hsa-miR-4671-3p	CLIP-seq
MIRT1542254	hsa-miR-4697-5p	CLIP-seq
MIRT1542255	hsa-miR-486-3p	CLIP-seq
MIRT1542256	hsa-miR-507	CLIP-seq
MIRT1542257	hsa-miR-520a-5p	CLIP-seq
MIRT1542258	hsa-miR-525-5p	CLIP-seq
MIRT1542259	hsa-miR-557	CLIP-seq
MIRT1542260	hsa-miR-637	CLIP-seq
MIRT1542261	hsa-miR-876-5p	CLIP-seq
MIRT1542231	hsa-miR-1290	CLIP-seq
MIRT1542235	hsa-miR-1343	CLIP-seq
MIRT1542243	hsa-miR-3167	CLIP-seq
MIRT1542256	hsa-miR-507	CLIP-seq
MIRT1542259	hsa-miR-557	CLIP-seq
MIRT1542261	hsa-miR-876-5p	CLIP-seq
MIRT1542234	hsa-miR-134	CLIP-seq
MIRT1542241	hsa-miR-3118	CLIP-seq
MIRT1542251	hsa-miR-4488	CLIP-seq
MIRT1542254	hsa-miR-4697-5p	CLIP-seq
MIRT1542255	hsa-miR-486-3p	CLIP-seq
MIRT1542260	hsa-miR-637	CLIP-seq
MIRT2163544	hsa-miR-1271	CLIP-seq
MIRT2163545	hsa-miR-1275	CLIP-seq
MIRT1542231	hsa-miR-1290	CLIP-seq
MIRT1542235	hsa-miR-1343	CLIP-seq
MIRT2163546	hsa-miR-15a	CLIP-seq
MIRT2163547	hsa-miR-15b	CLIP-seq
MIRT2163548	hsa-miR-16	CLIP-seq
MIRT2163549	hsa-miR-182	CLIP-seq
MIRT2163550	hsa-miR-1908	CLIP-seq
MIRT2163551	hsa-miR-1913	CLIP-seq
MIRT2163552	hsa-miR-195	CLIP-seq
MIRT2163553	hsa-miR-2467-3p	CLIP-seq
MIRT1542243	hsa-miR-3167	CLIP-seq
MIRT2163554	hsa-miR-3189-5p	CLIP-seq
MIRT2163555	hsa-miR-3199	CLIP-seq
MIRT2163556	hsa-miR-324-3p	CLIP-seq
MIRT2163557	hsa-miR-424	CLIP-seq
MIRT2163558	hsa-miR-4515	CLIP-seq
MIRT2163559	hsa-miR-4525	CLIP-seq
MIRT2163560	hsa-miR-4652-5p	CLIP-seq
MIRT2163561	hsa-miR-4665-5p	CLIP-seq
MIRT2163562	hsa-miR-4723-5p	CLIP-seq
MIRT2163563	hsa-miR-4758-3p	CLIP-seq
MIRT2163564	hsa-miR-497	CLIP-seq
MIRT1542256	hsa-miR-507	CLIP-seq
MIRT1542259	hsa-miR-557	CLIP-seq
MIRT2163565	hsa-miR-625	CLIP-seq
MIRT1542260	hsa-miR-637	CLIP-seq
MIRT2163566	hsa-miR-663	CLIP-seq
MIRT1542261	hsa-miR-876-5p	CLIP-seq
MIRT2163567	hsa-miR-922	CLIP-seq
MIRT2163568	hsa-miR-96	CLIP-seq
MIRT1542231	hsa-miR-1290	CLIP-seq
MIRT1542232	hsa-miR-130a	CLIP-seq
MIRT1542233	hsa-miR-130b	CLIP-seq
MIRT1542234	hsa-miR-134	CLIP-seq
MIRT1542235	hsa-miR-1343	CLIP-seq
MIRT1542237	hsa-miR-19a	CLIP-seq
MIRT1542238	hsa-miR-19b	CLIP-seq
MIRT1542239	hsa-miR-301a	CLIP-seq
MIRT1542240	hsa-miR-301b	CLIP-seq
MIRT1542241	hsa-miR-3118	CLIP-seq
MIRT2382807	hsa-miR-3157-5p	CLIP-seq
MIRT1542243	hsa-miR-3167	CLIP-seq
MIRT1542246	hsa-miR-3666	CLIP-seq
MIRT1542247	hsa-miR-376c	CLIP-seq
MIRT2382808	hsa-miR-3977	CLIP-seq
MIRT1542248	hsa-miR-4295	CLIP-seq
MIRT2382809	hsa-miR-4493	CLIP-seq
MIRT1542252	hsa-miR-454	CLIP-seq
MIRT1542253	hsa-miR-4671-3p	CLIP-seq
MIRT2382810	hsa-miR-4691-3p	CLIP-seq
MIRT1542256	hsa-miR-507	CLIP-seq
MIRT1542259	hsa-miR-557	CLIP-seq
MIRT1542261	hsa-miR-876-5p	CLIP-seq
MIRT1542231	hsa-miR-1290	CLIP-seq
MIRT1542234	hsa-miR-134	CLIP-seq
MIRT1542235	hsa-miR-1343	CLIP-seq
MIRT1542241	hsa-miR-3118	CLIP-seq
MIRT1542243	hsa-miR-3167	CLIP-seq
MIRT1542251	hsa-miR-4488	CLIP-seq
MIRT1542254	hsa-miR-4697-5p	CLIP-seq
MIRT1542255	hsa-miR-486-3p	CLIP-seq
MIRT1542256	hsa-miR-507	CLIP-seq
MIRT1542259	hsa-miR-557	CLIP-seq
MIRT1542260	hsa-miR-637	CLIP-seq
MIRT1542261	hsa-miR-876-5p	CLIP-seq

Show/Hide all (6)

GO ID	Ontology	Definition	Evidence
GO:0000978	Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IBA
GO:0000981	Function	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0005634	Component	Nucleus	IEA
GO:0006357	Process	Regulation of transcription by RNA polymerase II	IBA
GO:0008270	Function	Zinc ion binding	IEA
GO:0046872	Function	Metal ion binding	IEA

MIM	HGNC	e!Ensembl
HGNC	N/A	HGNC

P0CG23

Protein name

Zinc finger protein 853

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF00096	zf-C2H2	485 → 507	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	513 → 535	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	541 → 563	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	569 → 591	Zinc finger, C2H2 type	Domain
PF00096	zf-C2H2	597 → 620	Zinc finger, C2H2 type	Domain

Sequence

MLHQPTPGNRGLTARMEVGPATETFVLELQCLEDGGPGPDTLSGGSGGSESQEEEEPQER
NSSPQRPAVSAPVGASEIAEETRPGQRELQLQQLEQQPEPQQQPQHEQLQQPQPHLELQQ
QPQQDGQQQLSQLQQEKHQSVHHQELKPELQLMHQQQQLQPQQVQEQQRLQQQQEQLQTQ
QAQEQQVLQQQEQLQQQVQEQQLLQQQQEQLQQQQLLQQQEQLQQQQFQQQQEQLQQQQQ
LLLLQQQGQLQQQLLQQQQAQLQQQLLEQQQAQLQQQLLLQQQEQLQQQQQQQLLQQQQE
QLQQQQLQPPPLEPEEEEEVELELMPVDLGSEQELEQQRQELERQQELERQQEQRQLQLK
LQEELQQLEQQLEQQQQQLEQQEVQLELTPVELGAQQQEVQLELTPVQPELQLELVPAAG
GGGAAVPGAPAAVVVAPPGYVVVQELMVLPAVAAPAVVAIPGPAGSAALTPARQRRRRRA
RDRPTICGECGKGFSRSTDLVRHQATHTGERPHRCGECGKGFSQHSNLVTHQRIHTGEKP
YACSYCAKRFSESSALVQHQRTHTGERPYACGDCGKRFSVSSNLLRHRRTHSGERPYVCE
DCGERFRHKVQIRRHERQLHGAGRSRGLGLLRASRPAALGGPARAEQAATATAPADKAL

Sequence length

659

Interactions

View interactions

Evidence Score: ★☆☆☆☆ Gene-disease association found in Text Mining only ★★☆☆☆ Found in Text Mining and Unknown/Other Associations ★★★☆☆ Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆ ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★ ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Show/Hide Unknown Diseases (3)

Phenotype Name	Clinical Significance	Source	Evidence Score
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
BREAST CARCINOMA	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
METABOLIC SYNDROME	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
TYPE 2 DIABETES MELLITUS	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations

Show/Hide Text Mining Associations (1)

Disease Name	Relationship Type	References	Evidence Score
Associations from Text MiningDisease associations identified through Pubtator
Carcinoma Squamous Cell	Associate	33960436	★★★★★ ★☆☆☆☆ Found in Text Mining only

ZNF853 (zinc finger protein 853)