Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
54665
Gene name Gene Name - the full gene name approved by the HGNC.
Round spermatid basic protein 1
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
RSBN1
Synonyms (NCBI Gene) Gene synonyms aliases
KDM9, ROSBIN
Chromosome Chromosome number
1
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
1p13.2
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT026162 hsa-miR-192-5p Microarray 19074876
MIRT699961 hsa-miR-138-1-3p HITS-CLIP 23313552
MIRT699960 hsa-miR-3926 HITS-CLIP 23313552
MIRT699959 hsa-miR-7111-3p HITS-CLIP 23313552
MIRT699958 hsa-miR-6780a-3p HITS-CLIP 23313552
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0005634 Component Nucleus IBA 21873635
GO:0006325 Process Chromatin organization IEA
GO:0046872 Function Metal ion binding IEA
GO:0051213 Function Dioxygenase activity IEA
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
615858 25642 ENSG00000081019
Protein
UniProt ID Q5VWQ0
Protein name Lysine-specific demethylase 9 (KDM9) (EC 1.14.11.-) (Round spermatid basic protein 1)
Protein function Histone demethylase that specifically demethylates dimethylated 'Lys-20' of histone H4 (H4K20me2), thereby modulating chromosome architecture.
Family and domains
Sequence
MFISGRRTADKWRAEERLQCPAGSARAALARCADGGAVGPFKCVFVGEMAAQVGAVRVVR
AVAAQEEPDKEGKEKPHAGVSPRGVKRQRRSSSGGSQEKRGRPSQEPPLAPPHRRRRSRQ
HPGPLPPTNAAPTVPGPVEPLLLPPPPPPSLAPAGPAVAAPLPAPSTSALFTFSPLTVSA
AGPKHKGHKERHKHHHHRGPDGDPSSCGTDLKHKDKQENGERTGGVPLIKAPKRETPDEN
GKTQRADDFVLKKIKKKKKKKHREDMRGRRLKMYNKEVQTVCAGLTRISKEILTQGQINS
TSGLNKESFRYLKDEQLCRLNLGMQEYRVPQGVQTPFMTHQEHSIRRNFLKTGTKFSNFI
HEEHQSNGGALVLHAYMDELSFLSPMEMERFSEEFLALTFSENEKNAAYYALAIVHGAAA
YLPDFLDYFAFNFPNTPVKMEILGKKDIETTTISNFHTQVNRTYCCGTYRAGPMRQISLV
GAVDEEVGDYFPEFLDMLEESPFLKMTLPWGTLSSLRLQCRSQSDDGPIMWVRPGEQMIP
TADMPKSPFKRRRSMNEIKNLQYLPRTSEPREVLFEDRTRAHADHVGQGFDWQSTAAVGV
LKAVQFGEWSDQPRITKDVICFHAEDFTDVVQRLQLDLHEPPVSQCVQWVDEAKLNQMRR
EGIRYARIQLCDNDIYFIPRNVIHQFKTVSAVCSLAWHIRLKQYHPVVEATQNTESNSNM
DCGLTGKRELEVDSQCVRIKTESEEACTEIQLLTTASSSFPPASELNLQQDQKTQPIPVL
KVESRLDSDQQHNLQEHSTTSV
Sequence length 802
Interactions View interactions
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Rheumatoid arthritis Rheumatoid Arthritis rs587776843 19503088
Unknown
Disease term Disease name Evidence References Source
Hypothyroidism Hypothyroidism GWAS
Crohn Disease Crohn Disease GWAS
Giant Cell Arteritis Giant Cell Arteritis GWAS
Coronary artery disease Coronary artery disease GWAS
Associations from Text Mining
Disease Name Relationship Type References
Arthritis Rheumatoid Associate 20975833, 33740106
Hypoxia Associate 28619028
Inflammatory Breast Neoplasms Associate 31532791
Meningioma Associate 37515398
Muscular Dystrophy Duchenne Associate 33740106
Tuberculosis Meningeal Associate 33740106
Uterine Cervical Neoplasms Associate 34526665