Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene SNPs miRNA Gene ontology Other IDs Protein Associated diseases
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	5375
Gene name Gene Name - the full gene name approved by the HGNC.	Peripheral myelin protein 2
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	PMP2
Synonyms (NCBI Gene) Gene synonyms aliases	CMT1G, FABP8, M-FABP, MP2, P2
Chromosome Chromosome number	8
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	8q21.13
Summary Summary of gene provided in NCBI Entrez Gene.	The protein encoded by this gene localizes to myelin sheaths of the peripheral nervous system. The encoded protein can bind both the membrane layers of the sheaths and monomeric lipids, and is thought to provide stability to the sheath. A defect in this g

Show/Hide all(3)

SNP ID	Visualize variation	Clinical significance	Consequence
rs879253869	A>T	Pathogenic, likely-pathogenic	Intron variant, coding sequence variant, missense variant
rs1563518388	A>G	Likely-pathogenic	Coding sequence variant, intron variant, missense variant
rs1563518390	T>G	Pathogenic	Coding sequence variant, intron variant, missense variant

Show/Hide all(78)

miRTarBase ID	miRNA	Experiments	Reference
MIRT025888	hsa-miR-7-5p	Microarray	17612493
MIRT1244566	hsa-miR-103b	CLIP-seq
MIRT1244567	hsa-miR-15a	CLIP-seq
MIRT1244568	hsa-miR-15b	CLIP-seq
MIRT1244569	hsa-miR-16	CLIP-seq
MIRT1244570	hsa-miR-195	CLIP-seq
MIRT1244571	hsa-miR-208a	CLIP-seq
MIRT1244572	hsa-miR-208b	CLIP-seq
MIRT1244573	hsa-miR-3074-5p	CLIP-seq
MIRT1244574	hsa-miR-3176	CLIP-seq
MIRT1244575	hsa-miR-3185	CLIP-seq
MIRT1244576	hsa-miR-3200-5p	CLIP-seq
MIRT1244577	hsa-miR-3202	CLIP-seq
MIRT1244578	hsa-miR-339-5p	CLIP-seq
MIRT1244579	hsa-miR-3617	CLIP-seq
MIRT1244580	hsa-miR-3662	CLIP-seq
MIRT1244581	hsa-miR-3674	CLIP-seq
MIRT1244582	hsa-miR-376a	CLIP-seq
MIRT1244583	hsa-miR-376b	CLIP-seq
MIRT1244584	hsa-miR-3922-3p	CLIP-seq
MIRT1244585	hsa-miR-409-3p	CLIP-seq
MIRT1244586	hsa-miR-424	CLIP-seq
MIRT1244587	hsa-miR-4281	CLIP-seq
MIRT1244588	hsa-miR-4310	CLIP-seq
MIRT1244589	hsa-miR-4318	CLIP-seq
MIRT1244590	hsa-miR-4475	CLIP-seq
MIRT1244591	hsa-miR-4477a	CLIP-seq
MIRT1244592	hsa-miR-4524	CLIP-seq
MIRT1244593	hsa-miR-4679	CLIP-seq
MIRT1244594	hsa-miR-4693-5p	CLIP-seq
MIRT1244595	hsa-miR-4699-3p	CLIP-seq
MIRT1244596	hsa-miR-4703-3p	CLIP-seq
MIRT1244597	hsa-miR-4704-3p	CLIP-seq
MIRT1244598	hsa-miR-4709-3p	CLIP-seq
MIRT1244599	hsa-miR-4722-3p	CLIP-seq
MIRT1244600	hsa-miR-4747-5p	CLIP-seq
MIRT1244601	hsa-miR-4775	CLIP-seq
MIRT1244602	hsa-miR-4781-3p	CLIP-seq
MIRT1244603	hsa-miR-489	CLIP-seq
MIRT1244604	hsa-miR-497	CLIP-seq
MIRT1244605	hsa-miR-499-5p	CLIP-seq
MIRT1244606	hsa-miR-503	CLIP-seq
MIRT1244607	hsa-miR-509-3p	CLIP-seq
MIRT1244608	hsa-miR-563	CLIP-seq
MIRT1244609	hsa-miR-590-3p	CLIP-seq
MIRT1244610	hsa-miR-641	CLIP-seq
MIRT1244611	hsa-miR-646	CLIP-seq
MIRT1244612	hsa-miR-656	CLIP-seq
MIRT1244613	hsa-miR-664	CLIP-seq
MIRT1244614	hsa-miR-885-5p	CLIP-seq
MIRT1244615	hsa-miR-892a	CLIP-seq
MIRT2072331	hsa-miR-3171	CLIP-seq
MIRT2072332	hsa-miR-3691-5p	CLIP-seq
MIRT2072333	hsa-miR-4307	CLIP-seq
MIRT2072334	hsa-miR-4491	CLIP-seq
MIRT2072335	hsa-miR-4657	CLIP-seq
MIRT2072336	hsa-miR-4752	CLIP-seq
MIRT2072337	hsa-miR-4764-5p	CLIP-seq
MIRT2072331	hsa-miR-3171	CLIP-seq
MIRT2299509	hsa-miR-3606	CLIP-seq
MIRT1244581	hsa-miR-3674	CLIP-seq
MIRT2072332	hsa-miR-3691-5p	CLIP-seq
MIRT2299510	hsa-miR-3692	CLIP-seq
MIRT2299511	hsa-miR-377	CLIP-seq
MIRT1244587	hsa-miR-4281	CLIP-seq
MIRT2072334	hsa-miR-4491	CLIP-seq
MIRT1244592	hsa-miR-4524	CLIP-seq
MIRT2072335	hsa-miR-4657	CLIP-seq
MIRT2072336	hsa-miR-4752	CLIP-seq
MIRT2072337	hsa-miR-4764-5p	CLIP-seq
MIRT2299512	hsa-miR-4789-3p	CLIP-seq
MIRT2299513	hsa-miR-568	CLIP-seq
MIRT2299514	hsa-miR-579	CLIP-seq
MIRT2299515	hsa-miR-587	CLIP-seq
MIRT1244611	hsa-miR-646	CLIP-seq
MIRT2072333	hsa-miR-4307	CLIP-seq
MIRT2596186	hsa-miR-3913-3p	CLIP-seq
MIRT1244603	hsa-miR-489	CLIP-seq

Show/Hide all(13)

GO ID	Ontology	Definition	Evidence	Reference
GO:0005504	Function	Fatty acid binding	IBA
GO:0005504	Function	Fatty acid binding	IDA	20421974
GO:0005515	Function	Protein binding	IPI	25416956, 31515488
GO:0005634	Component	Nucleus	IBA
GO:0005737	Component	Cytoplasm	IEA
GO:0005829	Component	Cytosol	IBA
GO:0008289	Function	Lipid binding	IEA
GO:0015485	Function	Cholesterol binding	IDA	20421974
GO:0015908	Process	Fatty acid transport	IBA
GO:0043209	Component	Myelin sheath	IEA
GO:0061024	Process	Membrane organization	IEA
GO:0061024	Process	Membrane organization	IEA
GO:0070062	Component	Extracellular exosome	HDA	23533145

MIM	HGNC	e!Ensembl
170715	9117	ENSG00000147588

Protein

UniProt ID

P02689

Protein name

Myelin P2 protein (Peripheral myelin protein 2)

Protein function

May play a role in lipid transport protein in Schwann cells. May bind cholesterol.

PDB

2WUT , 3NR3 , 4A1H , 4A1Y , 4A8Z , 4BVM , 4D6A , 4D6B , 5N4M , 5N4P , 5N4Q , 6EW2 , 6EW4 , 6EW5 , 6S2M , 6S2S , 6STS , 6XU5 , 6XU9 , 6XUA , 6XUW , 6XVQ , 6XVR , 6XVS , 6XVY , 6XW9 , 7NRW , 7NSR , 7NTP , 7O60

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF00061	Lipocalin	6 → 132	Lipocalin / cytosolic fatty-acid binding protein family	Domain

Sequence

MSNKFLGTWKLVSSENFDDYMKALGVGLATRKLGNLAKPTVIISKKGDIITIRTESTFKN
TEISFKLGQEFEETTADNRKTKSIVTLQRGSLNQVQRWDGKETTIKRKLVNGKMVAECKM
KGVVCTRIYEKV

Sequence length

132

Interactions

View interactions

Show/Hide Causal Diseases (2)

Disease merge term	Disease name	dbSNP ID	References
Causal Diseases caused by PATHOGENIC or LIKELY PATHOGENIC variants from ClinVar only
Charcot-Marie-Tooth disease	charcot-marie-tooth disease, demyelinating, type 1g	rs1563518390, rs879253869, rs1563518388	N/A
Peripheral Neuropathy	peripheral neuropathy	rs879253869	N/A

Show/Hide Unknown Diseases (1)

Disease merge term	Disease name	Evidence	References	Source
Unknown Includes: (1) ClinVar NON-pathogenic variants (Uncertain, Benign, Conflicting, VUS), (2) GenCC associations, (3) GWAS associations, (4) CBGDA evidence-based associations. NOTE: Diseases with pathogenic evidence are excluded to avoid conflicts.
Diabetes	Type 2 diabetes	N/A	N/A	GWAS

Show/Hide Text Mining Associations (7)

Disease Name	Relationship Type	References
Associations from Text Mining Disease associations identified through Pubtator
Alzheimer Disease	Associate	37149819
Charcot Marie Tooth Disease	Associate	27009151, 29336362, 30249361, 31412900, 34138518
Demyelinating Diseases	Associate	27009151
Gingival Diseases	Associate	31743516
Nervous System Diseases	Associate	30249361, 34138518
Peripheral Nervous System Diseases	Associate	31412900
Polyneuropathies	Associate	31412900

PMP2 (peripheral myelin protein 2)