MBD3 (methyl-CpG binding domain protein 3)

Gene

• Entrez ID: 53615
• Gene name: Methyl-CpG binding domain protein 3
• Gene symbol: MBD3
• Synonyms (NCBI Gene): -
• Chromosome: 19
• Chromosome location: 19p13.3
• Summary: DNA methylation is the major modification of eukaryotic genomes and plays an essential role in mammalian development. This gene belongs to a family of nuclear proteins which are characterized by the presence of a methyl-CpG binding domain (MBD). The encod

miRNA

miRTarBase ID	miRNA	Experiments	Reference
MIRT022788	hsa-miR-124-3p	Proteomics;Microarray	18668037
MIRT037081	hsa-miR-877-3p	CLASH	23622248
MIRT625053	hsa-miR-508-5p	HITS-CLIP	23824327
MIRT625052	hsa-miR-1288-5p	HITS-CLIP	23824327
MIRT625051	hsa-miR-1273g-3p	HITS-CLIP	23824327
MIRT625050	hsa-miR-6849-3p	HITS-CLIP	23824327
MIRT625049	hsa-miR-1914-5p	HITS-CLIP	23824327
MIRT625048	hsa-miR-766-3p	HITS-CLIP	23824327
MIRT625047	hsa-miR-4793-3p	HITS-CLIP	23824327
MIRT625046	hsa-miR-4252	HITS-CLIP	23824327
MIRT625045	hsa-miR-6811-3p	HITS-CLIP	23824327
MIRT625044	hsa-miR-19a-3p	HITS-CLIP	23824327
MIRT625043	hsa-miR-19b-3p	HITS-CLIP	23824327
MIRT625042	hsa-miR-6512-3p	HITS-CLIP	23824327
MIRT625041	hsa-miR-6720-5p	HITS-CLIP	23824327
MIRT625040	hsa-miR-7703	HITS-CLIP	23824327
MIRT625053	hsa-miR-508-5p	HITS-CLIP	23824327
MIRT625051	hsa-miR-1273g-3p	HITS-CLIP	23824327
MIRT625050	hsa-miR-6849-3p	HITS-CLIP	23824327
MIRT625049	hsa-miR-1914-5p	HITS-CLIP	23824327
MIRT625048	hsa-miR-766-3p	HITS-CLIP	23824327
MIRT625047	hsa-miR-4793-3p	HITS-CLIP	23824327
MIRT625046	hsa-miR-4252	HITS-CLIP	23824327
MIRT625045	hsa-miR-6811-3p	HITS-CLIP	23824327
MIRT625044	hsa-miR-19a-3p	HITS-CLIP	23824327
MIRT625043	hsa-miR-19b-3p	HITS-CLIP	23824327
MIRT625042	hsa-miR-6512-3p	HITS-CLIP	23824327
MIRT625041	hsa-miR-6720-5p	HITS-CLIP	23824327
MIRT625040	hsa-miR-7703	HITS-CLIP	23824327
MIRT625053	hsa-miR-508-5p	HITS-CLIP	23824327
MIRT625052	hsa-miR-1288-5p	HITS-CLIP	23824327
MIRT625051	hsa-miR-1273g-3p	HITS-CLIP	23824327
MIRT625050	hsa-miR-6849-3p	HITS-CLIP	23824327
MIRT625049	hsa-miR-1914-5p	HITS-CLIP	23824327
MIRT625048	hsa-miR-766-3p	HITS-CLIP	23824327
MIRT625047	hsa-miR-4793-3p	HITS-CLIP	23824327
MIRT625046	hsa-miR-4252	HITS-CLIP	23824327
MIRT625045	hsa-miR-6811-3p	HITS-CLIP	23824327
MIRT625044	hsa-miR-19a-3p	HITS-CLIP	23824327
MIRT625043	hsa-miR-19b-3p	HITS-CLIP	23824327
MIRT625042	hsa-miR-6512-3p	HITS-CLIP	23824327
MIRT625041	hsa-miR-6720-5p	HITS-CLIP	23824327
MIRT625040	hsa-miR-7703	HITS-CLIP	23824327
MIRT625053	hsa-miR-508-5p	HITS-CLIP	23824327
MIRT625051	hsa-miR-1273g-3p	HITS-CLIP	23824327
MIRT625050	hsa-miR-6849-3p	HITS-CLIP	23824327
MIRT625049	hsa-miR-1914-5p	HITS-CLIP	23824327
MIRT625048	hsa-miR-766-3p	HITS-CLIP	23824327
MIRT625047	hsa-miR-4793-3p	HITS-CLIP	23824327
MIRT625046	hsa-miR-4252	HITS-CLIP	23824327
MIRT625045	hsa-miR-6811-3p	HITS-CLIP	23824327
MIRT625044	hsa-miR-19a-3p	HITS-CLIP	23824327
MIRT625043	hsa-miR-19b-3p	HITS-CLIP	23824327
MIRT625042	hsa-miR-6512-3p	HITS-CLIP	23824327
MIRT625041	hsa-miR-6720-5p	HITS-CLIP	23824327
MIRT625040	hsa-miR-7703	HITS-CLIP	23824327
MIRT625053	hsa-miR-508-5p	HITS-CLIP	23824327
MIRT625052	hsa-miR-1288-5p	HITS-CLIP	23824327
MIRT625051	hsa-miR-1273g-3p	HITS-CLIP	23824327
MIRT625050	hsa-miR-6849-3p	HITS-CLIP	23824327
MIRT625049	hsa-miR-1914-5p	HITS-CLIP	23824327
MIRT625048	hsa-miR-766-3p	HITS-CLIP	23824327
MIRT625047	hsa-miR-4793-3p	HITS-CLIP	23824327
MIRT625046	hsa-miR-4252	HITS-CLIP	23824327
MIRT625045	hsa-miR-6811-3p	HITS-CLIP	23824327
MIRT625044	hsa-miR-19a-3p	HITS-CLIP	23824327
MIRT625043	hsa-miR-19b-3p	HITS-CLIP	23824327
MIRT625042	hsa-miR-6512-3p	HITS-CLIP	23824327
MIRT625041	hsa-miR-6720-5p	HITS-CLIP	23824327
MIRT625040	hsa-miR-7703	HITS-CLIP	23824327
MIRT625052	hsa-miR-1288-5p	HITS-CLIP	23824327
MIRT625051	hsa-miR-1273g-3p	HITS-CLIP	23824327
MIRT625049	hsa-miR-1914-5p	HITS-CLIP	23824327
MIRT625048	hsa-miR-766-3p	HITS-CLIP	23824327
MIRT625047	hsa-miR-4793-3p	HITS-CLIP	23824327
MIRT625046	hsa-miR-4252	HITS-CLIP	23824327
MIRT625045	hsa-miR-6811-3p	HITS-CLIP	23824327
MIRT625044	hsa-miR-19a-3p	HITS-CLIP	23824327
MIRT625043	hsa-miR-19b-3p	HITS-CLIP	23824327
MIRT625053	hsa-miR-508-5p	HITS-CLIP	23824327
MIRT625052	hsa-miR-1288-5p	HITS-CLIP	23824327
MIRT625051	hsa-miR-1273g-3p	HITS-CLIP	23824327
MIRT625050	hsa-miR-6849-3p	HITS-CLIP	23824327
MIRT625049	hsa-miR-1914-5p	HITS-CLIP	23824327
MIRT625048	hsa-miR-766-3p	HITS-CLIP	23824327
MIRT625047	hsa-miR-4793-3p	HITS-CLIP	23824327
MIRT625046	hsa-miR-4252	HITS-CLIP	23824327
MIRT625045	hsa-miR-6811-3p	HITS-CLIP	23824327
MIRT625044	hsa-miR-19a-3p	HITS-CLIP	23824327
MIRT625043	hsa-miR-19b-3p	HITS-CLIP	23824327
MIRT625042	hsa-miR-6512-3p	HITS-CLIP	23824327
MIRT625041	hsa-miR-6720-5p	HITS-CLIP	23824327
MIRT625040	hsa-miR-7703	HITS-CLIP	23824327
MIRT625053	hsa-miR-508-5p	HITS-CLIP	23824327
MIRT625052	hsa-miR-1288-5p	HITS-CLIP	23824327
MIRT625051	hsa-miR-1273g-3p	HITS-CLIP	23824327
MIRT625050	hsa-miR-6849-3p	HITS-CLIP	23824327
MIRT625049	hsa-miR-1914-5p	HITS-CLIP	23824327
MIRT625048	hsa-miR-766-3p	HITS-CLIP	23824327
MIRT625047	hsa-miR-4793-3p	HITS-CLIP	23824327
MIRT625046	hsa-miR-4252	HITS-CLIP	23824327
MIRT625045	hsa-miR-6811-3p	HITS-CLIP	23824327
MIRT625044	hsa-miR-19a-3p	HITS-CLIP	23824327
MIRT625043	hsa-miR-19b-3p	HITS-CLIP	23824327
MIRT625042	hsa-miR-6512-3p	HITS-CLIP	23824327
MIRT625041	hsa-miR-6720-5p	HITS-CLIP	23824327
MIRT625040	hsa-miR-7703	HITS-CLIP	23824327
MIRT625053	hsa-miR-508-5p	HITS-CLIP	23824327
MIRT625051	hsa-miR-1273g-3p	HITS-CLIP	23824327
MIRT625050	hsa-miR-6849-3p	HITS-CLIP	23824327
MIRT625049	hsa-miR-1914-5p	HITS-CLIP	23824327
MIRT625048	hsa-miR-766-3p	HITS-CLIP	23824327
MIRT625047	hsa-miR-4793-3p	HITS-CLIP	23824327
MIRT625046	hsa-miR-4252	HITS-CLIP	23824327
MIRT625045	hsa-miR-6811-3p	HITS-CLIP	23824327
MIRT625044	hsa-miR-19a-3p	HITS-CLIP	23824327
MIRT625043	hsa-miR-19b-3p	HITS-CLIP	23824327
MIRT625042	hsa-miR-6512-3p	HITS-CLIP	23824327
MIRT625041	hsa-miR-6720-5p	HITS-CLIP	23824327
MIRT625040	hsa-miR-7703	HITS-CLIP	23824327
MIRT625053	hsa-miR-508-5p	HITS-CLIP	23824327
MIRT625052	hsa-miR-1288-5p	HITS-CLIP	23824327
MIRT625051	hsa-miR-1273g-3p	HITS-CLIP	23824327
MIRT625050	hsa-miR-6849-3p	HITS-CLIP	23824327
MIRT625049	hsa-miR-1914-5p	HITS-CLIP	23824327
MIRT625048	hsa-miR-766-3p	HITS-CLIP	23824327
MIRT625047	hsa-miR-4793-3p	HITS-CLIP	23824327
MIRT625046	hsa-miR-4252	HITS-CLIP	23824327
MIRT625045	hsa-miR-6811-3p	HITS-CLIP	23824327
MIRT625044	hsa-miR-19a-3p	HITS-CLIP	23824327
MIRT625043	hsa-miR-19b-3p	HITS-CLIP	23824327
MIRT625042	hsa-miR-6512-3p	HITS-CLIP	23824327
MIRT625041	hsa-miR-6720-5p	HITS-CLIP	23824327
MIRT625040	hsa-miR-7703	HITS-CLIP	23824327
MIRT625053	hsa-miR-508-5p	HITS-CLIP	23824327
MIRT625051	hsa-miR-1273g-3p	HITS-CLIP	23824327
MIRT625050	hsa-miR-6849-3p	HITS-CLIP	23824327
MIRT625049	hsa-miR-1914-5p	HITS-CLIP	23824327
MIRT625048	hsa-miR-766-3p	HITS-CLIP	23824327
MIRT625047	hsa-miR-4793-3p	HITS-CLIP	23824327
MIRT625046	hsa-miR-4252	HITS-CLIP	23824327
MIRT625045	hsa-miR-6811-3p	HITS-CLIP	23824327
MIRT625044	hsa-miR-19a-3p	HITS-CLIP	23824327
MIRT625043	hsa-miR-19b-3p	HITS-CLIP	23824327
MIRT625042	hsa-miR-6512-3p	HITS-CLIP	23824327
MIRT625041	hsa-miR-6720-5p	HITS-CLIP	23824327
MIRT625040	hsa-miR-7703	HITS-CLIP	23824327
MIRT625053	hsa-miR-508-5p	HITS-CLIP	23824327
MIRT625052	hsa-miR-1288-5p	HITS-CLIP	23824327
MIRT625051	hsa-miR-1273g-3p	HITS-CLIP	23824327
MIRT625050	hsa-miR-6849-3p	HITS-CLIP	23824327
MIRT625049	hsa-miR-1914-5p	HITS-CLIP	23824327
MIRT625048	hsa-miR-766-3p	HITS-CLIP	23824327
MIRT625047	hsa-miR-4793-3p	HITS-CLIP	23824327
MIRT625046	hsa-miR-4252	HITS-CLIP	23824327
MIRT625045	hsa-miR-6811-3p	HITS-CLIP	23824327
MIRT625044	hsa-miR-19a-3p	HITS-CLIP	23824327
MIRT625043	hsa-miR-19b-3p	HITS-CLIP	23824327
MIRT625042	hsa-miR-6512-3p	HITS-CLIP	23824327
MIRT625041	hsa-miR-6720-5p	HITS-CLIP	23824327
MIRT625040	hsa-miR-7703	HITS-CLIP	23824327
MIRT625052	hsa-miR-1288-5p	HITS-CLIP	23824327
MIRT625051	hsa-miR-1273g-3p	HITS-CLIP	23824327
MIRT625049	hsa-miR-1914-5p	HITS-CLIP	23824327
MIRT625048	hsa-miR-766-3p	HITS-CLIP	23824327
MIRT625047	hsa-miR-4793-3p	HITS-CLIP	23824327
MIRT625046	hsa-miR-4252	HITS-CLIP	23824327
MIRT625045	hsa-miR-6811-3p	HITS-CLIP	23824327
MIRT625044	hsa-miR-19a-3p	HITS-CLIP	23824327
MIRT625043	hsa-miR-19b-3p	HITS-CLIP	23824327
MIRT625053	hsa-miR-508-5p	HITS-CLIP	23824327
MIRT625052	hsa-miR-1288-5p	HITS-CLIP	23824327
MIRT625051	hsa-miR-1273g-3p	HITS-CLIP	23824327
MIRT625050	hsa-miR-6849-3p	HITS-CLIP	23824327
MIRT625049	hsa-miR-1914-5p	HITS-CLIP	23824327
MIRT625048	hsa-miR-766-3p	HITS-CLIP	23824327
MIRT625047	hsa-miR-4793-3p	HITS-CLIP	23824327
MIRT625046	hsa-miR-4252	HITS-CLIP	23824327
MIRT625045	hsa-miR-6811-3p	HITS-CLIP	23824327
MIRT625044	hsa-miR-19a-3p	HITS-CLIP	23824327
MIRT625043	hsa-miR-19b-3p	HITS-CLIP	23824327
MIRT625042	hsa-miR-6512-3p	HITS-CLIP	23824327
MIRT625041	hsa-miR-6720-5p	HITS-CLIP	23824327
MIRT625040	hsa-miR-7703	HITS-CLIP	23824327
MIRT1134928	hsa-miR-1179	CLIP-seq
MIRT1134929	hsa-miR-1182	CLIP-seq
MIRT1134930	hsa-miR-1193	CLIP-seq
MIRT1134931	hsa-miR-1207-5p	CLIP-seq
MIRT1134932	hsa-miR-124	CLIP-seq
MIRT1134933	hsa-miR-128	CLIP-seq
MIRT1134934	hsa-miR-1285	CLIP-seq
MIRT1134935	hsa-miR-1321	CLIP-seq
MIRT1134936	hsa-miR-151-5p	CLIP-seq
MIRT1134937	hsa-miR-151b	CLIP-seq
MIRT1134938	hsa-miR-1910	CLIP-seq
MIRT1134939	hsa-miR-1913	CLIP-seq
MIRT1134940	hsa-miR-193a-3p	CLIP-seq
MIRT1134941	hsa-miR-193a-5p	CLIP-seq
MIRT1134942	hsa-miR-193b	CLIP-seq
MIRT1134943	hsa-miR-214	CLIP-seq
MIRT1134944	hsa-miR-27a	CLIP-seq
MIRT1134945	hsa-miR-27b	CLIP-seq
MIRT1134946	hsa-miR-28-5p	CLIP-seq
MIRT1134947	hsa-miR-3125	CLIP-seq
MIRT1134948	hsa-miR-3128	CLIP-seq
MIRT1134949	hsa-miR-3135b	CLIP-seq
MIRT1134950	hsa-miR-3137	CLIP-seq
MIRT1134951	hsa-miR-3139	CLIP-seq
MIRT1134952	hsa-miR-3144-5p	CLIP-seq
MIRT1134953	hsa-miR-3152-3p	CLIP-seq
MIRT1134954	hsa-miR-3162-5p	CLIP-seq
MIRT1134955	hsa-miR-3176	CLIP-seq
MIRT1134956	hsa-miR-3187-5p	CLIP-seq
MIRT1134957	hsa-miR-3189-5p	CLIP-seq
MIRT1134958	hsa-miR-3191	CLIP-seq
MIRT1134959	hsa-miR-3195	CLIP-seq
MIRT1134960	hsa-miR-3199	CLIP-seq
MIRT1134961	hsa-miR-324-3p	CLIP-seq
MIRT1134962	hsa-miR-34a	CLIP-seq
MIRT1134963	hsa-miR-34c-5p	CLIP-seq
MIRT1134964	hsa-miR-3616-3p	CLIP-seq
MIRT1134965	hsa-miR-3619-5p	CLIP-seq
MIRT1134966	hsa-miR-3652	CLIP-seq
MIRT1134967	hsa-miR-3663-3p	CLIP-seq
MIRT1134968	hsa-miR-3664-5p	CLIP-seq
MIRT1134969	hsa-miR-3691-3p	CLIP-seq
MIRT1134970	hsa-miR-3916	CLIP-seq
MIRT1134971	hsa-miR-3918	CLIP-seq
MIRT1134972	hsa-miR-3922-3p	CLIP-seq
MIRT1134973	hsa-miR-4270	CLIP-seq
MIRT1134974	hsa-miR-4323	CLIP-seq
MIRT1134975	hsa-miR-4419a	CLIP-seq
MIRT1134976	hsa-miR-4430	CLIP-seq
MIRT1134977	hsa-miR-4431	CLIP-seq
MIRT1134978	hsa-miR-4441	CLIP-seq
MIRT1134979	hsa-miR-4447	CLIP-seq
MIRT1134980	hsa-miR-4459	CLIP-seq
MIRT1134981	hsa-miR-4472	CLIP-seq
MIRT1134982	hsa-miR-4487	CLIP-seq
MIRT1134983	hsa-miR-4488	CLIP-seq
MIRT1134984	hsa-miR-449a	CLIP-seq
MIRT1134985	hsa-miR-449b	CLIP-seq
MIRT1134986	hsa-miR-4508	CLIP-seq
MIRT1134987	hsa-miR-4510	CLIP-seq
MIRT1134988	hsa-miR-4514	CLIP-seq
MIRT1134989	hsa-miR-4515	CLIP-seq
MIRT1134990	hsa-miR-4522	CLIP-seq
MIRT1134991	hsa-miR-455-3p	CLIP-seq
MIRT1134992	hsa-miR-4640-5p	CLIP-seq
MIRT1134993	hsa-miR-4641	CLIP-seq
MIRT1134994	hsa-miR-4645-5p	CLIP-seq
MIRT1134995	hsa-miR-4652-5p	CLIP-seq
MIRT1134996	hsa-miR-4653-3p	CLIP-seq
MIRT1134997	hsa-miR-4673	CLIP-seq
MIRT1134998	hsa-miR-4691-3p	CLIP-seq
MIRT1134999	hsa-miR-4692	CLIP-seq
MIRT1135000	hsa-miR-4697-5p	CLIP-seq
MIRT1135001	hsa-miR-4699-3p	CLIP-seq
MIRT1135002	hsa-miR-4720-5p	CLIP-seq
MIRT1135003	hsa-miR-4726-5p	CLIP-seq
MIRT1135004	hsa-miR-4732-5p	CLIP-seq
MIRT1135005	hsa-miR-4733-3p	CLIP-seq
MIRT1135006	hsa-miR-4739	CLIP-seq
MIRT1135007	hsa-miR-4747-5p	CLIP-seq
MIRT1135008	hsa-miR-4755-3p	CLIP-seq
MIRT1135009	hsa-miR-4756-5p	CLIP-seq
MIRT1135010	hsa-miR-4757-3p	CLIP-seq
MIRT1135011	hsa-miR-4757-5p	CLIP-seq
MIRT1135012	hsa-miR-4763-3p	CLIP-seq
MIRT1135013	hsa-miR-4779	CLIP-seq
MIRT1135014	hsa-miR-4795-5p	CLIP-seq
MIRT1135015	hsa-miR-4799-3p	CLIP-seq
MIRT1135016	hsa-miR-486-3p	CLIP-seq
MIRT1135017	hsa-miR-491-5p	CLIP-seq
MIRT1135018	hsa-miR-506	CLIP-seq
MIRT1135019	hsa-miR-612	CLIP-seq
MIRT1135020	hsa-miR-637	CLIP-seq
MIRT1135021	hsa-miR-665	CLIP-seq
MIRT1135022	hsa-miR-708	CLIP-seq
MIRT1135023	hsa-miR-761	CLIP-seq
MIRT1135024	hsa-miR-877	CLIP-seq
MIRT1135025	hsa-miR-885-3p	CLIP-seq
MIRT1135026	hsa-miR-892a	CLIP-seq
MIRT1135027	hsa-miR-940	CLIP-seq
MIRT1135028	hsa-miR-941	CLIP-seq
MIRT1134964	hsa-miR-3616-3p	CLIP-seq
MIRT1134928	hsa-miR-1179	CLIP-seq
MIRT2038344	hsa-miR-1185	CLIP-seq
MIRT1134930	hsa-miR-1193	CLIP-seq
MIRT2038345	hsa-miR-1200	CLIP-seq
MIRT1134931	hsa-miR-1207-5p	CLIP-seq
MIRT2038346	hsa-miR-1225-3p	CLIP-seq
MIRT2038347	hsa-miR-1233	CLIP-seq
MIRT2038348	hsa-miR-1247	CLIP-seq
MIRT1134933	hsa-miR-128	CLIP-seq
MIRT2038349	hsa-miR-1291	CLIP-seq
MIRT2038350	hsa-miR-146b-3p	CLIP-seq
MIRT2038351	hsa-miR-1827	CLIP-seq
MIRT2038352	hsa-miR-2113	CLIP-seq
MIRT1134943	hsa-miR-214	CLIP-seq
MIRT2038353	hsa-miR-218	CLIP-seq
MIRT1134944	hsa-miR-27a	CLIP-seq
MIRT1134945	hsa-miR-27b	CLIP-seq
MIRT1134946	hsa-miR-28-5p	CLIP-seq
MIRT2038354	hsa-miR-2861	CLIP-seq
MIRT2038355	hsa-miR-3064-5p	CLIP-seq
MIRT2038356	hsa-miR-3065-3p	CLIP-seq
MIRT1134948	hsa-miR-3128	CLIP-seq
MIRT1134951	hsa-miR-3139	CLIP-seq
MIRT1134953	hsa-miR-3152-3p	CLIP-seq
MIRT2038357	hsa-miR-3173-5p	CLIP-seq
MIRT2038358	hsa-miR-3183	CLIP-seq
MIRT1134959	hsa-miR-3195	CLIP-seq
MIRT2038359	hsa-miR-320a	CLIP-seq
MIRT2038360	hsa-miR-320b	CLIP-seq
MIRT2038361	hsa-miR-320c	CLIP-seq
MIRT2038362	hsa-miR-320d	CLIP-seq
MIRT2038363	hsa-miR-320e	CLIP-seq
MIRT2038364	hsa-miR-328	CLIP-seq
MIRT2038365	hsa-miR-3605-5p	CLIP-seq
MIRT1134965	hsa-miR-3619-5p	CLIP-seq
MIRT1134966	hsa-miR-3652	CLIP-seq
MIRT2038366	hsa-miR-3679-5p	CLIP-seq
MIRT2038367	hsa-miR-3974	CLIP-seq
MIRT2038368	hsa-miR-4324	CLIP-seq
MIRT2038369	hsa-miR-4429	CLIP-seq
MIRT1134976	hsa-miR-4430	CLIP-seq
MIRT1134977	hsa-miR-4431	CLIP-seq
MIRT2038370	hsa-miR-4436b-3p	CLIP-seq
MIRT1134982	hsa-miR-4487	CLIP-seq
MIRT2038371	hsa-miR-4505	CLIP-seq
MIRT1134988	hsa-miR-4514	CLIP-seq
MIRT1134990	hsa-miR-4522	CLIP-seq
MIRT1134991	hsa-miR-455-3p	CLIP-seq
MIRT2038372	hsa-miR-4638-5p	CLIP-seq
MIRT2038373	hsa-miR-4655-3p	CLIP-seq
MIRT2038374	hsa-miR-4670-5p	CLIP-seq
MIRT1134998	hsa-miR-4691-3p	CLIP-seq
MIRT1134999	hsa-miR-4692	CLIP-seq
MIRT2038375	hsa-miR-4693-3p	CLIP-seq
MIRT2038376	hsa-miR-4714-5p	CLIP-seq
MIRT1135002	hsa-miR-4720-5p	CLIP-seq
MIRT2038377	hsa-miR-4723-3p	CLIP-seq
MIRT2038378	hsa-miR-4731-5p	CLIP-seq
MIRT1135007	hsa-miR-4747-5p	CLIP-seq
MIRT1135010	hsa-miR-4757-3p	CLIP-seq
MIRT1135012	hsa-miR-4763-3p	CLIP-seq
MIRT2038379	hsa-miR-4780	CLIP-seq
MIRT1135015	hsa-miR-4799-3p	CLIP-seq
MIRT1135016	hsa-miR-486-3p	CLIP-seq
MIRT2038380	hsa-miR-544b	CLIP-seq
MIRT2038381	hsa-miR-550a	CLIP-seq
MIRT2038382	hsa-miR-636	CLIP-seq
MIRT2038383	hsa-miR-642a	CLIP-seq
MIRT1135022	hsa-miR-708	CLIP-seq
MIRT1135023	hsa-miR-761	CLIP-seq
MIRT2038384	hsa-miR-874	CLIP-seq
MIRT1135025	hsa-miR-885-3p	CLIP-seq
MIRT1135026	hsa-miR-892a	CLIP-seq
MIRT1135027	hsa-miR-940	CLIP-seq
MIRT2038344	hsa-miR-1185	CLIP-seq
MIRT2038348	hsa-miR-1247	CLIP-seq
MIRT2268242	hsa-miR-1271	CLIP-seq
MIRT1134933	hsa-miR-128	CLIP-seq
MIRT2268243	hsa-miR-1302	CLIP-seq
MIRT2268244	hsa-miR-1306	CLIP-seq
MIRT1134938	hsa-miR-1910	CLIP-seq
MIRT1134939	hsa-miR-1913	CLIP-seq
MIRT2268245	hsa-miR-2277-3p	CLIP-seq
MIRT1134944	hsa-miR-27a	CLIP-seq
MIRT1134945	hsa-miR-27b	CLIP-seq
MIRT1134946	hsa-miR-28-5p	CLIP-seq
MIRT1134951	hsa-miR-3139	CLIP-seq
MIRT1134961	hsa-miR-324-3p	CLIP-seq
MIRT2268246	hsa-miR-331-3p	CLIP-seq
MIRT2038365	hsa-miR-3605-5p	CLIP-seq
MIRT1134966	hsa-miR-3652	CLIP-seq
MIRT2038366	hsa-miR-3679-5p	CLIP-seq
MIRT2268247	hsa-miR-3942-3p	CLIP-seq
MIRT1134973	hsa-miR-4270	CLIP-seq
MIRT2268248	hsa-miR-4292	CLIP-seq
MIRT2268249	hsa-miR-4298	CLIP-seq
MIRT1134976	hsa-miR-4430	CLIP-seq
MIRT1134977	hsa-miR-4431	CLIP-seq
MIRT1134978	hsa-miR-4441	CLIP-seq
MIRT1134982	hsa-miR-4487	CLIP-seq
MIRT1134990	hsa-miR-4522	CLIP-seq
MIRT1134991	hsa-miR-455-3p	CLIP-seq
MIRT1134993	hsa-miR-4641	CLIP-seq
MIRT1135007	hsa-miR-4747-5p	CLIP-seq
MIRT1135010	hsa-miR-4757-3p	CLIP-seq
MIRT1135016	hsa-miR-486-3p	CLIP-seq
MIRT2268250	hsa-miR-513c	CLIP-seq
MIRT2268251	hsa-miR-514b-5p	CLIP-seq
MIRT1135022	hsa-miR-708	CLIP-seq
MIRT1135025	hsa-miR-885-3p	CLIP-seq
MIRT2268252	hsa-miR-96	CLIP-seq
MIRT2268242	hsa-miR-1271	CLIP-seq
MIRT1134933	hsa-miR-128	CLIP-seq
MIRT2268244	hsa-miR-1306	CLIP-seq
MIRT2038355	hsa-miR-3064-5p	CLIP-seq
MIRT2390663	hsa-miR-3925-3p	CLIP-seq
MIRT2268247	hsa-miR-3942-3p	CLIP-seq
MIRT1134996	hsa-miR-4653-3p	CLIP-seq
MIRT1135007	hsa-miR-4747-5p	CLIP-seq
MIRT1135010	hsa-miR-4757-3p	CLIP-seq
MIRT2390664	hsa-miR-604	CLIP-seq
MIRT2390665	hsa-miR-647	CLIP-seq
MIRT2390666	hsa-miR-659	CLIP-seq
MIRT2390667	hsa-miR-766	CLIP-seq
MIRT2268252	hsa-miR-96	CLIP-seq
MIRT2453797	hsa-miR-10a	CLIP-seq
MIRT2453798	hsa-miR-10b	CLIP-seq
MIRT2453799	hsa-miR-3620	CLIP-seq
MIRT2453797	hsa-miR-10a	CLIP-seq
MIRT2453798	hsa-miR-10b	CLIP-seq
MIRT2453799	hsa-miR-3620	CLIP-seq
MIRT2453797	hsa-miR-10a	CLIP-seq
MIRT2453798	hsa-miR-10b	CLIP-seq
MIRT2567896	hsa-miR-1202	CLIP-seq
MIRT1134934	hsa-miR-1285	CLIP-seq
MIRT2567897	hsa-miR-1324	CLIP-seq
MIRT2567898	hsa-miR-1470	CLIP-seq
MIRT2567899	hsa-miR-1471	CLIP-seq
MIRT2567900	hsa-miR-15a	CLIP-seq
MIRT2567901	hsa-miR-15b	CLIP-seq
MIRT2567902	hsa-miR-16	CLIP-seq
MIRT2567903	hsa-miR-195	CLIP-seq
MIRT1134943	hsa-miR-214	CLIP-seq
MIRT2567904	hsa-miR-22	CLIP-seq
MIRT2567905	hsa-miR-3166	CLIP-seq
MIRT1134956	hsa-miR-3187-5p	CLIP-seq
MIRT2567906	hsa-miR-3189-3p	CLIP-seq
MIRT2567907	hsa-miR-3194-5p	CLIP-seq
MIRT1134964	hsa-miR-3616-3p	CLIP-seq
MIRT1134965	hsa-miR-3619-5p	CLIP-seq
MIRT2453799	hsa-miR-3620	CLIP-seq
MIRT2567908	hsa-miR-3621	CLIP-seq
MIRT2567909	hsa-miR-3656	CLIP-seq
MIRT1134971	hsa-miR-3918	CLIP-seq
MIRT2567910	hsa-miR-3972	CLIP-seq
MIRT2567911	hsa-miR-424	CLIP-seq
MIRT1134973	hsa-miR-4270	CLIP-seq
MIRT2567912	hsa-miR-432	CLIP-seq
MIRT2038370	hsa-miR-4436b-3p	CLIP-seq
MIRT1134978	hsa-miR-4441	CLIP-seq
MIRT2567913	hsa-miR-4443	CLIP-seq
MIRT2567914	hsa-miR-4469	CLIP-seq
MIRT1134988	hsa-miR-4514	CLIP-seq
MIRT1134992	hsa-miR-4640-5p	CLIP-seq
MIRT1134994	hsa-miR-4645-5p	CLIP-seq
MIRT2567915	hsa-miR-4667-3p	CLIP-seq
MIRT1134997	hsa-miR-4673	CLIP-seq
MIRT2567916	hsa-miR-4687-5p	CLIP-seq
MIRT2567917	hsa-miR-4690-3p	CLIP-seq
MIRT1134999	hsa-miR-4692	CLIP-seq
MIRT1135003	hsa-miR-4726-5p	CLIP-seq
MIRT1135005	hsa-miR-4733-3p	CLIP-seq
MIRT2567918	hsa-miR-497	CLIP-seq
MIRT2567919	hsa-miR-516a-3p	CLIP-seq
MIRT1135019	hsa-miR-612	CLIP-seq
MIRT1135023	hsa-miR-761	CLIP-seq
MIRT2453797	hsa-miR-10a	CLIP-seq
MIRT2453798	hsa-miR-10b	CLIP-seq
MIRT2567896	hsa-miR-1202	CLIP-seq
MIRT2684701	hsa-miR-1224-3p	CLIP-seq
MIRT2567897	hsa-miR-1324	CLIP-seq
MIRT2567898	hsa-miR-1470	CLIP-seq
MIRT2567900	hsa-miR-15a	CLIP-seq
MIRT2567901	hsa-miR-15b	CLIP-seq
MIRT2567902	hsa-miR-16	CLIP-seq
MIRT2567903	hsa-miR-195	CLIP-seq
MIRT1134943	hsa-miR-214	CLIP-seq
MIRT2567904	hsa-miR-22	CLIP-seq
MIRT2567905	hsa-miR-3166	CLIP-seq
MIRT2567906	hsa-miR-3189-3p	CLIP-seq
MIRT2567907	hsa-miR-3194-5p	CLIP-seq
MIRT1134965	hsa-miR-3619-5p	CLIP-seq
MIRT2453799	hsa-miR-3620	CLIP-seq
MIRT2567908	hsa-miR-3621	CLIP-seq
MIRT2567909	hsa-miR-3656	CLIP-seq
MIRT2567910	hsa-miR-3972	CLIP-seq
MIRT2567911	hsa-miR-424	CLIP-seq
MIRT2684702	hsa-miR-4254	CLIP-seq
MIRT1134973	hsa-miR-4270	CLIP-seq
MIRT2684703	hsa-miR-4286	CLIP-seq
MIRT2567912	hsa-miR-432	CLIP-seq
MIRT1134978	hsa-miR-4441	CLIP-seq
MIRT2567913	hsa-miR-4443	CLIP-seq
MIRT2567914	hsa-miR-4469	CLIP-seq
MIRT1134988	hsa-miR-4514	CLIP-seq
MIRT2684704	hsa-miR-4633-3p	CLIP-seq
MIRT2038372	hsa-miR-4638-5p	CLIP-seq
MIRT1134994	hsa-miR-4645-5p	CLIP-seq
MIRT2038373	hsa-miR-4655-3p	CLIP-seq
MIRT2567915	hsa-miR-4667-3p	CLIP-seq
MIRT1134997	hsa-miR-4673	CLIP-seq
MIRT2567917	hsa-miR-4690-3p	CLIP-seq
MIRT1134999	hsa-miR-4692	CLIP-seq
MIRT1135005	hsa-miR-4733-3p	CLIP-seq
MIRT2567918	hsa-miR-497	CLIP-seq
MIRT2684705	hsa-miR-619	CLIP-seq
MIRT2038383	hsa-miR-642a	CLIP-seq
MIRT1135023	hsa-miR-761	CLIP-seq

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000122	Process	Negative regulation of transcription by RNA polymerase II	IBA
GO:0000785	Component	Chromatin	HDA	16217013
GO:0000785	Component	Chromatin	IEA
GO:0000792	Component	Heterochromatin	IEA
GO:0001701	Process	In utero embryonic development	IEA
GO:0003229	Process	Ventricular cardiac muscle tissue development	IEA
GO:0003677	Function	DNA binding	IEA
GO:0003677	Function	DNA binding	TAS	9774669
GO:0005515	Function	Protein binding	IPI	12183469, 19703393, 20676135, 21258344, 23455924, 23752268, 24048479, 25123934, 25416956, 26496610, 32296183, 33961781, 35271311
GO:0005634	Component	Nucleus	IBA
GO:0005634	Component	Nucleus	IDA	15701600, 20523938, 28977666, 33283408
GO:0005634	Component	Nucleus	IEA
GO:0005654	Component	Nucleoplasm	IDA
GO:0005654	Component	Nucleoplasm	TAS
GO:0005694	Component	Chromosome	IEA
GO:0005737	Component	Cytoplasm	IEA
GO:0006338	Process	Chromatin remodeling	HDA	16217013
GO:0006338	Process	Chromatin remodeling	IDA	9790534, 16428440
GO:0006346	Process	DNA methylation-dependent constitutive heterochromatin formation	IBA
GO:0008327	Function	Methyl-CpG binding	IBA
GO:0008327	Function	Methyl-CpG binding	IDA	24307175
GO:0008327	Function	Methyl-CpG binding	IEA
GO:0009888	Process	Tissue development	IEA
GO:0016581	Component	NuRD complex	IDA	33283408
GO:0016581	Component	NuRD complex	IEA
GO:0016581	Component	NuRD complex	NAS	16428440, 17827154
GO:0031492	Function	Nucleosomal DNA binding	HDA	16217013
GO:0031667	Process	Response to nutrient levels	IEA
GO:0032355	Process	Response to estradiol	IEA
GO:0032991	Component	Protein-containing complex	HDA	16217013
GO:0032991	Component	Protein-containing complex	IEA
GO:0040029	Process	Epigenetic regulation of gene expression	IEA
GO:0042659	Process	Regulation of cell fate specification	NAS	22560079
GO:0045892	Process	Negative regulation of DNA-templated transcription	NAS	22560079
GO:0045893	Process	Positive regulation of DNA-templated transcription	NAS	19927129
GO:0048568	Process	Embryonic organ development	IEA
GO:1903925	Process	Response to bisphenol A	IEA
GO:2000736	Process	Regulation of stem cell differentiation	NAS	22560079

Other IDs

• MIM: 603573
• HGNC: 6918
• e!Ensembl: ENSG00000071655

Protein

• UniProt ID: O95983
• Protein name: Methyl-CpG-binding domain protein 3 (Methyl-CpG-binding protein MBD3)
• Protein function: Acts as a component of the histone deacetylase NuRD complex which participates in the remodeling of chromatin (PubMed:12124384, PubMed:16428440, PubMed:28977666). Acts as transcriptional repressor and plays a role in gene silencing (PubMed:10947
• PDB: 2MB7, 6CC8, 6CCG, 6CEU, 6CEV
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF01429	MBD	1 → 72	Methyl-CpG binding domain	Domain
  PF16564	MBDa	79 → 148	p55-binding region of Methyl-CpG-binding domain proteins MBD	Domain
  PF14048	MBD_C	152 → 243	C-terminal domain of methyl-CpG binding protein 2 and 3	Family

• Sequence:

  MERKRWECPALPQGWEREEVPRRSGLSAGHRDVFYYSPSGKKFRSKPQLARYLGGSMDLS
  TFDFRTGKMLMSKMNKSRQRVRYDSSNQVKGKPDLNTALPVRQTASIFKQPVTKITNHPS
  NKVKSDPQKAVDQPRQLFWEKKLSGLNAFDIAEELVKTMDLPKGLQGVGPGCTDETLLSA
  IASALHTSTMPITGQLSAAVEKNPGVWLNTTQPLCKAFMVTDEDIRKQEELVQQVRKRLE
  EALMADMLAHVEELARDGEAPLDKACAEDDDEEDEEEEEEEPDPDPEMEHV

• Sequence length: 291

Pathways

KEGG:

ATP-dependent chromatin remodeling

Reactome:

HDACs deacetylate histones
Regulation of TP53 Activity through Acetylation
RNA Polymerase I Transcription Initiation
Regulation of PTEN gene transcription