Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene miRNA Gene ontology Other IDs Protein Pathways
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	53615
Gene name Gene Name - the full gene name approved by the HGNC.	Methyl-CpG binding domain protein 3
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	MBD3
Synonyms (NCBI Gene) Gene synonyms aliases	-
Chromosome Chromosome number	19
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	19p13.3
Summary Summary of gene provided in NCBI Entrez Gene.	DNA methylation is the major modification of eukaryotic genomes and plays an essential role in mammalian development. This gene belongs to a family of nuclear proteins which are characterized by the presence of a methyl-CpG binding domain (MBD). The encod

Show/Hide all(504)

miRTarBase ID	miRNA	Experiments	Reference
MIRT022788	hsa-miR-124-3p	Proteomics;Microarray	18668037
MIRT037081	hsa-miR-877-3p	CLASH	23622248
MIRT625053	hsa-miR-508-5p	HITS-CLIP	23824327
MIRT625052	hsa-miR-1288-5p	HITS-CLIP	23824327
MIRT625051	hsa-miR-1273g-3p	HITS-CLIP	23824327
MIRT625050	hsa-miR-6849-3p	HITS-CLIP	23824327
MIRT625049	hsa-miR-1914-5p	HITS-CLIP	23824327
MIRT625048	hsa-miR-766-3p	HITS-CLIP	23824327
MIRT625047	hsa-miR-4793-3p	HITS-CLIP	23824327
MIRT625046	hsa-miR-4252	HITS-CLIP	23824327
MIRT625045	hsa-miR-6811-3p	HITS-CLIP	23824327
MIRT625044	hsa-miR-19a-3p	HITS-CLIP	23824327
MIRT625043	hsa-miR-19b-3p	HITS-CLIP	23824327
MIRT625042	hsa-miR-6512-3p	HITS-CLIP	23824327
MIRT625041	hsa-miR-6720-5p	HITS-CLIP	23824327
MIRT625040	hsa-miR-7703	HITS-CLIP	23824327
MIRT625053	hsa-miR-508-5p	HITS-CLIP	23824327
MIRT625051	hsa-miR-1273g-3p	HITS-CLIP	23824327
MIRT625050	hsa-miR-6849-3p	HITS-CLIP	23824327
MIRT625049	hsa-miR-1914-5p	HITS-CLIP	23824327
MIRT625048	hsa-miR-766-3p	HITS-CLIP	23824327
MIRT625047	hsa-miR-4793-3p	HITS-CLIP	23824327
MIRT625046	hsa-miR-4252	HITS-CLIP	23824327
MIRT625045	hsa-miR-6811-3p	HITS-CLIP	23824327
MIRT625044	hsa-miR-19a-3p	HITS-CLIP	23824327
MIRT625043	hsa-miR-19b-3p	HITS-CLIP	23824327
MIRT625042	hsa-miR-6512-3p	HITS-CLIP	23824327
MIRT625041	hsa-miR-6720-5p	HITS-CLIP	23824327
MIRT625040	hsa-miR-7703	HITS-CLIP	23824327
MIRT625053	hsa-miR-508-5p	HITS-CLIP	23824327
MIRT625052	hsa-miR-1288-5p	HITS-CLIP	23824327
MIRT625051	hsa-miR-1273g-3p	HITS-CLIP	23824327
MIRT625050	hsa-miR-6849-3p	HITS-CLIP	23824327
MIRT625049	hsa-miR-1914-5p	HITS-CLIP	23824327
MIRT625048	hsa-miR-766-3p	HITS-CLIP	23824327
MIRT625047	hsa-miR-4793-3p	HITS-CLIP	23824327
MIRT625046	hsa-miR-4252	HITS-CLIP	23824327
MIRT625045	hsa-miR-6811-3p	HITS-CLIP	23824327
MIRT625044	hsa-miR-19a-3p	HITS-CLIP	23824327
MIRT625043	hsa-miR-19b-3p	HITS-CLIP	23824327
MIRT625042	hsa-miR-6512-3p	HITS-CLIP	23824327
MIRT625041	hsa-miR-6720-5p	HITS-CLIP	23824327
MIRT625040	hsa-miR-7703	HITS-CLIP	23824327
MIRT625053	hsa-miR-508-5p	HITS-CLIP	23824327
MIRT625051	hsa-miR-1273g-3p	HITS-CLIP	23824327
MIRT625050	hsa-miR-6849-3p	HITS-CLIP	23824327
MIRT625049	hsa-miR-1914-5p	HITS-CLIP	23824327
MIRT625048	hsa-miR-766-3p	HITS-CLIP	23824327
MIRT625047	hsa-miR-4793-3p	HITS-CLIP	23824327
MIRT625046	hsa-miR-4252	HITS-CLIP	23824327
MIRT625045	hsa-miR-6811-3p	HITS-CLIP	23824327
MIRT625044	hsa-miR-19a-3p	HITS-CLIP	23824327
MIRT625043	hsa-miR-19b-3p	HITS-CLIP	23824327
MIRT625042	hsa-miR-6512-3p	HITS-CLIP	23824327
MIRT625041	hsa-miR-6720-5p	HITS-CLIP	23824327
MIRT625040	hsa-miR-7703	HITS-CLIP	23824327
MIRT625053	hsa-miR-508-5p	HITS-CLIP	23824327
MIRT625052	hsa-miR-1288-5p	HITS-CLIP	23824327
MIRT625051	hsa-miR-1273g-3p	HITS-CLIP	23824327
MIRT625050	hsa-miR-6849-3p	HITS-CLIP	23824327
MIRT625049	hsa-miR-1914-5p	HITS-CLIP	23824327
MIRT625048	hsa-miR-766-3p	HITS-CLIP	23824327
MIRT625047	hsa-miR-4793-3p	HITS-CLIP	23824327
MIRT625046	hsa-miR-4252	HITS-CLIP	23824327
MIRT625045	hsa-miR-6811-3p	HITS-CLIP	23824327
MIRT625044	hsa-miR-19a-3p	HITS-CLIP	23824327
MIRT625043	hsa-miR-19b-3p	HITS-CLIP	23824327
MIRT625042	hsa-miR-6512-3p	HITS-CLIP	23824327
MIRT625041	hsa-miR-6720-5p	HITS-CLIP	23824327
MIRT625040	hsa-miR-7703	HITS-CLIP	23824327
MIRT625052	hsa-miR-1288-5p	HITS-CLIP	23824327
MIRT625051	hsa-miR-1273g-3p	HITS-CLIP	23824327
MIRT625049	hsa-miR-1914-5p	HITS-CLIP	23824327
MIRT625048	hsa-miR-766-3p	HITS-CLIP	23824327
MIRT625047	hsa-miR-4793-3p	HITS-CLIP	23824327
MIRT625046	hsa-miR-4252	HITS-CLIP	23824327
MIRT625045	hsa-miR-6811-3p	HITS-CLIP	23824327
MIRT625044	hsa-miR-19a-3p	HITS-CLIP	23824327
MIRT625043	hsa-miR-19b-3p	HITS-CLIP	23824327
MIRT625053	hsa-miR-508-5p	HITS-CLIP	23824327
MIRT625052	hsa-miR-1288-5p	HITS-CLIP	23824327
MIRT625051	hsa-miR-1273g-3p	HITS-CLIP	23824327
MIRT625050	hsa-miR-6849-3p	HITS-CLIP	23824327
MIRT625049	hsa-miR-1914-5p	HITS-CLIP	23824327
MIRT625048	hsa-miR-766-3p	HITS-CLIP	23824327
MIRT625047	hsa-miR-4793-3p	HITS-CLIP	23824327
MIRT625046	hsa-miR-4252	HITS-CLIP	23824327
MIRT625045	hsa-miR-6811-3p	HITS-CLIP	23824327
MIRT625044	hsa-miR-19a-3p	HITS-CLIP	23824327
MIRT625043	hsa-miR-19b-3p	HITS-CLIP	23824327
MIRT625042	hsa-miR-6512-3p	HITS-CLIP	23824327
MIRT625041	hsa-miR-6720-5p	HITS-CLIP	23824327
MIRT625040	hsa-miR-7703	HITS-CLIP	23824327
MIRT625053	hsa-miR-508-5p	HITS-CLIP	23824327
MIRT625052	hsa-miR-1288-5p	HITS-CLIP	23824327
MIRT625051	hsa-miR-1273g-3p	HITS-CLIP	23824327
MIRT625050	hsa-miR-6849-3p	HITS-CLIP	23824327
MIRT625049	hsa-miR-1914-5p	HITS-CLIP	23824327
MIRT625048	hsa-miR-766-3p	HITS-CLIP	23824327
MIRT625047	hsa-miR-4793-3p	HITS-CLIP	23824327
MIRT625046	hsa-miR-4252	HITS-CLIP	23824327
MIRT625045	hsa-miR-6811-3p	HITS-CLIP	23824327
MIRT625044	hsa-miR-19a-3p	HITS-CLIP	23824327
MIRT625043	hsa-miR-19b-3p	HITS-CLIP	23824327
MIRT625042	hsa-miR-6512-3p	HITS-CLIP	23824327
MIRT625041	hsa-miR-6720-5p	HITS-CLIP	23824327
MIRT625040	hsa-miR-7703	HITS-CLIP	23824327
MIRT625053	hsa-miR-508-5p	HITS-CLIP	23824327
MIRT625051	hsa-miR-1273g-3p	HITS-CLIP	23824327
MIRT625050	hsa-miR-6849-3p	HITS-CLIP	23824327
MIRT625049	hsa-miR-1914-5p	HITS-CLIP	23824327
MIRT625048	hsa-miR-766-3p	HITS-CLIP	23824327
MIRT625047	hsa-miR-4793-3p	HITS-CLIP	23824327
MIRT625046	hsa-miR-4252	HITS-CLIP	23824327
MIRT625045	hsa-miR-6811-3p	HITS-CLIP	23824327
MIRT625044	hsa-miR-19a-3p	HITS-CLIP	23824327
MIRT625043	hsa-miR-19b-3p	HITS-CLIP	23824327
MIRT625042	hsa-miR-6512-3p	HITS-CLIP	23824327
MIRT625041	hsa-miR-6720-5p	HITS-CLIP	23824327
MIRT625040	hsa-miR-7703	HITS-CLIP	23824327
MIRT625053	hsa-miR-508-5p	HITS-CLIP	23824327
MIRT625052	hsa-miR-1288-5p	HITS-CLIP	23824327
MIRT625051	hsa-miR-1273g-3p	HITS-CLIP	23824327
MIRT625050	hsa-miR-6849-3p	HITS-CLIP	23824327
MIRT625049	hsa-miR-1914-5p	HITS-CLIP	23824327
MIRT625048	hsa-miR-766-3p	HITS-CLIP	23824327
MIRT625047	hsa-miR-4793-3p	HITS-CLIP	23824327
MIRT625046	hsa-miR-4252	HITS-CLIP	23824327
MIRT625045	hsa-miR-6811-3p	HITS-CLIP	23824327
MIRT625044	hsa-miR-19a-3p	HITS-CLIP	23824327
MIRT625043	hsa-miR-19b-3p	HITS-CLIP	23824327
MIRT625042	hsa-miR-6512-3p	HITS-CLIP	23824327
MIRT625041	hsa-miR-6720-5p	HITS-CLIP	23824327
MIRT625040	hsa-miR-7703	HITS-CLIP	23824327
MIRT625053	hsa-miR-508-5p	HITS-CLIP	23824327
MIRT625051	hsa-miR-1273g-3p	HITS-CLIP	23824327
MIRT625050	hsa-miR-6849-3p	HITS-CLIP	23824327
MIRT625049	hsa-miR-1914-5p	HITS-CLIP	23824327
MIRT625048	hsa-miR-766-3p	HITS-CLIP	23824327
MIRT625047	hsa-miR-4793-3p	HITS-CLIP	23824327
MIRT625046	hsa-miR-4252	HITS-CLIP	23824327
MIRT625045	hsa-miR-6811-3p	HITS-CLIP	23824327
MIRT625044	hsa-miR-19a-3p	HITS-CLIP	23824327
MIRT625043	hsa-miR-19b-3p	HITS-CLIP	23824327
MIRT625042	hsa-miR-6512-3p	HITS-CLIP	23824327
MIRT625041	hsa-miR-6720-5p	HITS-CLIP	23824327
MIRT625040	hsa-miR-7703	HITS-CLIP	23824327
MIRT625053	hsa-miR-508-5p	HITS-CLIP	23824327
MIRT625052	hsa-miR-1288-5p	HITS-CLIP	23824327
MIRT625051	hsa-miR-1273g-3p	HITS-CLIP	23824327
MIRT625050	hsa-miR-6849-3p	HITS-CLIP	23824327
MIRT625049	hsa-miR-1914-5p	HITS-CLIP	23824327
MIRT625048	hsa-miR-766-3p	HITS-CLIP	23824327
MIRT625047	hsa-miR-4793-3p	HITS-CLIP	23824327
MIRT625046	hsa-miR-4252	HITS-CLIP	23824327
MIRT625045	hsa-miR-6811-3p	HITS-CLIP	23824327
MIRT625044	hsa-miR-19a-3p	HITS-CLIP	23824327
MIRT625043	hsa-miR-19b-3p	HITS-CLIP	23824327
MIRT625042	hsa-miR-6512-3p	HITS-CLIP	23824327
MIRT625041	hsa-miR-6720-5p	HITS-CLIP	23824327
MIRT625040	hsa-miR-7703	HITS-CLIP	23824327
MIRT625052	hsa-miR-1288-5p	HITS-CLIP	23824327
MIRT625051	hsa-miR-1273g-3p	HITS-CLIP	23824327
MIRT625049	hsa-miR-1914-5p	HITS-CLIP	23824327
MIRT625048	hsa-miR-766-3p	HITS-CLIP	23824327
MIRT625047	hsa-miR-4793-3p	HITS-CLIP	23824327
MIRT625046	hsa-miR-4252	HITS-CLIP	23824327
MIRT625045	hsa-miR-6811-3p	HITS-CLIP	23824327
MIRT625044	hsa-miR-19a-3p	HITS-CLIP	23824327
MIRT625043	hsa-miR-19b-3p	HITS-CLIP	23824327
MIRT625053	hsa-miR-508-5p	HITS-CLIP	23824327
MIRT625052	hsa-miR-1288-5p	HITS-CLIP	23824327
MIRT625051	hsa-miR-1273g-3p	HITS-CLIP	23824327
MIRT625050	hsa-miR-6849-3p	HITS-CLIP	23824327
MIRT625049	hsa-miR-1914-5p	HITS-CLIP	23824327
MIRT625048	hsa-miR-766-3p	HITS-CLIP	23824327
MIRT625047	hsa-miR-4793-3p	HITS-CLIP	23824327
MIRT625046	hsa-miR-4252	HITS-CLIP	23824327
MIRT625045	hsa-miR-6811-3p	HITS-CLIP	23824327
MIRT625044	hsa-miR-19a-3p	HITS-CLIP	23824327
MIRT625043	hsa-miR-19b-3p	HITS-CLIP	23824327
MIRT625042	hsa-miR-6512-3p	HITS-CLIP	23824327
MIRT625041	hsa-miR-6720-5p	HITS-CLIP	23824327
MIRT625040	hsa-miR-7703	HITS-CLIP	23824327
MIRT1134928	hsa-miR-1179	CLIP-seq
MIRT1134929	hsa-miR-1182	CLIP-seq
MIRT1134930	hsa-miR-1193	CLIP-seq
MIRT1134931	hsa-miR-1207-5p	CLIP-seq
MIRT1134932	hsa-miR-124	CLIP-seq
MIRT1134933	hsa-miR-128	CLIP-seq
MIRT1134934	hsa-miR-1285	CLIP-seq
MIRT1134935	hsa-miR-1321	CLIP-seq
MIRT1134936	hsa-miR-151-5p	CLIP-seq
MIRT1134937	hsa-miR-151b	CLIP-seq
MIRT1134938	hsa-miR-1910	CLIP-seq
MIRT1134939	hsa-miR-1913	CLIP-seq
MIRT1134940	hsa-miR-193a-3p	CLIP-seq
MIRT1134941	hsa-miR-193a-5p	CLIP-seq
MIRT1134942	hsa-miR-193b	CLIP-seq
MIRT1134943	hsa-miR-214	CLIP-seq
MIRT1134944	hsa-miR-27a	CLIP-seq
MIRT1134945	hsa-miR-27b	CLIP-seq
MIRT1134946	hsa-miR-28-5p	CLIP-seq
MIRT1134947	hsa-miR-3125	CLIP-seq
MIRT1134948	hsa-miR-3128	CLIP-seq
MIRT1134949	hsa-miR-3135b	CLIP-seq
MIRT1134950	hsa-miR-3137	CLIP-seq
MIRT1134951	hsa-miR-3139	CLIP-seq
MIRT1134952	hsa-miR-3144-5p	CLIP-seq
MIRT1134953	hsa-miR-3152-3p	CLIP-seq
MIRT1134954	hsa-miR-3162-5p	CLIP-seq
MIRT1134955	hsa-miR-3176	CLIP-seq
MIRT1134956	hsa-miR-3187-5p	CLIP-seq
MIRT1134957	hsa-miR-3189-5p	CLIP-seq
MIRT1134958	hsa-miR-3191	CLIP-seq
MIRT1134959	hsa-miR-3195	CLIP-seq
MIRT1134960	hsa-miR-3199	CLIP-seq
MIRT1134961	hsa-miR-324-3p	CLIP-seq
MIRT1134962	hsa-miR-34a	CLIP-seq
MIRT1134963	hsa-miR-34c-5p	CLIP-seq
MIRT1134964	hsa-miR-3616-3p	CLIP-seq
MIRT1134965	hsa-miR-3619-5p	CLIP-seq
MIRT1134966	hsa-miR-3652	CLIP-seq
MIRT1134967	hsa-miR-3663-3p	CLIP-seq
MIRT1134968	hsa-miR-3664-5p	CLIP-seq
MIRT1134969	hsa-miR-3691-3p	CLIP-seq
MIRT1134970	hsa-miR-3916	CLIP-seq
MIRT1134971	hsa-miR-3918	CLIP-seq
MIRT1134972	hsa-miR-3922-3p	CLIP-seq
MIRT1134973	hsa-miR-4270	CLIP-seq
MIRT1134974	hsa-miR-4323	CLIP-seq
MIRT1134975	hsa-miR-4419a	CLIP-seq
MIRT1134976	hsa-miR-4430	CLIP-seq
MIRT1134977	hsa-miR-4431	CLIP-seq
MIRT1134978	hsa-miR-4441	CLIP-seq
MIRT1134979	hsa-miR-4447	CLIP-seq
MIRT1134980	hsa-miR-4459	CLIP-seq
MIRT1134981	hsa-miR-4472	CLIP-seq
MIRT1134982	hsa-miR-4487	CLIP-seq
MIRT1134983	hsa-miR-4488	CLIP-seq
MIRT1134984	hsa-miR-449a	CLIP-seq
MIRT1134985	hsa-miR-449b	CLIP-seq
MIRT1134986	hsa-miR-4508	CLIP-seq
MIRT1134987	hsa-miR-4510	CLIP-seq
MIRT1134988	hsa-miR-4514	CLIP-seq
MIRT1134989	hsa-miR-4515	CLIP-seq
MIRT1134990	hsa-miR-4522	CLIP-seq
MIRT1134991	hsa-miR-455-3p	CLIP-seq
MIRT1134992	hsa-miR-4640-5p	CLIP-seq
MIRT1134993	hsa-miR-4641	CLIP-seq
MIRT1134994	hsa-miR-4645-5p	CLIP-seq
MIRT1134995	hsa-miR-4652-5p	CLIP-seq
MIRT1134996	hsa-miR-4653-3p	CLIP-seq
MIRT1134997	hsa-miR-4673	CLIP-seq
MIRT1134998	hsa-miR-4691-3p	CLIP-seq
MIRT1134999	hsa-miR-4692	CLIP-seq
MIRT1135000	hsa-miR-4697-5p	CLIP-seq
MIRT1135001	hsa-miR-4699-3p	CLIP-seq
MIRT1135002	hsa-miR-4720-5p	CLIP-seq
MIRT1135003	hsa-miR-4726-5p	CLIP-seq
MIRT1135004	hsa-miR-4732-5p	CLIP-seq
MIRT1135005	hsa-miR-4733-3p	CLIP-seq
MIRT1135006	hsa-miR-4739	CLIP-seq
MIRT1135007	hsa-miR-4747-5p	CLIP-seq
MIRT1135008	hsa-miR-4755-3p	CLIP-seq
MIRT1135009	hsa-miR-4756-5p	CLIP-seq
MIRT1135010	hsa-miR-4757-3p	CLIP-seq
MIRT1135011	hsa-miR-4757-5p	CLIP-seq
MIRT1135012	hsa-miR-4763-3p	CLIP-seq
MIRT1135013	hsa-miR-4779	CLIP-seq
MIRT1135014	hsa-miR-4795-5p	CLIP-seq
MIRT1135015	hsa-miR-4799-3p	CLIP-seq
MIRT1135016	hsa-miR-486-3p	CLIP-seq
MIRT1135017	hsa-miR-491-5p	CLIP-seq
MIRT1135018	hsa-miR-506	CLIP-seq
MIRT1135019	hsa-miR-612	CLIP-seq
MIRT1135020	hsa-miR-637	CLIP-seq
MIRT1135021	hsa-miR-665	CLIP-seq
MIRT1135022	hsa-miR-708	CLIP-seq
MIRT1135023	hsa-miR-761	CLIP-seq
MIRT1135024	hsa-miR-877	CLIP-seq
MIRT1135025	hsa-miR-885-3p	CLIP-seq
MIRT1135026	hsa-miR-892a	CLIP-seq
MIRT1135027	hsa-miR-940	CLIP-seq
MIRT1135028	hsa-miR-941	CLIP-seq
MIRT1134964	hsa-miR-3616-3p	CLIP-seq
MIRT1134928	hsa-miR-1179	CLIP-seq
MIRT2038344	hsa-miR-1185	CLIP-seq
MIRT1134930	hsa-miR-1193	CLIP-seq
MIRT2038345	hsa-miR-1200	CLIP-seq
MIRT1134931	hsa-miR-1207-5p	CLIP-seq
MIRT2038346	hsa-miR-1225-3p	CLIP-seq
MIRT2038347	hsa-miR-1233	CLIP-seq
MIRT2038348	hsa-miR-1247	CLIP-seq
MIRT1134933	hsa-miR-128	CLIP-seq
MIRT2038349	hsa-miR-1291	CLIP-seq
MIRT2038350	hsa-miR-146b-3p	CLIP-seq
MIRT2038351	hsa-miR-1827	CLIP-seq
MIRT2038352	hsa-miR-2113	CLIP-seq
MIRT1134943	hsa-miR-214	CLIP-seq
MIRT2038353	hsa-miR-218	CLIP-seq
MIRT1134944	hsa-miR-27a	CLIP-seq
MIRT1134945	hsa-miR-27b	CLIP-seq
MIRT1134946	hsa-miR-28-5p	CLIP-seq
MIRT2038354	hsa-miR-2861	CLIP-seq
MIRT2038355	hsa-miR-3064-5p	CLIP-seq
MIRT2038356	hsa-miR-3065-3p	CLIP-seq
MIRT1134948	hsa-miR-3128	CLIP-seq
MIRT1134951	hsa-miR-3139	CLIP-seq
MIRT1134953	hsa-miR-3152-3p	CLIP-seq
MIRT2038357	hsa-miR-3173-5p	CLIP-seq
MIRT2038358	hsa-miR-3183	CLIP-seq
MIRT1134959	hsa-miR-3195	CLIP-seq
MIRT2038359	hsa-miR-320a	CLIP-seq
MIRT2038360	hsa-miR-320b	CLIP-seq
MIRT2038361	hsa-miR-320c	CLIP-seq
MIRT2038362	hsa-miR-320d	CLIP-seq
MIRT2038363	hsa-miR-320e	CLIP-seq
MIRT2038364	hsa-miR-328	CLIP-seq
MIRT2038365	hsa-miR-3605-5p	CLIP-seq
MIRT1134965	hsa-miR-3619-5p	CLIP-seq
MIRT1134966	hsa-miR-3652	CLIP-seq
MIRT2038366	hsa-miR-3679-5p	CLIP-seq
MIRT2038367	hsa-miR-3974	CLIP-seq
MIRT2038368	hsa-miR-4324	CLIP-seq
MIRT2038369	hsa-miR-4429	CLIP-seq
MIRT1134976	hsa-miR-4430	CLIP-seq
MIRT1134977	hsa-miR-4431	CLIP-seq
MIRT2038370	hsa-miR-4436b-3p	CLIP-seq
MIRT1134982	hsa-miR-4487	CLIP-seq
MIRT2038371	hsa-miR-4505	CLIP-seq
MIRT1134988	hsa-miR-4514	CLIP-seq
MIRT1134990	hsa-miR-4522	CLIP-seq
MIRT1134991	hsa-miR-455-3p	CLIP-seq
MIRT2038372	hsa-miR-4638-5p	CLIP-seq
MIRT2038373	hsa-miR-4655-3p	CLIP-seq
MIRT2038374	hsa-miR-4670-5p	CLIP-seq
MIRT1134998	hsa-miR-4691-3p	CLIP-seq
MIRT1134999	hsa-miR-4692	CLIP-seq
MIRT2038375	hsa-miR-4693-3p	CLIP-seq
MIRT2038376	hsa-miR-4714-5p	CLIP-seq
MIRT1135002	hsa-miR-4720-5p	CLIP-seq
MIRT2038377	hsa-miR-4723-3p	CLIP-seq
MIRT2038378	hsa-miR-4731-5p	CLIP-seq
MIRT1135007	hsa-miR-4747-5p	CLIP-seq
MIRT1135010	hsa-miR-4757-3p	CLIP-seq
MIRT1135012	hsa-miR-4763-3p	CLIP-seq
MIRT2038379	hsa-miR-4780	CLIP-seq
MIRT1135015	hsa-miR-4799-3p	CLIP-seq
MIRT1135016	hsa-miR-486-3p	CLIP-seq
MIRT2038380	hsa-miR-544b	CLIP-seq
MIRT2038381	hsa-miR-550a	CLIP-seq
MIRT2038382	hsa-miR-636	CLIP-seq
MIRT2038383	hsa-miR-642a	CLIP-seq
MIRT1135022	hsa-miR-708	CLIP-seq
MIRT1135023	hsa-miR-761	CLIP-seq
MIRT2038384	hsa-miR-874	CLIP-seq
MIRT1135025	hsa-miR-885-3p	CLIP-seq
MIRT1135026	hsa-miR-892a	CLIP-seq
MIRT1135027	hsa-miR-940	CLIP-seq
MIRT2038344	hsa-miR-1185	CLIP-seq
MIRT2038348	hsa-miR-1247	CLIP-seq
MIRT2268242	hsa-miR-1271	CLIP-seq
MIRT1134933	hsa-miR-128	CLIP-seq
MIRT2268243	hsa-miR-1302	CLIP-seq
MIRT2268244	hsa-miR-1306	CLIP-seq
MIRT1134938	hsa-miR-1910	CLIP-seq
MIRT1134939	hsa-miR-1913	CLIP-seq
MIRT2268245	hsa-miR-2277-3p	CLIP-seq
MIRT1134944	hsa-miR-27a	CLIP-seq
MIRT1134945	hsa-miR-27b	CLIP-seq
MIRT1134946	hsa-miR-28-5p	CLIP-seq
MIRT1134951	hsa-miR-3139	CLIP-seq
MIRT1134961	hsa-miR-324-3p	CLIP-seq
MIRT2268246	hsa-miR-331-3p	CLIP-seq
MIRT2038365	hsa-miR-3605-5p	CLIP-seq
MIRT1134966	hsa-miR-3652	CLIP-seq
MIRT2038366	hsa-miR-3679-5p	CLIP-seq
MIRT2268247	hsa-miR-3942-3p	CLIP-seq
MIRT1134973	hsa-miR-4270	CLIP-seq
MIRT2268248	hsa-miR-4292	CLIP-seq
MIRT2268249	hsa-miR-4298	CLIP-seq
MIRT1134976	hsa-miR-4430	CLIP-seq
MIRT1134977	hsa-miR-4431	CLIP-seq
MIRT1134978	hsa-miR-4441	CLIP-seq
MIRT1134982	hsa-miR-4487	CLIP-seq
MIRT1134990	hsa-miR-4522	CLIP-seq
MIRT1134991	hsa-miR-455-3p	CLIP-seq
MIRT1134993	hsa-miR-4641	CLIP-seq
MIRT1135007	hsa-miR-4747-5p	CLIP-seq
MIRT1135010	hsa-miR-4757-3p	CLIP-seq
MIRT1135016	hsa-miR-486-3p	CLIP-seq
MIRT2268250	hsa-miR-513c	CLIP-seq
MIRT2268251	hsa-miR-514b-5p	CLIP-seq
MIRT1135022	hsa-miR-708	CLIP-seq
MIRT1135025	hsa-miR-885-3p	CLIP-seq
MIRT2268252	hsa-miR-96	CLIP-seq
MIRT2268242	hsa-miR-1271	CLIP-seq
MIRT1134933	hsa-miR-128	CLIP-seq
MIRT2268244	hsa-miR-1306	CLIP-seq
MIRT2038355	hsa-miR-3064-5p	CLIP-seq
MIRT2390663	hsa-miR-3925-3p	CLIP-seq
MIRT2268247	hsa-miR-3942-3p	CLIP-seq
MIRT1134996	hsa-miR-4653-3p	CLIP-seq
MIRT1135007	hsa-miR-4747-5p	CLIP-seq
MIRT1135010	hsa-miR-4757-3p	CLIP-seq
MIRT2390664	hsa-miR-604	CLIP-seq
MIRT2390665	hsa-miR-647	CLIP-seq
MIRT2390666	hsa-miR-659	CLIP-seq
MIRT2390667	hsa-miR-766	CLIP-seq
MIRT2268252	hsa-miR-96	CLIP-seq
MIRT2453797	hsa-miR-10a	CLIP-seq
MIRT2453798	hsa-miR-10b	CLIP-seq
MIRT2453799	hsa-miR-3620	CLIP-seq
MIRT2453797	hsa-miR-10a	CLIP-seq
MIRT2453798	hsa-miR-10b	CLIP-seq
MIRT2453799	hsa-miR-3620	CLIP-seq
MIRT2453797	hsa-miR-10a	CLIP-seq
MIRT2453798	hsa-miR-10b	CLIP-seq
MIRT2567896	hsa-miR-1202	CLIP-seq
MIRT1134934	hsa-miR-1285	CLIP-seq
MIRT2567897	hsa-miR-1324	CLIP-seq
MIRT2567898	hsa-miR-1470	CLIP-seq
MIRT2567899	hsa-miR-1471	CLIP-seq
MIRT2567900	hsa-miR-15a	CLIP-seq
MIRT2567901	hsa-miR-15b	CLIP-seq
MIRT2567902	hsa-miR-16	CLIP-seq
MIRT2567903	hsa-miR-195	CLIP-seq
MIRT1134943	hsa-miR-214	CLIP-seq
MIRT2567904	hsa-miR-22	CLIP-seq
MIRT2567905	hsa-miR-3166	CLIP-seq
MIRT1134956	hsa-miR-3187-5p	CLIP-seq
MIRT2567906	hsa-miR-3189-3p	CLIP-seq
MIRT2567907	hsa-miR-3194-5p	CLIP-seq
MIRT1134964	hsa-miR-3616-3p	CLIP-seq
MIRT1134965	hsa-miR-3619-5p	CLIP-seq
MIRT2453799	hsa-miR-3620	CLIP-seq
MIRT2567908	hsa-miR-3621	CLIP-seq
MIRT2567909	hsa-miR-3656	CLIP-seq
MIRT1134971	hsa-miR-3918	CLIP-seq
MIRT2567910	hsa-miR-3972	CLIP-seq
MIRT2567911	hsa-miR-424	CLIP-seq
MIRT1134973	hsa-miR-4270	CLIP-seq
MIRT2567912	hsa-miR-432	CLIP-seq
MIRT2038370	hsa-miR-4436b-3p	CLIP-seq
MIRT1134978	hsa-miR-4441	CLIP-seq
MIRT2567913	hsa-miR-4443	CLIP-seq
MIRT2567914	hsa-miR-4469	CLIP-seq
MIRT1134988	hsa-miR-4514	CLIP-seq
MIRT1134992	hsa-miR-4640-5p	CLIP-seq
MIRT1134994	hsa-miR-4645-5p	CLIP-seq
MIRT2567915	hsa-miR-4667-3p	CLIP-seq
MIRT1134997	hsa-miR-4673	CLIP-seq
MIRT2567916	hsa-miR-4687-5p	CLIP-seq
MIRT2567917	hsa-miR-4690-3p	CLIP-seq
MIRT1134999	hsa-miR-4692	CLIP-seq
MIRT1135003	hsa-miR-4726-5p	CLIP-seq
MIRT1135005	hsa-miR-4733-3p	CLIP-seq
MIRT2567918	hsa-miR-497	CLIP-seq
MIRT2567919	hsa-miR-516a-3p	CLIP-seq
MIRT1135019	hsa-miR-612	CLIP-seq
MIRT1135023	hsa-miR-761	CLIP-seq
MIRT2453797	hsa-miR-10a	CLIP-seq
MIRT2453798	hsa-miR-10b	CLIP-seq
MIRT2567896	hsa-miR-1202	CLIP-seq
MIRT2684701	hsa-miR-1224-3p	CLIP-seq
MIRT2567897	hsa-miR-1324	CLIP-seq
MIRT2567898	hsa-miR-1470	CLIP-seq
MIRT2567900	hsa-miR-15a	CLIP-seq
MIRT2567901	hsa-miR-15b	CLIP-seq
MIRT2567902	hsa-miR-16	CLIP-seq
MIRT2567903	hsa-miR-195	CLIP-seq
MIRT1134943	hsa-miR-214	CLIP-seq
MIRT2567904	hsa-miR-22	CLIP-seq
MIRT2567905	hsa-miR-3166	CLIP-seq
MIRT2567906	hsa-miR-3189-3p	CLIP-seq
MIRT2567907	hsa-miR-3194-5p	CLIP-seq
MIRT1134965	hsa-miR-3619-5p	CLIP-seq
MIRT2453799	hsa-miR-3620	CLIP-seq
MIRT2567908	hsa-miR-3621	CLIP-seq
MIRT2567909	hsa-miR-3656	CLIP-seq
MIRT2567910	hsa-miR-3972	CLIP-seq
MIRT2567911	hsa-miR-424	CLIP-seq
MIRT2684702	hsa-miR-4254	CLIP-seq
MIRT1134973	hsa-miR-4270	CLIP-seq
MIRT2684703	hsa-miR-4286	CLIP-seq
MIRT2567912	hsa-miR-432	CLIP-seq
MIRT1134978	hsa-miR-4441	CLIP-seq
MIRT2567913	hsa-miR-4443	CLIP-seq
MIRT2567914	hsa-miR-4469	CLIP-seq
MIRT1134988	hsa-miR-4514	CLIP-seq
MIRT2684704	hsa-miR-4633-3p	CLIP-seq
MIRT2038372	hsa-miR-4638-5p	CLIP-seq
MIRT1134994	hsa-miR-4645-5p	CLIP-seq
MIRT2038373	hsa-miR-4655-3p	CLIP-seq
MIRT2567915	hsa-miR-4667-3p	CLIP-seq
MIRT1134997	hsa-miR-4673	CLIP-seq
MIRT2567917	hsa-miR-4690-3p	CLIP-seq
MIRT1134999	hsa-miR-4692	CLIP-seq
MIRT1135005	hsa-miR-4733-3p	CLIP-seq
MIRT2567918	hsa-miR-497	CLIP-seq
MIRT2684705	hsa-miR-619	CLIP-seq
MIRT2038383	hsa-miR-642a	CLIP-seq
MIRT1135023	hsa-miR-761	CLIP-seq

Show/Hide all(38)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000122	Process	Negative regulation of transcription by RNA polymerase II	IBA
GO:0000785	Component	Chromatin	HDA	16217013
GO:0000785	Component	Chromatin	IEA
GO:0000792	Component	Heterochromatin	IEA
GO:0001701	Process	In utero embryonic development	IEA
GO:0003229	Process	Ventricular cardiac muscle tissue development	IEA
GO:0003677	Function	DNA binding	IEA
GO:0003677	Function	DNA binding	TAS	9774669
GO:0005515	Function	Protein binding	IPI	12183469, 19703393, 20676135, 21258344, 23455924, 23752268, 24048479, 25123934, 25416956, 26496610, 32296183, 33961781, 35271311
GO:0005634	Component	Nucleus	IBA
GO:0005634	Component	Nucleus	IDA	15701600, 20523938, 28977666, 33283408
GO:0005634	Component	Nucleus	IEA
GO:0005654	Component	Nucleoplasm	IDA
GO:0005654	Component	Nucleoplasm	TAS
GO:0005694	Component	Chromosome	IEA
GO:0005737	Component	Cytoplasm	IEA
GO:0006338	Process	Chromatin remodeling	HDA	16217013
GO:0006338	Process	Chromatin remodeling	IDA	9790534, 16428440
GO:0006346	Process	DNA methylation-dependent constitutive heterochromatin formation	IBA
GO:0008327	Function	Methyl-CpG binding	IBA
GO:0008327	Function	Methyl-CpG binding	IDA	24307175
GO:0008327	Function	Methyl-CpG binding	IEA
GO:0009888	Process	Tissue development	IEA
GO:0016581	Component	NuRD complex	IDA	33283408
GO:0016581	Component	NuRD complex	IEA
GO:0016581	Component	NuRD complex	NAS	16428440, 17827154
GO:0031492	Function	Nucleosomal DNA binding	HDA	16217013
GO:0031667	Process	Response to nutrient levels	IEA
GO:0032355	Process	Response to estradiol	IEA
GO:0032991	Component	Protein-containing complex	HDA	16217013
GO:0032991	Component	Protein-containing complex	IEA
GO:0040029	Process	Epigenetic regulation of gene expression	IEA
GO:0042659	Process	Regulation of cell fate specification	NAS	22560079
GO:0045892	Process	Negative regulation of DNA-templated transcription	NAS	22560079
GO:0045893	Process	Positive regulation of DNA-templated transcription	NAS	19927129
GO:0048568	Process	Embryonic organ development	IEA
GO:1903925	Process	Response to bisphenol A	IEA
GO:2000736	Process	Regulation of stem cell differentiation	NAS	22560079

MIM	HGNC	e!Ensembl
603573	6918	ENSG00000071655

Protein

UniProt ID

O95983

Protein name

Methyl-CpG-binding domain protein 3 (Methyl-CpG-binding protein MBD3)

Protein function

Acts as a component of the histone deacetylase NuRD complex which participates in the remodeling of chromatin (PubMed:12124384, PubMed:16428440, PubMed:28977666). Acts as transcriptional repressor and plays a role in gene silencing (PubMed:10947

PDB

2MB7 , 6CC8 , 6CCG , 6CEU , 6CEV

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF01429	MBD	1 → 72	Methyl-CpG binding domain	Domain
PF16564	MBDa	79 → 148	p55-binding region of Methyl-CpG-binding domain proteins MBD	Domain
PF14048	MBD_C	152 → 243	C-terminal domain of methyl-CpG binding protein 2 and 3	Family

Sequence

MERKRWECPALPQGWEREEVPRRSGLSAGHRDVFYYSPSGKKFRSKPQLARYLGGSMDLS
TFDFRTGKMLMSKMNKSRQRVRYDSSNQVKGKPDLNTALPVRQTASIFKQPVTKITNHPS
NKVKSDPQKAVDQPRQLFWEKKLSGLNAFDIAEELVKTMDLPKGLQGVGPGCTDETLLSA
IASALHTSTMPITGQLSAAVEKNPGVWLNTTQPLCKAFMVTDEDIRKQEELVQQVRKRLE
EALMADMLAHVEELARDGEAPLDKACAEDDDEEDEEEEEEEPDPDPEMEHV

Sequence length

291

Interactions

View interactions

	KEGG		Reactome
	ATP-dependent chromatin remodeling		HDACs deacetylate histones Regulation of TP53 Activity through Acetylation RNA Polymerase I Transcription Initiation Regulation of PTEN gene transcription

MBD3 (methyl-CpG binding domain protein 3)