Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
5327
Gene name Gene Name - the full gene name approved by the HGNC.
Plasminogen activator, tissue type
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
PLAT
Synonyms (NCBI Gene) Gene synonyms aliases
T-PA, TPA
Chromosome Chromosome number
8
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
8p11.21
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes tissue-type plasminogen activator, a secreted serine protease that converts the proenzyme plasminogen to plasmin, a fibrinolytic enzyme. The encoded preproprotein is proteolytically processed by plasmin or trypsin to generate heavy and l
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs114878147 G>A Conflicting-interpretations-of-pathogenicity Missense variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT005838 hsa-miR-204-5p Microarray 21282569
MIRT005953 hsa-miR-21-5p Luciferase reporter assay, Microarray, qRT-PCR 21131358
MIRT017829 hsa-miR-335-5p Microarray 18185580
MIRT735970 hsa-miR-142-5p Microarray, qRT-PCR 31552107
MIRT1239429 hsa-miR-1178 CLIP-seq
Transcription factors
Transcription factor Regulation Reference
ATF2 Activation 8647095
CREB1 Repression 8647095
CREM Unknown 9851700
JUN Activation 1963081
JUN Unknown 9851700
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0001666 Process Response to hypoxia IEA
GO:0004252 Function Serine-type endopeptidase activity IBA
GO:0004252 Function Serine-type endopeptidase activity IDA 1695900, 8508955
GO:0004252 Function Serine-type endopeptidase activity IEA
GO:0004252 Function Serine-type endopeptidase activity TAS
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
173370 9051 ENSG00000104368
Protein
UniProt ID P00750
Protein name Tissue-type plasminogen activator (t-PA) (t-plasminogen activator) (tPA) (EC 3.4.21.68) (Alteplase) (Reteplase) [Cleaved into: Tissue-type plasminogen activator chain A; Tissue-type plasminogen activator chain B]
Protein function Converts the abundant, but inactive, zymogen plasminogen to plasmin by hydrolyzing a single Arg-Val bond in plasminogen. By controlling plasmin-mediated proteolysis, it plays an important role in tissue remodeling and degradation, in cell migrat
PDB 1A5H , 1BDA , 1PK2 , 1PML , 1RTF , 1TPG , 1TPK , 1TPM , 1TPN , 5BRR , 5ZLZ
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00039 fn1 41 78 Fibronectin type I domain Domain
PF00008 EGF 86 117 EGF-like domain Domain
PF00051 Kringle 127 208 Kringle domain Domain
PF00051 Kringle 215 296 Kringle domain Domain
PF00089 Trypsin 311 556 Trypsin Domain
Tissue specificity TISSUE SPECIFICITY: Synthesized in numerous tissues (including tumors) and secreted into most extracellular body fluids, such as plasma, uterine fluid, saliva, gingival crevicular fluid, tears, seminal fluid, and milk.
Sequence
Sequence length 562
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Apelin signaling pathway
Complement and coagulation cascades
Transcriptional misregulation in cancer
Prostate cancer
Fluid shear stress and atherosclerosis
  Signaling by PDGF
Dissolution of Fibrin Clot
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Associated diseases Disease associations categorized as Causal (pathogenic variants), Unknown (uncertain genetic evidence), or Text Mining (literature-based associations)
Unknown Includes: (1) ClinVar NON-pathogenic variants (Uncertain, Benign, Conflicting, VUS), (2) GenCC associations, (3) GWAS associations, (4) CBGDA evidence-based associations. NOTE: Diseases with pathogenic evidence are excluded to avoid conflicts.
Disease merge term Disease name Evidence References Source
Angioedema Hereditary angioedema with normal C1Inh N/A N/A ClinVar
Systemic lupus erythematosus Systemic lupus erythematosus N/A N/A GWAS
Associations from Text Mining Disease associations identified through Pubtator
Disease Name Relationship Type References
Adenocarcinoma of Lung Associate 17632087
Adenoma Associate 9006343
Allergic Fungal Sinusitis Inhibit 23155140
Angina Pectoris Variant Associate 8130024
Aortic Aneurysm Abdominal Stimulate 17543671
Aortic Aneurysm Abdominal Associate 24452721, 7552526, 7615837
Aortic Dissection Associate 9013920
Arterial Occlusive Diseases Associate 12643326
Arterial Occlusive Diseases Stimulate 25069814
Arthritis Rheumatoid Associate 16356191, 9370880