Gene Gene information from NCBI Gene database.
Entrez ID 5238
Gene name Phosphoglucomutase 3
Gene symbol PGM3
Synonyms (NCBI Gene)
AGM1IMD23PAGMPGM 3
Chromosome 6
Chromosome location 6q14.1
Summary This gene encodes a member of the phosphohexose mutase family. The encoded protein mediates both glycogen formation and utilization by catalyzing the interconversion of glucose-1-phosphate and glucose-6-phosphate. A non-synonymous single nucleotide polymo
SNPs SNP information provided by dbSNP.
12
SNP ID Visualize variation Clinical significance Consequence
rs267608259 TTC>- Pathogenic Coding sequence variant, inframe deletion, non coding transcript variant
rs267608260 A>G Pathogenic Coding sequence variant, non coding transcript variant, missense variant
rs587777414 AAGTT>- Pathogenic Non coding transcript variant, intron variant, frameshift variant, coding sequence variant
rs587777415 A>C Pathogenic Non coding transcript variant, missense variant, coding sequence variant
rs587777416 ACT>- Pathogenic Non coding transcript variant, inframe indel, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
485
miRTarBase ID miRNA Experiments Reference
MIRT023451 hsa-miR-30b-5p Sequencing 20371350
MIRT024516 hsa-miR-215-5p Microarray 19074876
MIRT026705 hsa-miR-192-5p Microarray 19074876
MIRT032419 hsa-let-7b-5p Proteomics 18668040
MIRT045722 hsa-miR-125a-5p CLASH 23622248
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
22
GO ID Ontology Definition Evidence Reference
GO:0000287 Function Magnesium ion binding IEA
GO:0004610 Function Phosphoacetylglucosamine mutase activity IBA
GO:0004610 Function Phosphoacetylglucosamine mutase activity IDA 11004509
GO:0004610 Function Phosphoacetylglucosamine mutase activity IEA
GO:0004610 Function Phosphoacetylglucosamine mutase activity IMP 24589341
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
172100 8907 ENSG00000013375
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
O95394
Protein name Phosphoacetylglucosamine mutase (PAGM) (EC 5.4.2.3) (Acetylglucosamine phosphomutase) (N-acetylglucosamine-phosphate mutase) (Phosphoglucomutase-3) (PGM 3)
Protein function Catalyzes the conversion of GlcNAc-6-P into GlcNAc-1-P during the synthesis of uridine diphosphate/UDP-GlcNAc, a sugar nucleotide critical to multiple glycosylation pathways including protein N- and O-glycosylation. {ECO:0000303|PubMed:24589341,
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF02878 PGM_PMM_I 44 102 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Domain
PF02878 PGM_PMM_I 103 198 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Domain
PF00408 PGM_PMM_IV 431 528 Phosphoglucomutase/phosphomannomutase, C-terminal domain Family
Tissue specificity TISSUE SPECIFICITY: Found in many tissues except lung. Relatively high expression in pancreas, heart, liver, and placenta, and relatively low expression in brain, skeletal muscle and kidney. {ECO:0000269|PubMed:10721701}.
Sequence
MDLGAITKYSALHAKPNGLILQYGTAGFRTKAEHLDHVMFRMGLLAVLRSKQTKSTIGVM
VTASHNPEEDNGVKLVDPLGEMLAPSWEEHATCLANAEEQDM
QRVLIDISEKEAVNLQQD
AFVVIGRDTRPSSEKLSQSVIDGVTVLGGQFHDYGLLTTPQLHYMVYCRNTGGRYGKATI
EGYYQKLSKAFVELTKQA
SCSGDEYRSLKVDCANGIGALKLREMEHYFSQGLSVQLFNDG
SKGKLNHLCGADFVKSHQKPPQGMEIKSNERCCSFDGDADRIVYYYHDADGHFHLIDGDK
IATLISSFLKELLVEIGESLNIGVVQTAYANGSSTRYLEEVMKVPVYCTKTGVKHLHHKA
QEFDIGVYFEANGHGTALFSTAVEMKIKQSAEQLEDKKRKAAKMLENIIDLFNQAAGDAI
SDMLVIEAILALKGLTVQQWDALYTDLPNRQLKVQVADRRVISTTDAERQAVTPPGLQEA
INDLVKKYKLSRAFVRPSGTEDVVRVYAEADSQESADHLAHEVSLAVF
QLAGGIGERPQP
GF
Sequence length 542
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Amino sugar and nucleotide sugar metabolism
Metabolic pathways
Biosynthesis of nucleotide sugars
  Synthesis of UDP-N-acetyl-glucosamine
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
526
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Hyper-IgE syndrome Pathogenic; Likely pathogenic rs267608260, rs267608261, rs267608259 RCV000144537
RCV000144536
RCV000144535
Immunodeficiency 23 Pathogenic; Likely pathogenic rs1293351659, rs2128497316, rs2128504331, rs565900346, rs777118863, rs587777413, rs587777414, rs587777415, rs587777416, rs267608260, rs267608261, rs1483237450, rs2128509412, rs2128506370, rs587777562
View all (38 more)
RCV001383959
RCV001386408
RCV001383524
RCV003746597
RCV001910246
RCV000119828
RCV000119829
RCV000119830
RCV000119831
RCV000119832
RCV000119833
RCV002005357
RCV002051283
RCV001914469
RCV000128844
RCV000128846
RCV000128847
RCV005867929
RCV002600633
RCV002642361
RCV002847091
RCV003028295
RCV000210409
RCV003779286
RCV003585425
RCV003585541
RCV003584065
RCV003584141
RCV003584191
RCV003746942
RCV003747114
RCV003747184
RCV003747280
RCV003747312
RCV003747292
RCV003747308
RCV003746161
RCV003746204
RCV003746349
RCV003746424
RCV003747535
RCV003747447
RCV003747511
RCV003747475
RCV003747560
RCV003844578
RCV003857340
RCV003876389
RCV003874778
RCV002532696
RCV000613688
RCV000652184
RCV001209728
RCV001232167
PGM3-related disorder Pathogenic rs759187140, rs1404084330 RCV004755013
RCV003900362
Severe combined immunodeficiency disease Likely pathogenic; Pathogenic rs565900346, rs587777562, rs1786839596, rs2538234398, rs764377394, rs759187140, rs144104577 RCV001733378
RCV004700435
RCV002266321
RCV003155837
RCV003487265
RCV004765963
RCV003226337
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Hepatocellular carcinoma Uncertain significance rs755097152 RCV005902103
Malignant tumor of urinary bladder Uncertain significance rs749320607 RCV005912542
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Autoimmune Diseases Associate 24589341
Bone Marrow Failure Disorders Associate 28543917
Colitis Ulcerative Associate 39596612
Colorectal Neoplasms Associate 35723049
Congenital Disorders of Glycosylation Associate 24589341, 24931394, 26482871, 31231132
Demyelinating Diseases Associate 24589341
Desbuquois syndrome Associate 28543917
Developmental Defects of Enamel Associate 26482871
Developmental Disabilities Associate 24698316
Eczema Associate 30157810