Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
5212
Gene name Gene Name - the full gene name approved by the HGNC.
Vitrin
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
VIT
Synonyms (NCBI Gene) Gene synonyms aliases
VIT1
Chromosome Chromosome number
2
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
2p22.2
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes an extracellular matrix (ECM) protein. The protein may be associated with cell adhesion and migration. High levels of expression of the protein in specific parts of the brain suggest its likely role in neural development. [provided by Re
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT022689 hsa-miR-124-3p Microarray 18668037
MIRT1485080 hsa-miR-4663 CLIP-seq
MIRT1485081 hsa-miR-4738-3p CLIP-seq
MIRT1485082 hsa-miR-4797-5p CLIP-seq
MIRT1485083 hsa-miR-628-5p CLIP-seq
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0005539 Function Glycosaminoglycan binding IEA
GO:0005614 Component Interstitial matrix IBA 21873635
GO:0010811 Process Positive regulation of cell-substrate adhesion IBA 21873635
GO:0021510 Process Spinal cord development ISS
GO:0030198 Process Extracellular matrix organization IBA 21873635
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
617693 12697 ENSG00000205221
Protein
UniProt ID Q6UXI7
Protein name Vitrin
Protein function Promotes matrix assembly and cell adhesiveness. Plays a role in spinal cord formation by regulating the proliferation and differentiation of neural stem cells.
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF03815 LCCL 38 133 LCCL domain Domain
PF00092 VWA 293 472 von Willebrand factor type A domain Domain
PF00092 VWA 495 663 von Willebrand factor type A domain Domain
Sequence
Sequence length 678
Interactions View interactions
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Unknown
Disease term Disease name Evidence References Source
Metabolic Syndrome Metabolic Syndrome GWAS
Hypertrophic cardiomyopathy Hypertrophic cardiomyopathy GWAS
Oligodendroglioma Oligodendroglioma GWAS
Leprosy Leprosy GWAS
Associations from Text Mining
Disease Name Relationship Type References
Alveolar capillary dysplasia Associate 38029923
Osteoarthritis Associate 25575966