Gene Gene information from NCBI Gene database.
Entrez ID 51750
Gene name Regulator of telomere elongation helicase 1
Gene symbol RTEL1
Synonyms (NCBI Gene)
C20orf41DKCA4DKCB5NHLPFBMFT3RTEL
Chromosome 20
Chromosome location 20q13.33
Summary This gene encodes a DNA helicase which functions in the stability, protection and elongation of telomeres and interacts with proteins in the shelterin complex known to protect telomeres during DNA replication. Mutations in this gene have been associated w
miRNA miRNA information provided by mirtarbase database.
11
miRTarBase ID miRNA Experiments Reference
MIRT040125 hsa-miR-615-3p CLASH 23622248
MIRT732881 hsa-miR-4530 ImmunofluorescenceLuciferase reporter assayqRT-PCRWestern blotting 33200790
MIRT2319887 hsa-miR-1207-5p CLIP-seq
MIRT2319888 hsa-miR-1285 CLIP-seq
MIRT2319889 hsa-miR-3187-5p CLIP-seq
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
75
GO ID Ontology Definition Evidence Reference
GO:0000018 Process Regulation of DNA recombination IEA
GO:0000166 Function Nucleotide binding IEA
GO:0000723 Process Telomere maintenance IEA
GO:0000723 Process Telomere maintenance IEA
GO:0000723 Process Telomere maintenance IMP 23453664
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
608833 15888 ENSG00000258366
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q9NZ71
Protein name Regulator of telomere elongation helicase 1 (EC 5.6.2.-) (Novel helicase-like)
Protein function A probable ATP-dependent DNA helicase implicated in telomere-length regulation, DNA repair and the maintenance of genomic stability. Acts as an anti-recombinase to counteract toxic recombination and limit crossover during meiosis. Regulates meio
PDB 7WU8 , 8P8H , 8YA8
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF06733 DEAD_2 111 272 DEAD_2 Family
PF13307 Helicase_C_2 545 731 Helicase C-terminal domain Domain
Sequence
MPKIVLNGVTVDFPFQPYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWR
EHLRDGISARKIAERAQGELFPDRALSSWGNAAAAAGDPIACYTDIPKIIYASRTHSQLT
QVINELRNTSYRPKVCVLGSREQLCIHPEVKKQESNHLQIHLCRKKVASRSCHFYNNVEE
KSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADIIFMPYNYLLDAKSRRAHNI
DLKGTVVIFDEAHNVEKMCEESASFDLTPHDL
ASGLDVIDQVLEEQTKAAQQGEPHPEFS
ADSPSPGLNMELEDIAKLKMILLRLEGAIDAVELPGDDSGVTKPGSYIFELFAEAQITFQ
TKGCILDSLDQIIQHLAGRAGVFTNTAGLQKLADIIQIVFSVDPSEGSPGSPAGLGALQS
YKVHIHPDAGHRRTAQRSDAWSTTAARKRGKVLSYWCFSPGHSMHELVRQGVRSLILTSG
TLAPVSSFALEMQIPFPVCLENPHIIDKHQIWVGVVPRGPDGAQLSSAFDRRFSEECLSS
LGKALGNIARVVPYGLLIFFPSYPVMEKSLEFWRARDLARKMEALKPLFVEPRSKGSFSE
TISAYYARVAAPGSTGATFLAVCRGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVVLKM
QFLDEMKGQGGAGGQFLSGQEWYRQQASRAVNQAIGRVIRHRQDYGAVFLCDHRFAFADA
RAQLPSWVRPH
VRVYDNFGHVIRDVAQFFRVAERTMPAPAPRATAPSVRGEDAVSEAKSP
GPFFSTRKAKSLDLHVPSLKQRSSGSPAAGDPESSLCVEYEQEPVPARQRPRGLLAALEH
SEQRAGSPGEEQAHSCSTLSLLSEKRPAEEPRGGRKKIRLVSHPEEPVAGAQTDRAKLFM
VAVKQELSQANFATFTQALQDYKGSDDFAALAACLGPLFAEDPKKHNLLQGFYQFVRPHH
KQQFEEVCIQLTGRGCGYRPEHSIPRRQRAQPVLDPTGRTAPDPKLTVSTAAAQQLDPQE
HLNQGRPHLSPRPPPTGDPGSQPQWGSGVPRAGKQGQHAVSAYLADARRALGSAGCSQLL
AALTAYKQDDDLDKVLAVLAALTTAKPEDFPLLHRFSMFVRPHHKQRFSQTCTDLTGRPY
PGMEPPGPQEERLAVPPVLTHRAPQPGPSRSEKTGKTQSKISSFLRQRPAGTVGAGGEDA
GPSQSSGPPHGPAASEWGL
Sequence length 1219
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    Telomere Extension By Telomerase
Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
6834
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Abnormality of blood and blood-forming tissues Pathogenic rs1415449695 RCV001814212
Action myoclonus-renal failure syndrome Likely pathogenic rs2517017153 RCV003126211
Acute myeloid leukemia Likely pathogenic; Pathogenic rs1555903332 RCV001172446
Adams-Oliver syndrome 3 Likely pathogenic; Pathogenic rs373740199 RCV005862960
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Dyskeratosis congenita, autosomal dominant 1 Uncertain significance; Likely benign; Conflicting classifications of pathogenicity; Benign rs143461704, rs142711955, rs142739953, rs772899702, rs374540895, rs373996455, rs746411863, rs1601119963, rs200565373, rs143248833, rs763882822, rs140629792, rs774564498, rs751146876, rs140564753
View all (12 more)
RCV001273111
RCV001275077
RCV001275085
RCV001275092
RCV001277147
RCV001272187
RCV001275078
RCV001275082
RCV001277146
RCV001272203
RCV001275086
RCV001277128
RCV001275076
RCV001277135
RCV001277141
RCV001272194
RCV001272195
RCV001275084
RCV001275079
RCV001277137
RCV001277144
RCV001275091
RCV001273114
RCV001272202
RCV001277133
RCV001272186
RCV001272204
Dyskeratosis congenita, autosomal recessive 1 Conflicting classifications of pathogenicity rs2090574236 RCV005620404
Immunodeficiency Benign; Likely benign rs41306796 RCV000850293
Microcephaly Uncertain significance rs200933423, rs781481182 RCV001252867
RCV001252848
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Adenocarcinoma Associate 29924316
Adrenocortical Carcinoma Associate 35279598
Alveolitis Extrinsic Allergic Associate 31268371
Anemia Aplastic Associate 29344583
Astrocytoma Associate 21203894, 23812731, 26014354
Atrophy Associate 30823891
Autoimmune Diseases Associate 37328761
Bone Marrow Failure Disorders Associate 23329068, 29344583
Bone Marrow Failure Disorders Inhibit 24561255
Brain Neoplasms Associate 23115063, 26014354, 26839018, 28360516