Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
5154
Gene name Gene Name - the full gene name approved by the HGNC.
Platelet derived growth factor subunit A
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
PDGFA
Synonyms (NCBI Gene) Gene synonyms aliases
PDGF-A, PDGF1
Chromosome Chromosome number
7
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
7p22.3
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a member of the protein family comprised of both platelet-derived growth factors (PDGF) and vascular endothelial growth factors (VEGF). The encoded preproprotein is proteolytically processed to generate platelet-derived growth factor sub
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT005549 hsa-let-7d-5p ELISA, Immunoblot, Microarray, qRT-PCR 21266476
MIRT053724 hsa-miR-221-3p Microarray 22942087
MIRT438915 hsa-miR-29b-3p Luciferase reporter assay, qRT-PCR 23354167
MIRT438915 hsa-miR-29b-3p Luciferase reporter assay, qRT-PCR 23354167
MIRT622855 hsa-miR-7110-3p HITS-CLIP 23824327
Transcription factors
Transcription factor Regulation Reference
FOXF2 Repression 19562724
FOXO1 Unknown 19244250
HOXB7 Activation 21183939
WT1 Repression 1429549;7535092
WT1 Unknown 8415628
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000139 Component Golgi membrane TAS
GO:0000165 Process MAPK cascade TAS
GO:0001525 Process Angiogenesis ISS
GO:0001775 Process Cell activation TAS 10508235
GO:0001942 Process Hair follicle development ISS
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
173430 8799 ENSG00000197461
Protein
UniProt ID P04085
Protein name Platelet-derived growth factor subunit A (PDGF subunit A) (PDGF-1) (Platelet-derived growth factor A chain) (Platelet-derived growth factor alpha polypeptide)
Protein function Growth factor that plays an essential role in the regulation of embryonic development, cell proliferation, cell migration, survival and chemotaxis. Potent mitogen for cells of mesenchymal origin. Required for normal lung alveolar septum formatio
PDB 3MJK
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF04692 PDGF_N 21 95 Platelet-derived growth factor, N terminal region Family
PF00341 PDGF 96 179 PDGF/VEGF domain Domain
Sequence
Sequence length 211
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  EGFR tyrosine kinase inhibitor resistance
MAPK signaling pathway
Ras signaling pathway
Rap1 signaling pathway
Calcium signaling pathway
Phospholipase D signaling pathway
PI3K-Akt signaling pathway
Focal adhesion
Gap junction
JAK-STAT signaling pathway
Regulation of actin cytoskeleton
Pathways in cancer
Transcriptional misregulation in cancer
MicroRNAs in cancer
Glioma
Prostate cancer
Melanoma
Choline metabolism in cancer
Fluid shear stress and atherosclerosis
  Platelet degranulation
PIP3 activates AKT signaling
Downstream signal transduction
Signaling by PDGF
Constitutive Signaling by Aberrant PI3K in Cancer
Non-integrin membrane-ECM interactions
RAF/MAP kinase cascade
PI5P, PP2A and IER3 Regulate PI3K/AKT Signaling
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Amyotrophic lateral sclerosis Amyotrophic Lateral Sclerosis, Familial rs267607084, rs312262720, rs312262752, rs121908287, rs121908288, rs29001584, rs28941475, rs121434378, rs386134173, rs386134174, rs80356730, rs80356727, rs4884357, rs80356717, rs80356733
View all (171 more)
11796754
Breast cancer Malignant neoplasm of breast rs587776547, rs1137887, rs137853007, rs587776650, rs80359351, rs80359714, rs121917783, rs104886456, rs121964878, rs80359874, rs80357868, rs80357508, rs387906843, rs80357569, rs80358158
View all (309 more)
16298037
Breast carcinoma Breast Carcinoma rs80359671, rs11540652, rs28934575, rs28897672, rs137886232, rs193922376, rs80357783, rs80359306, rs80359405, rs80359507, rs80359598, rs80358429, rs397507683, rs397515636, rs80359451
View all (71 more)
16298037
Carcinoma Carcinoma, Carcinoma, Spindle-Cell, Undifferentiated carcinoma rs121912654, rs555607708, rs786202962, rs1564055259 12376462, 16316942
Unknown
Disease term Disease name Evidence References Source
Atrioventricular block Atrioventricular block GWAS
Associations from Text Mining
Disease Name Relationship Type References
Acute Coronary Syndrome Associate 34151742
Adenoma Pleomorphic Associate 20379686
Aortic Aneurysm Abdominal Stimulate 29439675
Aortic Aneurysm Thoracic Stimulate 35563123
Astrocytoma Associate 2164040
Atherosclerosis Associate 8579107
Atrial Fibrillation Associate 26774166
Biliary Atresia Associate 32662506, 40665430
Binge Drinking Associate 30038270
Breast Neoplasms Associate 39302921