Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
51524
Gene name Gene Name - the full gene name approved by the HGNC.
Transmembrane protein 138
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
TMEM138
Synonyms (NCBI Gene) Gene synonyms aliases
HSPC196
Chromosome Chromosome number
11
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
11q12.2
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a multi-pass transmembrane protein. Reduced expression of this gene in mouse fibroblasts causes short cilia and failure of ciliogenesis. Expression of this gene is tightly coordinated with expression of the neighboring gene TMEM216. Muta
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs387907132 A>G Pathogenic, likely-pathogenic Missense variant, coding sequence variant, non coding transcript variant
rs387907133 C>T Pathogenic Missense variant, 3 prime UTR variant, non coding transcript variant, coding sequence variant, intron variant
rs387907134 G>A Pathogenic Missense variant, coding sequence variant, intron variant, non coding transcript variant
rs886039804 A>G Likely-pathogenic Missense variant, non coding transcript variant, coding sequence variant, 5 prime UTR variant
rs917404097 G>A Pathogenic Intron variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT019560 hsa-miR-340-5p Sequencing 20371350
MIRT267395 hsa-miR-6873-5p PAR-CLIP 21572407
MIRT267385 hsa-miR-1321 PAR-CLIP 21572407
MIRT267389 hsa-miR-4739 PAR-CLIP 21572407
MIRT267390 hsa-miR-4756-5p PAR-CLIP 21572407
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0005774 Component Vacuolar membrane IEA
GO:0005929 Component Cilium IBA 21873635
GO:0005929 Component Cilium IDA 22282472
GO:0016021 Component Integral component of membrane IEA
GO:0060271 Process Cilium assembly IMP 22282472
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
614459 26944 ENSG00000149483
Protein
UniProt ID Q9NPI0
Protein name Transmembrane protein 138
Protein function Required for ciliogenesis.
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF14935 TMEM138 38 156 Transmembrane protein 138 Family
Sequence
Sequence length 162
Interactions View interactions
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Autism Autistic behavior rs121964908, rs62643608, rs181327458, rs797046134, rs869312704, rs1555013332, rs876657679, rs1057518999, rs1057518658, rs771827120, rs1555187899, rs773080572, rs753871454, rs1684130791, rs1684180699
View all (8 more)
Cerebellar vermis agenesis Familial aplasia of the vermis rs201108965, rs13297509, rs121918129, rs121918130, rs121918197, rs121918198, rs121918199, rs121918203, rs121918204, rs145665129, rs121434348, rs121434349, rs267606641, rs201391050, rs387907003
View all (121 more)
22282472
Congenital ocular coloboma Congenital ocular coloboma (disorder) rs587778875, rs587777249, rs767611891, rs2091986259, rs2091987023, rs2091988799
Developmental delay Global developmental delay rs28941770, rs199469464, rs281865469, rs143747297, rs398123009, rs587777428, rs786205133, rs606231459, rs797044854, rs797045027, rs864309504, rs878853160, rs886039902, rs886042046, rs886041291
View all (32 more)
Unknown
Disease term Disease name Evidence References Source
Ptosis Blepharoptosis, Ptosis ClinVar
Joubert Syndrome With Oculorenal Defect Joubert syndrome with oculorenal defect GenCC
Joubert Syndrome Joubert syndrome 16 GenCC
Associations from Text Mining
Disease Name Relationship Type References
Ciliopathies Associate 34354814, 35394880
Nerve Degeneration Associate 35394880