Gene Gene information from NCBI Gene database.
Entrez ID 51284
Gene name Toll like receptor 7
Gene symbol TLR7
Synonyms (NCBI Gene)
IMD74SLEB17TLR7-like
Chromosome X
Chromosome location Xp22.2
Summary The protein encoded by this gene is a member of the Toll-like receptor (TLR) family which plays a fundamental role in pathogen recognition and activation of innate immunity. TLRs are highly conserved from Drosophila to humans and share structural and func
miRNA miRNA information provided by mirtarbase database.
298
miRTarBase ID miRNA Experiments Reference
MIRT438602 hsa-miR-758-3p Luciferase reporter assayWestern blotqRT-PCR 25008898
MIRT438602 hsa-miR-758-3p Luciferase reporter assayWestern blotqRT-PCR 25008898
MIRT684099 hsa-miR-106a-5p HITS-CLIP 23313552
MIRT684098 hsa-miR-106b-5p HITS-CLIP 23313552
MIRT684097 hsa-miR-17-5p HITS-CLIP 23313552
Transcription factors Transcription factors information provided by TRRUST V2 database.
2
Transcription factor Regulation Reference
NFKB1 Activation 16423052;20658750
RELA Activation 16423052;20658750
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
70
GO ID Ontology Definition Evidence Reference
GO:0000139 Component Golgi membrane TAS
GO:0000165 Process MAPK cascade IEA
GO:0002224 Process Toll-like receptor signaling pathway IBA
GO:0002376 Process Immune system process IEA
GO:0003725 Function Double-stranded RNA binding IDA 16111635
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
300365 15631 ENSG00000196664
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q9NYK1
Protein name Toll-like receptor 7
Protein function Endosomal receptor that plays a key role in innate and adaptive immunity (PubMed:14976261, PubMed:32433612). Controls host immune response against pathogens through recognition of uridine-containing single strand RNAs (ssRNAs) of viral origin or
PDB 7CYN
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF13855 LRR_8 496 554 Leucine rich repeat Repeat
PF00560 LRR_1 700 743 Leucine Rich Repeat Repeat
PF01582 TIR 890 1048 TIR domain Family
Tissue specificity TISSUE SPECIFICITY: Detected in brain, placenta, spleen, stomach, small intestine, lung and in plasmacytoid pre-dendritic cells. Expressed in peripheral mononuclear blood cells (PubMed:32706371). {ECO:0000269|PubMed:32706371}.
Sequence
MVFPMWTLKRQILILFNIILISKLLGARWFPKTLPCDVTLDVPKNHVIVDCTDKHLTEIP
GGIPTNTTNLTLTINHIPDISPASFHRLDHLVEIDFRCNCVPIPLGSKNNMCIKRLQIKP
RSFSGLTYLKSLYLDGNQLLEIPQGLPPSLQLLSLEANNIFSIRKENLTELANIEILYLG
QNCYYRNPCYVSYSIEKDAFLNLTKLKVLSLKDNNVTAVPTVLPSTLTELYLYNNMIAKI
QEDDFNNLNQLQILDLSGNCPRCYNAPFPCAPCKNNSPLQIPVNAFDALTELKVLRLHSN
SLQHVPPRWFKNINKLQELDLSQNFLAKEIGDAKFLHFLPSLIQLDLSFNFELQVYRASM
NLSQAFSSLKSLKILRIRGYVFKELKSFNLSPLHNLQNLEVLDLGTNFIKIANLSMFKQF
KRLKVIDLSVNKISPSGDSSEVGFCSNARTSVESYEPQVLEQLHYFRYDKYARSCRFKNK
EASFMSVNESCYKYGQTLDLSKNSIFFVKSSDFQHLSFLKCLNLSGNLISQTLNGSEFQP
LAELRYLDFSNNRL
DLLHSTAFEELHKLEVLDISSNSHYFQSEGITHMLNFTKNLKVLQK
LMMNDNDISSSTSRTMESESLRTLEFRGNHLDVLWREGDNRYLQLFKNLLKLEELDISKN
SLSFLPSGVFDGMPPNLKNLSLAKNGLKSFSWKKLQCLKNLETLDLSHNQLTTVPERLSN
CSRSLKNLILKNNQIRSLTKYFL
QDAFQLRYLDLSSNKIQMIQKTSFPENVLNNLKMLLL
HHNRFLCTCDAVWFVWWVNHTEVTIPYLATDVTCVGPGAHKGQSVISLDLYTCELDLTNL
ILFSLSISVSLFLMVMMTASHLYFWDVWYIYHFCKAKIKGYQRLISPDCCYDAFIVYDTK
DPAVTEWVLAELVAKLEDPREKHFNLCLEERDWLPGQPVLENLSQSIQLSKKTVFVMTDK
YAKTENFKIAFYLSHQRLMDEKVDVIILIFLEKPFQKSKFLQLRKRLCGSSVLEWPTNPQ
AHPYFWQCLKNALATDNHVAYSQVFKET
V
Sequence length 1049
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Neutrophil extracellular trap formation
Toll-like receptor signaling pathway
Measles
Influenza A
Coronavirus disease - COVID-19
  Trafficking and processing of endosomal TLR
Toll Like Receptor 7/8 (TLR7/8) Cascade
TRAF6 mediated IRF7 activation in TLR7/8 or 9 signaling
TRAF6 mediated induction of NFkB and MAP kinases upon TLR7/8 or 9 activation
MyD88 dependent cascade initiated on endosome
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
26
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Immunodeficiency 74, COVID-19-related, X-linked Pathogenic rs2042915990, rs200553089 RCV001254821
RCV001254822
Systemic lupus erythematosus Pathogenic rs2147245859 RCV002259554
Systemic lupus erythematosus 17 Pathogenic rs2147245859, rs2147245261 RCV002251771
RCV002248405
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Acute myeloid leukemia Benign rs5743780 RCV005926344
Cervical cancer Benign rs5743780 RCV005926345
Clear cell carcinoma of kidney Benign rs5743780 RCV005926346
Gastric cancer Benign rs5743780 RCV005926348
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Acute Kidney Injury Associate 31531603
Adenocarcinoma of Lung Associate 37746997
Agnosia Associate 28856441
Aicardi Syndrome Associate 26888781
Anemia Hemolytic Autoimmune Associate 34981838
Antiphospholipid Syndrome Associate 30864219
Aortic Valve Stenosis Associate 32708790
Appendicitis Associate 24336024
Arthritis Associate 35508687
Arthritis Juvenile Associate 28935693