Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
51105
Gene name Gene Name - the full gene name approved by the HGNC.
PHD finger protein 20 like 1
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
PHF20L1
Synonyms (NCBI Gene) Gene synonyms aliases
CGI-72, TDRD20B, URLC1
Chromosome Chromosome number
8
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
8q24.22
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT020043 hsa-miR-375 Microarray 20215506
MIRT031038 hsa-miR-21-5p Microarray 18591254
MIRT039060 hsa-miR-769-3p CLASH 23622248
MIRT655168 hsa-miR-212-3p HITS-CLIP 23824327
MIRT655167 hsa-miR-132-3p HITS-CLIP 23824327
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0005515 Function Protein binding IPI 16415788
GO:0006357 Process Regulation of transcription by RNA polymerase II IBA 21873635
GO:0016573 Process Histone acetylation IBA 21873635
GO:0044545 Component NSL complex IBA 21873635
GO:0046872 Function Metal ion binding IEA
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
620050 24280 ENSG00000129292
Protein
UniProt ID A8MW92
Protein name PHD finger protein 20-like protein 1
Protein function Is a negative regulator of proteasomal degradation of a set of methylated proteins, including DNMT1 and SOX2 (PubMed:24492612, PubMed:29358331). Involved in the maintainance of embryonic stem cells pluripotency, through the regulation of SOX2 le
PDB 2EQM , 2EQU , 2JTF , 6L0X , 6L10 , 6L1C , 6L1F , 6L1I , 6L1P
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF02820 MBT 18 69 mbt repeat Domain
PF18104 Tudor_2 90 123 Jumonji domain-containing protein 2A Tudor domain Domain
PF12618 DUF3776 211 319 Protein of unknown function (DUF3776) Family
PF16660 PHD20L1_u1 318 414 Disordered
Sequence
MSKKPPNRPGITFEIGARLEALDYLQKWYPSRIEKIDYEEGKMLVHFERWSHRYDEWIYW
DSNRLRPLE
RPALRKEGLKDEEDFFDFKAGEEVLARWTDCRYYPAKIEAINKEGTFTVQF
YDG
VIRCLKRMHIKAMPEDAKGQVKSQHPLSWCCPIDPAGSCNQSMGSEDWIALVKAAAA
AAAKNKTGSKPRTSANSNKDKDKDERKWFKVPSKKEETSTCIATPDVEKKEDLPTSSETF
GLHVENVPKMVFPQPESTLSNKRKNNQGNSFQAKRARLNKITGLLASKAVGVDGAEKKED
YNETAPMLEQAISPKPQ
SQKKNEADISSSANTQKPALLSSTLSSGKARSKKCKHESGDSS
GCIKPPKSPLSPELIQVEDLTLVSQLSSSVINKTSPPQPVNPPRPFKHSERRRR
SQRLAT
LPMPDDSVEKVSSPSPATDGKVFSISSQNQQESSVPEVPDVAHLPLEKLGPCLPLDLSRG
SEVTAPVASDSSYRNECPRAEKEDTQMLPNPSSKAIADGRGAPAAAGISKTEKKVKLEDK
SSTAFGKRKEKDKERREKRDKDHYRPKQKKKKKKKKKSKQHDYSDYEDSSLEFLERCSSP
LTRSSGSSLASRSMFTEKTTTYQYPRAILSVDLSGENLSDVDFLDDSSTESLLLSGDEYN
QDFDSTNFEESQDEDDALNEIVRCICEMDEENGFMIQCEECLCWQHSVCMGLLEESIPEQ
YICYICRDPPGQRWSAKYRYDKEWLNNGRMCGLSFFKENYSHLNAKKIVSTHHLLADVYG
VTEVLHGLQLKIGILKNKHHPDLHLWACSGKRKDQDQIIAGVEKKIAQDTVNREEKKYVQ
NHKEPPRLPLKMEGTYITSEHSYQKPQSFGQDCKSLADPGSSDDDDVSSLEEEQEFHMRS
KNSLQYSAKEHGMPEKNPAEGNTVFVYNDKKGTEDPGDSHLQWQLNLLTHIENVQNEVTS
RMDLIEKEVDVLESWLDFTGELEPPDPLARLPQLKRHIKQLLIDMGKVQQIATLCSV
Sequence length 1017
Interactions View interactions