Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene information from NCBI Gene database. Gene miRNA Gene ontology Other IDs Protein Pathways
Entrez ID	51023
Gene name	Mitochondrial ribosomal protein S18C
Gene symbol	MRPS18C
Synonyms (NCBI Gene)	CGI-134MRP-S18-1MRP-S18-cMRPS18-1S18mt-cbS18mmrps18-c
Chromosome	4
Chromosome location	4q21.23
Summary	Mammalian mitochondrial ribosomal proteins are encoded by nuclear genes and help in protein synthesis within the mitochondrion. Mitochondrial ribosomes (mitoribosomes) consist of a small 28S subunit and a large 39S subunit. They have an estimated 75% prot

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miRTarBase ID	miRNA	Experiments	Reference
MIRT620664	hsa-miR-5096	HITS-CLIP	23824327
MIRT620663	hsa-miR-335-3p	HITS-CLIP	23824327
MIRT620662	hsa-miR-513a-3p	HITS-CLIP	23824327
MIRT620661	hsa-miR-513c-3p	HITS-CLIP	23824327
MIRT620664	hsa-miR-5096	HITS-CLIP	23824327
MIRT620663	hsa-miR-335-3p	HITS-CLIP	23824327
MIRT620662	hsa-miR-513a-3p	HITS-CLIP	23824327
MIRT620661	hsa-miR-513c-3p	HITS-CLIP	23824327
MIRT620664	hsa-miR-5096	HITS-CLIP	23824327
MIRT620663	hsa-miR-335-3p	HITS-CLIP	23824327
MIRT620662	hsa-miR-513a-3p	HITS-CLIP	23824327
MIRT620661	hsa-miR-513c-3p	HITS-CLIP	23824327
MIRT620666	hsa-miR-495-5p	HITS-CLIP	23824327
MIRT620665	hsa-miR-382-5p	HITS-CLIP	23824327
MIRT620664	hsa-miR-5096	HITS-CLIP	23824327
MIRT620663	hsa-miR-335-3p	HITS-CLIP	23824327
MIRT620662	hsa-miR-513a-3p	HITS-CLIP	23824327
MIRT620661	hsa-miR-513c-3p	HITS-CLIP	23824327
MIRT620664	hsa-miR-5096	HITS-CLIP	23824327
MIRT620663	hsa-miR-335-3p	HITS-CLIP	23824327
MIRT620662	hsa-miR-513a-3p	HITS-CLIP	23824327
MIRT620661	hsa-miR-513c-3p	HITS-CLIP	23824327
MIRT620664	hsa-miR-5096	HITS-CLIP	23824327
MIRT620663	hsa-miR-335-3p	HITS-CLIP	23824327
MIRT620662	hsa-miR-513a-3p	HITS-CLIP	23824327
MIRT620661	hsa-miR-513c-3p	HITS-CLIP	23824327
MIRT620664	hsa-miR-5096	HITS-CLIP	23824327
MIRT620663	hsa-miR-335-3p	HITS-CLIP	23824327
MIRT620662	hsa-miR-513a-3p	HITS-CLIP	23824327
MIRT620661	hsa-miR-513c-3p	HITS-CLIP	23824327
MIRT620666	hsa-miR-495-5p	HITS-CLIP	23824327
MIRT620665	hsa-miR-382-5p	HITS-CLIP	23824327
MIRT620664	hsa-miR-5096	HITS-CLIP	23824327
MIRT620663	hsa-miR-335-3p	HITS-CLIP	23824327
MIRT620662	hsa-miR-513a-3p	HITS-CLIP	23824327
MIRT620661	hsa-miR-513c-3p	HITS-CLIP	23824327
MIRT1159950	hsa-miR-3143	CLIP-seq
MIRT1159951	hsa-miR-4328	CLIP-seq
MIRT1159952	hsa-miR-4539	CLIP-seq
MIRT1159953	hsa-miR-4686	CLIP-seq
MIRT1159954	hsa-miR-4720-3p	CLIP-seq
MIRT1159955	hsa-miR-4804-3p	CLIP-seq
MIRT1159956	hsa-miR-543	CLIP-seq
MIRT2275004	hsa-miR-1237	CLIP-seq
MIRT2275005	hsa-miR-1248	CLIP-seq
MIRT2275006	hsa-miR-2277-3p	CLIP-seq
MIRT2275007	hsa-miR-2355-3p	CLIP-seq
MIRT2275008	hsa-miR-29a	CLIP-seq
MIRT2275009	hsa-miR-29b	CLIP-seq
MIRT2275010	hsa-miR-29c	CLIP-seq
MIRT2275011	hsa-miR-3065-3p	CLIP-seq
MIRT2275012	hsa-miR-3182	CLIP-seq
MIRT2275013	hsa-miR-371-5p	CLIP-seq
MIRT2275014	hsa-miR-4504	CLIP-seq
MIRT2275015	hsa-miR-4646-3p	CLIP-seq
MIRT2275016	hsa-miR-4677-3p	CLIP-seq
MIRT2275017	hsa-miR-4679	CLIP-seq
MIRT2275018	hsa-miR-483-3p	CLIP-seq
MIRT2275019	hsa-miR-542-3p	CLIP-seq
MIRT2275020	hsa-miR-676	CLIP-seq
MIRT2573982	hsa-miR-1236	CLIP-seq
MIRT2573983	hsa-miR-1279	CLIP-seq
MIRT2573984	hsa-miR-297	CLIP-seq
MIRT2573985	hsa-miR-4272	CLIP-seq
MIRT2573986	hsa-miR-4495	CLIP-seq
MIRT2573987	hsa-miR-4666-5p	CLIP-seq
MIRT2573988	hsa-miR-4796-5p	CLIP-seq
MIRT2573989	hsa-miR-487a	CLIP-seq
MIRT2573990	hsa-miR-567	CLIP-seq
MIRT2573991	hsa-miR-654-3p	CLIP-seq
MIRT2573982	hsa-miR-1236	CLIP-seq
MIRT2573983	hsa-miR-1279	CLIP-seq
MIRT2573984	hsa-miR-297	CLIP-seq
MIRT2573985	hsa-miR-4272	CLIP-seq
MIRT2573986	hsa-miR-4495	CLIP-seq
MIRT2573987	hsa-miR-4666-5p	CLIP-seq
MIRT2573988	hsa-miR-4796-5p	CLIP-seq
MIRT2573989	hsa-miR-487a	CLIP-seq
MIRT2573990	hsa-miR-567	CLIP-seq
MIRT2573991	hsa-miR-654-3p	CLIP-seq

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GO ID	Ontology	Definition	Evidence	Reference
GO:0003735	Function	Structural constituent of ribosome	IBA
GO:0003735	Function	Structural constituent of ribosome	IEA
GO:0003735	Function	Structural constituent of ribosome	NAS	11279123
GO:0005739	Component	Mitochondrion	HTP	34800366
GO:0005739	Component	Mitochondrion	IEA
GO:0005743	Component	Mitochondrial inner membrane	IEA
GO:0005743	Component	Mitochondrial inner membrane	NAS	27023846
GO:0005743	Component	Mitochondrial inner membrane	TAS
GO:0005763	Component	Mitochondrial small ribosomal subunit	IBA
GO:0005763	Component	Mitochondrial small ribosomal subunit	IDA	11279123, 25838379
GO:0005763	Component	Mitochondrial small ribosomal subunit	IEA
GO:0005763	Component	Mitochondrial small ribosomal subunit	NAS	25838379
GO:0005840	Component	Ribosome	IEA
GO:0006412	Process	Translation	IBA
GO:0006412	Process	Translation	IEA
GO:0006412	Process	Translation	NAS	11279123
GO:0032543	Process	Mitochondrial translation	NAS	27023846
GO:0070181	Function	Small ribosomal subunit rRNA binding	IBA
GO:1990904	Component	Ribonucleoprotein complex	IEA

MIM	HGNC	e!Ensembl
611983	16633	ENSG00000163319

Q9Y3D5

Protein name

Small ribosomal subunit protein bS18m (28S ribosomal protein S18-1, mitochondrial) (MRP-S18-1) (28S ribosomal protein S18c, mitochondrial) (MRP-S18-c) (Mrps18-c) (S18mt-c) (Small ribosomal subunit protein bS18c)

PDB

3J9M , 6NU2 , 6NU3 , 6RW4 , 6RW5 , 6VLZ , 6VMI , 6ZM5 , 6ZM6 , 6ZS9 , 6ZSA , 6ZSB , 6ZSC , 6ZSD , 6ZSE , 6ZSG , 7A5F , 7A5G , 7A5I , 7A5K , 7L08 , 7OG4 , 7P2E , 7PNX , 7PNY , 7PNZ , 7PO0 , 7PO1 , 7PO2 , 7PO3 , 7QI4 , 7QI5 , 7QI6 , 8ANY , 8CSP , 8CSQ , 8CSR , 8CSS , 8CST , 8CSU , 8K2A , 8OIR , 8OIS , 8QRK , 8QRL , 8QRM , 8QRN , 8RRI , 8XT0 , 8XT2

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF01084	Ribosomal_S18	69 → 120	Ribosomal protein S18	Family

Sequence

MAAVVAVCGGLGRKKLTHLVTAAVSLTHPGTHTVLWRRGCSQQVSSNEDLPISMENPYKE
PLKKCILCGKHVDYKNVQLLSQFVSPFTGCIYGRHITGLCGKKQKEITKAIKRAQIMGFM
PVTYKDPAYLKDPKVCNIRYRE

Sequence length

142

Interactions

View interactions

	KEGG		Reactome
	Ribosome		Mitochondrial translation elongation Mitochondrial translation termination

MRPS18C (mitochondrial ribosomal protein S18C)