Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene information from NCBI Gene database. Gene SNPs miRNA Gene ontology Other IDs Protein Associated diseases
Entrez ID	50939
Gene name	Interphotoreceptor matrix proteoglycan 2
Gene symbol	IMPG2
Synonyms (NCBI Gene)	IPM200RP56SPACRCANVMD5
Chromosome	3
Chromosome location	3q12.3
Summary	The protein encoded by this gene binds chondroitin sulfate and hyaluronan and is a proteoglycan. The encoded protein plays a role in the organization of the interphotoreceptor matrix and may promote the growth and maintenance of the light-sensitive photor

Show/Hide all (29)

SNP ID	Visualize variation	Clinical significance	Consequence
rs116450347	G>A	Conflicting-interpretations-of-pathogenicity, likely-benign, uncertain-significance	Missense variant, coding sequence variant
rs199867882	G>A	Pathogenic, likely-pathogenic	Coding sequence variant, stop gained
rs201893545	A>G	Pathogenic, likely-pathogenic	Coding sequence variant, missense variant
rs267606874	G>C	Pathogenic	Coding sequence variant, stop gained
rs267606875	G>A	Pathogenic, likely-pathogenic	Coding sequence variant, stop gained
rs267606876	G>A	Pathogenic	Coding sequence variant, stop gained
rs371805004	G>A	Conflicting-interpretations-of-pathogenicity	Coding sequence variant, synonymous variant
rs567795716	A>-,AA	Uncertain-significance, conflicting-interpretations-of-pathogenicity	Intron variant
rs713993049	C>A	Pathogenic	Missense variant, coding sequence variant
rs749723076	C>T	Likely-pathogenic	Coding sequence variant, missense variant
rs754995805	->TTCATCACCTAAAA	Likely-pathogenic	Splice acceptor variant, coding sequence variant, intron variant
rs758291149	A>G,T	Pathogenic	Stop gained, synonymous variant, coding sequence variant
rs763295314	A>C	Likely-pathogenic, pathogenic	Stop gained, coding sequence variant
rs766305807	C>G,T	Likely-pathogenic	Coding sequence variant, missense variant
rs768660614	->T	Likely-pathogenic	Coding sequence variant, frameshift variant
rs770339774	G>-	Likely-pathogenic	Coding sequence variant, frameshift variant
rs776740276	C>A	Pathogenic	Splice acceptor variant
rs786205564	C>T	Pathogenic, likely-pathogenic	Stop gained, coding sequence variant
rs786205565	G>C	Likely-pathogenic	Missense variant, coding sequence variant
rs878853357	C>A	Likely-pathogenic	Stop gained, coding sequence variant
rs878853358	AC>-	Likely-pathogenic	Frameshift variant, coding sequence variant
rs1276845142	T>A	Likely-pathogenic	Stop gained, coding sequence variant
rs1409688898	G>C	Likely-pathogenic	Coding sequence variant, stop gained
rs1553681348	C>T	Likely-pathogenic	Stop gained, coding sequence variant
rs1553681433	A>-	Pathogenic	Frameshift variant, coding sequence variant
rs1553681434	->C	Pathogenic	Frameshift variant, coding sequence variant
rs1553687058	C>A	Likely-pathogenic	Stop gained, coding sequence variant
rs1553687118	A>T	Pathogenic	Splice donor variant
rs1559642470	A>T	Likely-pathogenic	Missense variant, coding sequence variant

418

Show/Hide all (418)

miRTarBase ID	miRNA	Experiments	Reference
MIRT504928	hsa-miR-5011-5p	HITS-CLIP	21572407
MIRT504927	hsa-miR-586	HITS-CLIP	21572407
MIRT504926	hsa-miR-190a-3p	HITS-CLIP	21572407
MIRT504925	hsa-miR-1277-5p	HITS-CLIP	21572407
MIRT504928	hsa-miR-5011-5p	HITS-CLIP	23313552
MIRT504927	hsa-miR-586	HITS-CLIP	23313552
MIRT504926	hsa-miR-190a-3p	HITS-CLIP	23313552
MIRT504925	hsa-miR-1277-5p	HITS-CLIP	23313552
MIRT504928	hsa-miR-5011-5p	HITS-CLIP	23313552
MIRT504927	hsa-miR-586	HITS-CLIP	23313552
MIRT675898	hsa-miR-5196-3p	HITS-CLIP	23313552
MIRT675897	hsa-miR-4793-5p	HITS-CLIP	23313552
MIRT504926	hsa-miR-190a-3p	HITS-CLIP	23313552
MIRT504925	hsa-miR-1277-5p	HITS-CLIP	23313552
MIRT504928	hsa-miR-5011-5p	HITS-CLIP	23824327
MIRT504927	hsa-miR-586	HITS-CLIP	23824327
MIRT675898	hsa-miR-5196-3p	HITS-CLIP	23824327
MIRT675897	hsa-miR-4793-5p	HITS-CLIP	23824327
MIRT504926	hsa-miR-190a-3p	HITS-CLIP	23824327
MIRT504925	hsa-miR-1277-5p	HITS-CLIP	23824327
MIRT504928	hsa-miR-5011-5p	PAR-CLIP	20371350
MIRT504927	hsa-miR-586	PAR-CLIP	20371350
MIRT504926	hsa-miR-190a-3p	PAR-CLIP	20371350
MIRT504925	hsa-miR-1277-5p	PAR-CLIP	20371350
MIRT504928	hsa-miR-5011-5p	PAR-CLIP	21572407
MIRT504927	hsa-miR-586	PAR-CLIP	21572407
MIRT504926	hsa-miR-190a-3p	PAR-CLIP	21572407
MIRT522994	hsa-miR-6083	PAR-CLIP	21572407
MIRT504925	hsa-miR-1277-5p	PAR-CLIP	21572407
MIRT504928	hsa-miR-5011-5p	PAR-CLIP	21572407
MIRT504927	hsa-miR-586	PAR-CLIP	21572407
MIRT504926	hsa-miR-190a-3p	PAR-CLIP	21572407
MIRT504925	hsa-miR-1277-5p	PAR-CLIP	21572407
MIRT504928	hsa-miR-5011-5p	PAR-CLIP	23446348
MIRT504927	hsa-miR-586	PAR-CLIP	23446348
MIRT504926	hsa-miR-190a-3p	PAR-CLIP	23446348
MIRT522995	hsa-miR-4799-5p	PAR-CLIP	23446348
MIRT522994	hsa-miR-6083	PAR-CLIP	23446348
MIRT504925	hsa-miR-1277-5p	PAR-CLIP	23446348
MIRT504928	hsa-miR-5011-5p	PAR-CLIP	23446348
MIRT504927	hsa-miR-586	PAR-CLIP	23446348
MIRT504926	hsa-miR-190a-3p	PAR-CLIP	23446348
MIRT504925	hsa-miR-1277-5p	PAR-CLIP	23446348
MIRT504928	hsa-miR-5011-5p	PAR-CLIP	23446348
MIRT504927	hsa-miR-586	PAR-CLIP	23446348
MIRT504926	hsa-miR-190a-3p	PAR-CLIP	23446348
MIRT504925	hsa-miR-1277-5p	PAR-CLIP	23446348
MIRT504928	hsa-miR-5011-5p	PAR-CLIP	23446348
MIRT504927	hsa-miR-586	PAR-CLIP	23446348
MIRT504926	hsa-miR-190a-3p	PAR-CLIP	23446348
MIRT504925	hsa-miR-1277-5p	PAR-CLIP	23446348
MIRT504928	hsa-miR-5011-5p	HITS-CLIP	21572407
MIRT504927	hsa-miR-586	HITS-CLIP	21572407
MIRT504926	hsa-miR-190a-3p	HITS-CLIP	21572407
MIRT504925	hsa-miR-1277-5p	HITS-CLIP	21572407
MIRT504928	hsa-miR-5011-5p	HITS-CLIP	23313552
MIRT504927	hsa-miR-586	HITS-CLIP	23313552
MIRT504926	hsa-miR-190a-3p	HITS-CLIP	23313552
MIRT504925	hsa-miR-1277-5p	HITS-CLIP	23313552
MIRT504928	hsa-miR-5011-5p	HITS-CLIP	23313552
MIRT504927	hsa-miR-586	HITS-CLIP	23313552
MIRT675898	hsa-miR-5196-3p	HITS-CLIP	23313552
MIRT675897	hsa-miR-4793-5p	HITS-CLIP	23313552
MIRT504926	hsa-miR-190a-3p	HITS-CLIP	23313552
MIRT504925	hsa-miR-1277-5p	HITS-CLIP	23313552
MIRT504928	hsa-miR-5011-5p	HITS-CLIP	23824327
MIRT504927	hsa-miR-586	HITS-CLIP	23824327
MIRT675898	hsa-miR-5196-3p	HITS-CLIP	23824327
MIRT675897	hsa-miR-4793-5p	HITS-CLIP	23824327
MIRT504926	hsa-miR-190a-3p	HITS-CLIP	23824327
MIRT504925	hsa-miR-1277-5p	HITS-CLIP	23824327
MIRT504928	hsa-miR-5011-5p	PAR-CLIP	20371350
MIRT504927	hsa-miR-586	PAR-CLIP	20371350
MIRT504926	hsa-miR-190a-3p	PAR-CLIP	20371350
MIRT504925	hsa-miR-1277-5p	PAR-CLIP	20371350
MIRT504928	hsa-miR-5011-5p	PAR-CLIP	21572407
MIRT504927	hsa-miR-586	PAR-CLIP	21572407
MIRT504926	hsa-miR-190a-3p	PAR-CLIP	21572407
MIRT522994	hsa-miR-6083	PAR-CLIP	21572407
MIRT504925	hsa-miR-1277-5p	PAR-CLIP	21572407
MIRT504928	hsa-miR-5011-5p	PAR-CLIP	21572407
MIRT504927	hsa-miR-586	PAR-CLIP	21572407
MIRT504926	hsa-miR-190a-3p	PAR-CLIP	21572407
MIRT504925	hsa-miR-1277-5p	PAR-CLIP	21572407
MIRT504928	hsa-miR-5011-5p	PAR-CLIP	23446348
MIRT504927	hsa-miR-586	PAR-CLIP	23446348
MIRT504926	hsa-miR-190a-3p	PAR-CLIP	23446348
MIRT522995	hsa-miR-4799-5p	PAR-CLIP	23446348
MIRT522994	hsa-miR-6083	PAR-CLIP	23446348
MIRT504925	hsa-miR-1277-5p	PAR-CLIP	23446348
MIRT504928	hsa-miR-5011-5p	PAR-CLIP	23446348
MIRT504927	hsa-miR-586	PAR-CLIP	23446348
MIRT504926	hsa-miR-190a-3p	PAR-CLIP	23446348
MIRT504925	hsa-miR-1277-5p	PAR-CLIP	23446348
MIRT504928	hsa-miR-5011-5p	PAR-CLIP	23446348
MIRT504927	hsa-miR-586	PAR-CLIP	23446348
MIRT504926	hsa-miR-190a-3p	PAR-CLIP	23446348
MIRT504925	hsa-miR-1277-5p	PAR-CLIP	23446348
MIRT504928	hsa-miR-5011-5p	PAR-CLIP	23446348
MIRT504927	hsa-miR-586	PAR-CLIP	23446348
MIRT504926	hsa-miR-190a-3p	PAR-CLIP	23446348
MIRT504925	hsa-miR-1277-5p	PAR-CLIP	23446348
MIRT1066034	hsa-miR-1262	CLIP-seq
MIRT1066035	hsa-miR-137	CLIP-seq
MIRT1066036	hsa-miR-202	CLIP-seq
MIRT1066037	hsa-miR-25	CLIP-seq
MIRT1066038	hsa-miR-3122	CLIP-seq
MIRT1066039	hsa-miR-3160-3p	CLIP-seq
MIRT1066040	hsa-miR-3165	CLIP-seq
MIRT1066041	hsa-miR-3189-5p	CLIP-seq
MIRT1066042	hsa-miR-32	CLIP-seq
MIRT1066043	hsa-miR-337-3p	CLIP-seq
MIRT1066044	hsa-miR-3622a-3p	CLIP-seq
MIRT1066045	hsa-miR-3622b-3p	CLIP-seq
MIRT1066046	hsa-miR-363	CLIP-seq
MIRT1066047	hsa-miR-3665	CLIP-seq
MIRT1066048	hsa-miR-367	CLIP-seq
MIRT1066049	hsa-miR-3672	CLIP-seq
MIRT1066050	hsa-miR-3685	CLIP-seq
MIRT1066051	hsa-miR-3689a-3p	CLIP-seq
MIRT1066052	hsa-miR-3689c	CLIP-seq
MIRT1066053	hsa-miR-3714	CLIP-seq
MIRT1066054	hsa-miR-384	CLIP-seq
MIRT1066055	hsa-miR-3913-5p	CLIP-seq
MIRT1066056	hsa-miR-3926	CLIP-seq
MIRT1066057	hsa-miR-3942-3p	CLIP-seq
MIRT1066058	hsa-miR-4325	CLIP-seq
MIRT1066059	hsa-miR-4328	CLIP-seq
MIRT1066060	hsa-miR-4433	CLIP-seq
MIRT1066061	hsa-miR-4459	CLIP-seq
MIRT1066062	hsa-miR-450b-5p	CLIP-seq
MIRT1066063	hsa-miR-4668-3p	CLIP-seq
MIRT1066064	hsa-miR-4678	CLIP-seq
MIRT1066065	hsa-miR-4701-3p	CLIP-seq
MIRT1066066	hsa-miR-4704-5p	CLIP-seq
MIRT1066067	hsa-miR-4709-5p	CLIP-seq
MIRT1066068	hsa-miR-4720-3p	CLIP-seq
MIRT1066069	hsa-miR-4728-5p	CLIP-seq
MIRT1066070	hsa-miR-4736	CLIP-seq
MIRT1066071	hsa-miR-4768-3p	CLIP-seq
MIRT1066072	hsa-miR-4773	CLIP-seq
MIRT1066073	hsa-miR-4775	CLIP-seq
MIRT1066074	hsa-miR-4786-5p	CLIP-seq
MIRT1066075	hsa-miR-4789-3p	CLIP-seq
MIRT1066076	hsa-miR-4804-3p	CLIP-seq
MIRT1066077	hsa-miR-508-5p	CLIP-seq
MIRT1066078	hsa-miR-518a-5p	CLIP-seq
MIRT1066079	hsa-miR-527	CLIP-seq
MIRT1066080	hsa-miR-542-3p	CLIP-seq
MIRT1066081	hsa-miR-544b	CLIP-seq
MIRT1066082	hsa-miR-548ac	CLIP-seq
MIRT1066083	hsa-miR-548d-3p	CLIP-seq
MIRT1066084	hsa-miR-548s	CLIP-seq
MIRT1066085	hsa-miR-548z	CLIP-seq
MIRT1066086	hsa-miR-661	CLIP-seq
MIRT1066087	hsa-miR-766	CLIP-seq
MIRT1066088	hsa-miR-769-5p	CLIP-seq
MIRT1066089	hsa-miR-92a	CLIP-seq
MIRT1066090	hsa-miR-92b	CLIP-seq
MIRT1066091	hsa-miR-940	CLIP-seq
MIRT1066040	hsa-miR-3165	CLIP-seq
MIRT1066044	hsa-miR-3622a-3p	CLIP-seq
MIRT1066045	hsa-miR-3622b-3p	CLIP-seq
MIRT1066047	hsa-miR-3665	CLIP-seq
MIRT1066053	hsa-miR-3714	CLIP-seq
MIRT1066060	hsa-miR-4433	CLIP-seq
MIRT1066061	hsa-miR-4459	CLIP-seq
MIRT1066070	hsa-miR-4736	CLIP-seq
MIRT1066071	hsa-miR-4768-3p	CLIP-seq
MIRT1066081	hsa-miR-544b	CLIP-seq
MIRT1066091	hsa-miR-940	CLIP-seq
MIRT2015745	hsa-miR-1202	CLIP-seq
MIRT2015746	hsa-miR-136	CLIP-seq
MIRT2015747	hsa-miR-181a	CLIP-seq
MIRT2015748	hsa-miR-181b	CLIP-seq
MIRT2015749	hsa-miR-181c	CLIP-seq
MIRT2015750	hsa-miR-181d	CLIP-seq
MIRT2015751	hsa-miR-23a	CLIP-seq
MIRT2015752	hsa-miR-23b	CLIP-seq
MIRT2015753	hsa-miR-23c	CLIP-seq
MIRT2015754	hsa-miR-24	CLIP-seq
MIRT2015755	hsa-miR-28-5p	CLIP-seq
MIRT1066038	hsa-miR-3122	CLIP-seq
MIRT2015756	hsa-miR-3139	CLIP-seq
MIRT1066039	hsa-miR-3160-3p	CLIP-seq
MIRT2015757	hsa-miR-3163	CLIP-seq
MIRT1066040	hsa-miR-3165	CLIP-seq
MIRT1066044	hsa-miR-3622a-3p	CLIP-seq
MIRT1066045	hsa-miR-3622b-3p	CLIP-seq
MIRT1066047	hsa-miR-3665	CLIP-seq
MIRT2015758	hsa-miR-3671	CLIP-seq
MIRT1066051	hsa-miR-3689a-3p	CLIP-seq
MIRT1066052	hsa-miR-3689c	CLIP-seq
MIRT1066053	hsa-miR-3714	CLIP-seq
MIRT2015759	hsa-miR-371-5p	CLIP-seq
MIRT2015760	hsa-miR-371b-5p	CLIP-seq
MIRT2015761	hsa-miR-377	CLIP-seq
MIRT1066055	hsa-miR-3913-5p	CLIP-seq
MIRT2015762	hsa-miR-3972	CLIP-seq
MIRT2015763	hsa-miR-4262	CLIP-seq
MIRT2015764	hsa-miR-4277	CLIP-seq
MIRT2015765	hsa-miR-4284	CLIP-seq
MIRT1066060	hsa-miR-4433	CLIP-seq
MIRT1066061	hsa-miR-4459	CLIP-seq
MIRT2015766	hsa-miR-4667-3p	CLIP-seq
MIRT2015767	hsa-miR-4696	CLIP-seq
MIRT1066067	hsa-miR-4709-5p	CLIP-seq
MIRT1066069	hsa-miR-4728-5p	CLIP-seq
MIRT1066070	hsa-miR-4736	CLIP-seq
MIRT2015768	hsa-miR-4755-3p	CLIP-seq
MIRT1066071	hsa-miR-4768-3p	CLIP-seq
MIRT1066075	hsa-miR-4789-3p	CLIP-seq
MIRT2015769	hsa-miR-5096	CLIP-seq
MIRT1066080	hsa-miR-542-3p	CLIP-seq
MIRT2015770	hsa-miR-544	CLIP-seq
MIRT1066081	hsa-miR-544b	CLIP-seq
MIRT2015771	hsa-miR-633	CLIP-seq
MIRT2015772	hsa-miR-665	CLIP-seq
MIRT2015773	hsa-miR-708	CLIP-seq
MIRT2015774	hsa-miR-873	CLIP-seq
MIRT1066091	hsa-miR-940	CLIP-seq
MIRT2248184	hsa-miR-1244	CLIP-seq
MIRT1066034	hsa-miR-1262	CLIP-seq
MIRT2248185	hsa-miR-1271	CLIP-seq
MIRT2248186	hsa-miR-140-3p	CLIP-seq
MIRT2248187	hsa-miR-151-5p	CLIP-seq
MIRT2248188	hsa-miR-151b	CLIP-seq
MIRT2015747	hsa-miR-181a	CLIP-seq
MIRT2015748	hsa-miR-181b	CLIP-seq
MIRT2015749	hsa-miR-181c	CLIP-seq
MIRT2015750	hsa-miR-181d	CLIP-seq
MIRT2248189	hsa-miR-182	CLIP-seq
MIRT2015754	hsa-miR-24	CLIP-seq
MIRT2248190	hsa-miR-31	CLIP-seq
MIRT1066038	hsa-miR-3122	CLIP-seq
MIRT2248191	hsa-miR-3125	CLIP-seq
MIRT2248192	hsa-miR-3131	CLIP-seq
MIRT1066040	hsa-miR-3165	CLIP-seq
MIRT2248193	hsa-miR-3180-5p	CLIP-seq
MIRT2248194	hsa-miR-3545-3p	CLIP-seq
MIRT2248195	hsa-miR-3613-3p	CLIP-seq
MIRT1066044	hsa-miR-3622a-3p	CLIP-seq
MIRT1066045	hsa-miR-3622b-3p	CLIP-seq
MIRT1066047	hsa-miR-3665	CLIP-seq
MIRT1066049	hsa-miR-3672	CLIP-seq
MIRT1066051	hsa-miR-3689a-3p	CLIP-seq
MIRT1066052	hsa-miR-3689c	CLIP-seq
MIRT1066053	hsa-miR-3714	CLIP-seq
MIRT2015761	hsa-miR-377	CLIP-seq
MIRT1066055	hsa-miR-3913-5p	CLIP-seq
MIRT2248196	hsa-miR-3916	CLIP-seq
MIRT2248197	hsa-miR-3941	CLIP-seq
MIRT2015763	hsa-miR-4262	CLIP-seq
MIRT2015765	hsa-miR-4284	CLIP-seq
MIRT1066058	hsa-miR-4325	CLIP-seq
MIRT1066060	hsa-miR-4433	CLIP-seq
MIRT1066061	hsa-miR-4459	CLIP-seq
MIRT2248198	hsa-miR-4470	CLIP-seq
MIRT2248199	hsa-miR-4661-3p	CLIP-seq
MIRT1066065	hsa-miR-4701-3p	CLIP-seq
MIRT1066069	hsa-miR-4728-5p	CLIP-seq
MIRT1066070	hsa-miR-4736	CLIP-seq
MIRT1066071	hsa-miR-4768-3p	CLIP-seq
MIRT1066074	hsa-miR-4786-5p	CLIP-seq
MIRT1066075	hsa-miR-4789-3p	CLIP-seq
MIRT1066077	hsa-miR-508-5p	CLIP-seq
MIRT2248200	hsa-miR-513a-3p	CLIP-seq
MIRT1066080	hsa-miR-542-3p	CLIP-seq
MIRT2015770	hsa-miR-544	CLIP-seq
MIRT1066081	hsa-miR-544b	CLIP-seq
MIRT2248201	hsa-miR-611	CLIP-seq
MIRT2248202	hsa-miR-660	CLIP-seq
MIRT1066086	hsa-miR-661	CLIP-seq
MIRT1066087	hsa-miR-766	CLIP-seq
MIRT1066088	hsa-miR-769-5p	CLIP-seq
MIRT2248203	hsa-miR-877	CLIP-seq
MIRT1066091	hsa-miR-940	CLIP-seq
MIRT2248204	hsa-miR-944	CLIP-seq
MIRT2248205	hsa-miR-96	CLIP-seq
MIRT1066038	hsa-miR-3122	CLIP-seq
MIRT1066040	hsa-miR-3165	CLIP-seq
MIRT1066044	hsa-miR-3622a-3p	CLIP-seq
MIRT1066045	hsa-miR-3622b-3p	CLIP-seq
MIRT1066047	hsa-miR-3665	CLIP-seq
MIRT1066049	hsa-miR-3672	CLIP-seq
MIRT1066051	hsa-miR-3689a-3p	CLIP-seq
MIRT1066052	hsa-miR-3689c	CLIP-seq
MIRT1066053	hsa-miR-3714	CLIP-seq
MIRT1066055	hsa-miR-3913-5p	CLIP-seq
MIRT1066060	hsa-miR-4433	CLIP-seq
MIRT1066061	hsa-miR-4459	CLIP-seq
MIRT1066069	hsa-miR-4728-5p	CLIP-seq
MIRT1066070	hsa-miR-4736	CLIP-seq
MIRT1066071	hsa-miR-4768-3p	CLIP-seq
MIRT1066081	hsa-miR-544b	CLIP-seq
MIRT1066091	hsa-miR-940	CLIP-seq
MIRT2451817	hsa-miR-1285	CLIP-seq
MIRT1066038	hsa-miR-3122	CLIP-seq
MIRT2015757	hsa-miR-3163	CLIP-seq
MIRT1066040	hsa-miR-3165	CLIP-seq
MIRT2451818	hsa-miR-3187-5p	CLIP-seq
MIRT2451819	hsa-miR-33a	CLIP-seq
MIRT2451820	hsa-miR-33b	CLIP-seq
MIRT1066044	hsa-miR-3622a-3p	CLIP-seq
MIRT1066045	hsa-miR-3622b-3p	CLIP-seq
MIRT1066047	hsa-miR-3665	CLIP-seq
MIRT1066049	hsa-miR-3672	CLIP-seq
MIRT2451821	hsa-miR-3675-3p	CLIP-seq
MIRT1066051	hsa-miR-3689a-3p	CLIP-seq
MIRT1066052	hsa-miR-3689c	CLIP-seq
MIRT1066053	hsa-miR-3714	CLIP-seq
MIRT1066055	hsa-miR-3913-5p	CLIP-seq
MIRT1066056	hsa-miR-3926	CLIP-seq
MIRT2451822	hsa-miR-4263	CLIP-seq
MIRT1066060	hsa-miR-4433	CLIP-seq
MIRT1066061	hsa-miR-4459	CLIP-seq
MIRT2451823	hsa-miR-4521	CLIP-seq
MIRT2451824	hsa-miR-4684-5p	CLIP-seq
MIRT1066069	hsa-miR-4728-5p	CLIP-seq
MIRT1066070	hsa-miR-4736	CLIP-seq
MIRT1066071	hsa-miR-4768-3p	CLIP-seq
MIRT1066074	hsa-miR-4786-5p	CLIP-seq
MIRT1066081	hsa-miR-544b	CLIP-seq
MIRT2451825	hsa-miR-548c-3p	CLIP-seq
MIRT1066084	hsa-miR-548s	CLIP-seq
MIRT2451826	hsa-miR-612	CLIP-seq
MIRT1066088	hsa-miR-769-5p	CLIP-seq
MIRT1066091	hsa-miR-940	CLIP-seq
MIRT1066034	hsa-miR-1262	CLIP-seq
MIRT2451817	hsa-miR-1285	CLIP-seq
MIRT2015754	hsa-miR-24	CLIP-seq
MIRT1066037	hsa-miR-25	CLIP-seq
MIRT1066038	hsa-miR-3122	CLIP-seq
MIRT2015757	hsa-miR-3163	CLIP-seq
MIRT1066040	hsa-miR-3165	CLIP-seq
MIRT2451818	hsa-miR-3187-5p	CLIP-seq
MIRT1066042	hsa-miR-32	CLIP-seq
MIRT2551898	hsa-miR-323-5p	CLIP-seq
MIRT1066044	hsa-miR-3622a-3p	CLIP-seq
MIRT1066045	hsa-miR-3622b-3p	CLIP-seq
MIRT2551899	hsa-miR-3622b-5p	CLIP-seq
MIRT1066046	hsa-miR-363	CLIP-seq
MIRT1066047	hsa-miR-3665	CLIP-seq
MIRT1066048	hsa-miR-367	CLIP-seq
MIRT2015758	hsa-miR-3671	CLIP-seq
MIRT1066049	hsa-miR-3672	CLIP-seq
MIRT2451821	hsa-miR-3675-3p	CLIP-seq
MIRT1066051	hsa-miR-3689a-3p	CLIP-seq
MIRT1066052	hsa-miR-3689c	CLIP-seq
MIRT1066053	hsa-miR-3714	CLIP-seq
MIRT2015759	hsa-miR-371-5p	CLIP-seq
MIRT2015760	hsa-miR-371b-5p	CLIP-seq
MIRT1066055	hsa-miR-3913-5p	CLIP-seq
MIRT2551900	hsa-miR-3945	CLIP-seq
MIRT2551901	hsa-miR-4253	CLIP-seq
MIRT2015765	hsa-miR-4284	CLIP-seq
MIRT1066058	hsa-miR-4325	CLIP-seq
MIRT1066060	hsa-miR-4433	CLIP-seq
MIRT1066061	hsa-miR-4459	CLIP-seq
MIRT2451824	hsa-miR-4684-5p	CLIP-seq
MIRT1066065	hsa-miR-4701-3p	CLIP-seq
MIRT1066069	hsa-miR-4728-5p	CLIP-seq
MIRT1066070	hsa-miR-4736	CLIP-seq
MIRT1066071	hsa-miR-4768-3p	CLIP-seq
MIRT1066074	hsa-miR-4786-5p	CLIP-seq
MIRT1066077	hsa-miR-508-5p	CLIP-seq
MIRT1066080	hsa-miR-542-3p	CLIP-seq
MIRT1066081	hsa-miR-544b	CLIP-seq
MIRT2451825	hsa-miR-548c-3p	CLIP-seq
MIRT2451826	hsa-miR-612	CLIP-seq
MIRT2015771	hsa-miR-633	CLIP-seq
MIRT1066086	hsa-miR-661	CLIP-seq
MIRT1066087	hsa-miR-766	CLIP-seq
MIRT1066088	hsa-miR-769-5p	CLIP-seq
MIRT2551902	hsa-miR-876-3p	CLIP-seq
MIRT1066089	hsa-miR-92a	CLIP-seq
MIRT1066090	hsa-miR-92b	CLIP-seq
MIRT1066091	hsa-miR-940	CLIP-seq
MIRT1066034	hsa-miR-1262	CLIP-seq
MIRT2451817	hsa-miR-1285	CLIP-seq
MIRT2015754	hsa-miR-24	CLIP-seq
MIRT1066038	hsa-miR-3122	CLIP-seq
MIRT2015757	hsa-miR-3163	CLIP-seq
MIRT1066040	hsa-miR-3165	CLIP-seq
MIRT2451818	hsa-miR-3187-5p	CLIP-seq
MIRT1066044	hsa-miR-3622a-3p	CLIP-seq
MIRT1066045	hsa-miR-3622b-3p	CLIP-seq
MIRT2551899	hsa-miR-3622b-5p	CLIP-seq
MIRT1066047	hsa-miR-3665	CLIP-seq
MIRT2015758	hsa-miR-3671	CLIP-seq
MIRT1066049	hsa-miR-3672	CLIP-seq
MIRT2451821	hsa-miR-3675-3p	CLIP-seq
MIRT1066051	hsa-miR-3689a-3p	CLIP-seq
MIRT1066052	hsa-miR-3689c	CLIP-seq
MIRT1066053	hsa-miR-3714	CLIP-seq
MIRT2015759	hsa-miR-371-5p	CLIP-seq
MIRT2015760	hsa-miR-371b-5p	CLIP-seq
MIRT1066055	hsa-miR-3913-5p	CLIP-seq
MIRT2551900	hsa-miR-3945	CLIP-seq
MIRT2551901	hsa-miR-4253	CLIP-seq
MIRT2015765	hsa-miR-4284	CLIP-seq
MIRT1066060	hsa-miR-4433	CLIP-seq
MIRT1066061	hsa-miR-4459	CLIP-seq
MIRT2451824	hsa-miR-4684-5p	CLIP-seq
MIRT1066065	hsa-miR-4701-3p	CLIP-seq
MIRT1066069	hsa-miR-4728-5p	CLIP-seq
MIRT1066070	hsa-miR-4736	CLIP-seq
MIRT1066071	hsa-miR-4768-3p	CLIP-seq
MIRT1066074	hsa-miR-4786-5p	CLIP-seq
MIRT1066077	hsa-miR-508-5p	CLIP-seq
MIRT1066080	hsa-miR-542-3p	CLIP-seq
MIRT1066081	hsa-miR-544b	CLIP-seq
MIRT2451825	hsa-miR-548c-3p	CLIP-seq
MIRT2451826	hsa-miR-612	CLIP-seq
MIRT1066086	hsa-miR-661	CLIP-seq
MIRT1066087	hsa-miR-766	CLIP-seq
MIRT1066088	hsa-miR-769-5p	CLIP-seq
MIRT1066091	hsa-miR-940	CLIP-seq

Show/Hide all (18)

GO ID	Ontology	Definition	Evidence	Reference
GO:0005201	Function	Extracellular matrix structural constituent	TAS	10702256
GO:0005540	Function	Hyaluronic acid binding	IBA
GO:0005540	Function	Hyaluronic acid binding	IEA
GO:0005540	Function	Hyaluronic acid binding	TAS	10702256
GO:0005576	Component	Extracellular region	IEA
GO:0007601	Process	Visual perception	IEA
GO:0007601	Process	Visual perception	TAS	10702256
GO:0008104	Process	Intracellular protein localization	IEA
GO:0008201	Function	Heparin binding	IBA
GO:0008201	Function	Heparin binding	IEA
GO:0016020	Component	Membrane	IEA
GO:0030198	Process	Extracellular matrix organization	IEA
GO:0031012	Component	Extracellular matrix	TAS	10702256
GO:0033165	Component	Interphotoreceptor matrix	IEA
GO:0042995	Component	Cell projection	IEA
GO:0043235	Component	Receptor complex	IDA	23382219
GO:0060042	Process	Retina morphogenesis in camera-type eye	IEA
GO:0071944	Component	Cell periphery	IEA

MIM	HGNC	e!Ensembl
607056	18362	ENSG00000081148

Q9BZV3

Protein name

Interphotoreceptor matrix proteoglycan 2 (Interphotoreceptor matrix proteoglycan of 200 kDa) (IPM 200) (Sialoprotein associated with cones and rods proteoglycan) (Spacrcan)

Protein function

Chondroitin sulfate- and hyaluronan-binding proteoglycan involved in the organization of interphotoreceptor matrix; may participate in the maturation and maintenance of the light-sensitive photoreceptor outer segment. Binds heparin. {ECO:0000269

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF01390	SEA	241 → 338	SEA domain	Family
PF01390	SEA	899 → 999	SEA domain	Family

Tissue specificity

TISSUE SPECIFICITY: Expressed in the retina (at protein level) (PubMed:10702256, PubMed:29777959). Expressed by photoreceptors of the interphotoreceptor matrix (IPM) surrounding both rods and cones (at protein level) (PubMed:10542133, PubMed:29777959). IP

Sequence

MIMFPLFGKISLGILIFVLIEGDFPSLTAQTYLSIEEIQEPKSAVSFLLPEESTDLSLAT
KKKQPLDRRETERQWLIRRRRSILFPNGVKICPDESVAEAVANHVKYFKVRVCQEAVWEA
FRTFWDRLPGREEYHYWMNLCEDGVTSIFEMGTNFSESVEHRSLIMKKLTYAKETVSSSE
LSSPVPVGDTSTLGDTTLSVPHPEVDAYEGASESSLERPEESISNEIENVIEEATKPAGE
QIAEFSIHLLGKQYREELQDSSSFHHQHLEEEFISEVENAFTGLPGYKEIRVLEFRSPKE
NDSGVDVYYAVTFNGEAISNTTWDLISLHSNKVENHGLVELDDKPTVVYTISNFRDYIAE
TLQQNFLLGNSSLNPDPDSLQLINVRGVLRHQTEDLVWNTQSSSLQATPSSILDNTFQAA
WPSADESITSSIPPLDFSSGPPSATGRELWSESPLGDLVSTHKLAFPSKMGLSSSPEVLE
VSSLTLHSVTPAVLQTGLPVASEERTSGSHLVEDGLANVEESEDFLSIDSLPSSSFTQPV
PKETIPSMEDSDVSLTSSPYLTSSIPFGLDSLTSKVKDQLKVSPFLPDASMEKELIFDGG
LGSGSGQKVDLITWPWSETSSEKSAEPLSKPWLEDDDSLLPAEIEDKKLVLVDKMDSTDQ
ISKHSKYEHDDRSTHFPEEEPLSGPAVPIFADTAAESASLTLPKHISEVPGVDDYSVTKA
PLILTSVAISASTDKSDQADAILREDMEQITESSNYEWFDSEVSMVKPDMQTLWTILPES
ERVWTRTSSLEKLSRDILASTPQSADRLWLSVTQSTKLPPTTISTLLEDEVIMGVQDISL
ELDRIGTDYYQPEQVQEQNGKVGSYVEMSTSVHSTEMVSVAWPTEGGDDLSYTQTSGALV
VFFSLRVTNMMFSEDLFNKNSLEYKALEQRFLELLVPYLQSNLTGFQNLEILNFRNGSIV
VNSRMKFANSVPPNVNNAVYMILEDFCTTAYNTMNLAIDKYSLDVESGDEANPCKFQACN
EFSECLVNPWSGEAKCRCFPGYLSVEERPCQSLCDLQPDFCLNDGKCDIMPGHGAICRCR
VGENWWYRGKHCEEFVSEPVIIGITIASVVGLLVIFSAIIYFFIRTLQAHHDRSERESPF
SGSSRQPDSLSSIENAVKYNPVYESHRAGCEKYEGPYPQHPFYSSASGDVIGGLSREEIR
QMYESSELSREEIQERMRVLELYANDPEFAAFVREQQVEEV

Sequence length

1241

Interactions

View interactions

414

Show/Hide Causal Diseases (13)

Phenotype Name	Clinical Significance	dbSNP ID	RCV Accession
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Abnormality of the eye	Pathogenic	rs758291149	RCV000504960
Autosomal recessive retinitis pigmentosa	Likely pathogenic; Pathogenic	rs199867882, rs786205564, rs763295314, rs1707008452, rs1706441535, rs2058802149	RCV001257827 RCV001257825 RCV001257828 RCV001257829 RCV001257826 RCV001257809
Bardet-Biedl syndrome	Likely pathogenic; Pathogenic	rs199867882	RCV005625313
Cone-rod dystrophy	Likely pathogenic; Pathogenic	rs2508989693	RCV003389514
IMPG2-related disorder	Pathogenic	rs138793555	RCV004757368
IMPG2-related recessive retinopathy	Likely pathogenic; Pathogenic	rs2509063453	RCV005362895
Macular dystrophy	Pathogenic	rs267606875	RCV000787843
Retinal dystrophy	Pathogenic; Likely pathogenic	rs1706436657, rs932467788, rs199867882, rs713993049, rs267606876, rs267606875, rs878853358, rs768660614, rs776740276, rs2508925531, rs2508918698, rs2508925411, rs764637880, rs1410860026, rs2509062524 View all (24 more)	RCV004815575 RCV004815588 RCV001074065 RCV004815211 RCV003887851 RCV003887852 RCV000225600 RCV000225378 RCV001074907 RCV004818335 RCV003890802 RCV003890805 RCV003890811 RCV003890816 RCV003890818 RCV003890821 RCV001074792 RCV000504736 RCV004817758 RCV001073392 RCV001073508 RCV001074498 RCV001074808 RCV001075539 RCV001075800 RCV001073341 RCV001074074 RCV001074036 RCV001075046 RCV001073544 RCV001074833 RCV001073934 RCV001074322 RCV001073500 RCV001075092 RCV001075366 RCV001074321 RCV001074627 RCV004813841
Retinitis pigmentosa	Likely pathogenic; Pathogenic	rs199867882, rs267606874, rs786205564, rs754995805, rs770339774, rs1553681348, rs1553687058, rs1706625164, rs1706833794, rs1707008452, rs2058802102	RCV000132676 RCV001003056 RCV001003055 RCV000504945 RCV000504727 RCV000505127 RCV000505068 RCV001199482 RCV001199821 RCV001199485 RCV001199483
Retinitis pigmentosa 56	Pathogenic; Likely pathogenic	rs1706436657, rs1197126131, rs1172733048, rs1360618530, rs267606874, rs267606876, rs267606875, rs1333793119, rs1553681433, rs1553687118, rs770399625, rs1472199114, rs764109533, rs1334444660, rs753747821, rs1706475153 View all (1 more)	RCV001591794 RCV001376201 RCV001591796 RCV005868542 RCV000003724 RCV000003726 RCV000003727 RCV005254868 RCV000625597 RCV000625596 RCV005408684 RCV005235520 RCV001376406 RCV004800690 RCV001197524 RCV001198463
Vitelliform macular dystrophy 2	Pathogenic	rs867271343	RCV001199820
Vitelliform macular dystrophy 3	Likely pathogenic	rs2509043231	RCV003221332
Vitelliform macular dystrophy 5	Likely pathogenic; Pathogenic	rs199867882, rs713993049, rs267606876, rs786205564, rs763295314, rs766305807, rs2508925531, rs1559642470, rs1706456124, rs1706441535	RCV001270127 RCV000149552 RCV006249545 RCV003987409 RCV000678577 RCV003987410 RCV003388900 RCV000735683 RCV001587262 RCV004762030

Show/Hide Unknown Diseases (4)

Phenotype Name	Clinical Significance	dbSNP ID	RCV Accession
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Gastric cancer	Uncertain significance	rs150344327	RCV005909012
Ovarian serous cystadenocarcinoma	Uncertain significance	rs537403217	RCV005897568
Prostate cancer	Uncertain significance	rs193920760	RCV000149236
Retinitis Pigmentosa, Recessive	Uncertain significance; Conflicting classifications of pathogenicity	rs886057666, rs66908707, rs567795716, rs756480190, rs886057676, rs886057665, rs886057681, rs886057682, rs886057672, rs886057683, rs377140286	RCV000338430 RCV000259765 RCV000356932 RCV000286842 RCV000401120 RCV000274815 RCV000326297 RCV000317242 RCV000378849 RCV000286323 RCV000377321 RCV000329725 RCV000288920 RCV000266114

Show/Hide Text Mining Associations (7)

Disease Name	Relationship Type	References
Associations from Text MiningDisease associations identified through Pubtator
Hearing Loss Bilateral	Associate	35608844
Retinal Diseases	Associate	24876279
Retinal Dystrophies	Associate	37127645, 39596324
Retinitis Pigmentosa	Associate	24339724, 24876279
Sveinsson Chorioretinal Atrophy	Associate	24876279
Vision Disorders	Associate	24876279, 35608844
Vitelliform Macular Dystrophy	Associate	35608844, 35900727

IMPG2 (interphotoreceptor matrix proteoglycan 2)