Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene SNPs miRNA Gene ontology Other IDs Protein Associated diseases
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	50939
Gene name Gene Name - the full gene name approved by the HGNC.	Interphotoreceptor matrix proteoglycan 2
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	IMPG2
Synonyms (NCBI Gene) Gene synonyms aliases	IPM200, RP56, SPACRCAN, VMD5
Disease Acronyms (UniProt) Disease acronyms from UniProt database	RP56, VMD5
Chromosome Chromosome number	3
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	3q12.3
Summary Summary of gene provided in NCBI Entrez Gene.	The protein encoded by this gene binds chondroitin sulfate and hyaluronan and is a proteoglycan. The encoded protein plays a role in the organization of the interphotoreceptor matrix and may promote the growth and maintenance of the light-sensitive photor

Show/Hide all(29)

SNP ID	Visualize variation	Clinical significance	Consequence
rs116450347	G>A	Conflicting-interpretations-of-pathogenicity, likely-benign, uncertain-significance	Missense variant, coding sequence variant
rs199867882	G>A	Pathogenic, likely-pathogenic	Coding sequence variant, stop gained
rs201893545	A>G	Pathogenic, likely-pathogenic	Coding sequence variant, missense variant
rs267606874	G>C	Pathogenic	Coding sequence variant, stop gained
rs267606875	G>A	Pathogenic, likely-pathogenic	Coding sequence variant, stop gained
rs267606876	G>A	Pathogenic	Coding sequence variant, stop gained
rs371805004	G>A	Conflicting-interpretations-of-pathogenicity	Coding sequence variant, synonymous variant
rs567795716	A>-,AA	Uncertain-significance, conflicting-interpretations-of-pathogenicity	Intron variant
rs713993049	C>A	Pathogenic	Missense variant, coding sequence variant
rs749723076	C>T	Likely-pathogenic	Coding sequence variant, missense variant
rs754995805	->TTCATCACCTAAAA	Likely-pathogenic	Splice acceptor variant, coding sequence variant, intron variant
rs758291149	A>G,T	Pathogenic	Stop gained, synonymous variant, coding sequence variant
rs763295314	A>C	Likely-pathogenic, pathogenic	Stop gained, coding sequence variant
rs766305807	C>G,T	Likely-pathogenic	Coding sequence variant, missense variant
rs768660614	->T	Likely-pathogenic	Coding sequence variant, frameshift variant
rs770339774	G>-	Likely-pathogenic	Coding sequence variant, frameshift variant
rs776740276	C>A	Pathogenic	Splice acceptor variant
rs786205564	C>T	Pathogenic, likely-pathogenic	Stop gained, coding sequence variant
rs786205565	G>C	Likely-pathogenic	Missense variant, coding sequence variant
rs878853357	C>A	Likely-pathogenic	Stop gained, coding sequence variant
rs878853358	AC>-	Likely-pathogenic	Frameshift variant, coding sequence variant
rs1276845142	T>A	Likely-pathogenic	Stop gained, coding sequence variant
rs1409688898	G>C	Likely-pathogenic	Coding sequence variant, stop gained
rs1553681348	C>T	Likely-pathogenic	Stop gained, coding sequence variant
rs1553681433	A>-	Pathogenic	Frameshift variant, coding sequence variant
rs1553681434	->C	Pathogenic	Frameshift variant, coding sequence variant
rs1553687058	C>A	Likely-pathogenic	Stop gained, coding sequence variant
rs1553687118	A>T	Pathogenic	Splice donor variant
rs1559642470	A>T	Likely-pathogenic	Missense variant, coding sequence variant

Show/Hide all(418)

miRTarBase ID	miRNA	Experiments	Reference
MIRT504928	hsa-miR-5011-5p	HITS-CLIP	21572407
MIRT504927	hsa-miR-586	HITS-CLIP	21572407
MIRT504926	hsa-miR-190a-3p	HITS-CLIP	21572407
MIRT504925	hsa-miR-1277-5p	HITS-CLIP	21572407
MIRT504928	hsa-miR-5011-5p	HITS-CLIP	23313552
MIRT504927	hsa-miR-586	HITS-CLIP	23313552
MIRT504926	hsa-miR-190a-3p	HITS-CLIP	23313552
MIRT504925	hsa-miR-1277-5p	HITS-CLIP	23313552
MIRT504928	hsa-miR-5011-5p	HITS-CLIP	23313552
MIRT504927	hsa-miR-586	HITS-CLIP	23313552
MIRT675898	hsa-miR-5196-3p	HITS-CLIP	23313552
MIRT675897	hsa-miR-4793-5p	HITS-CLIP	23313552
MIRT504926	hsa-miR-190a-3p	HITS-CLIP	23313552
MIRT504925	hsa-miR-1277-5p	HITS-CLIP	23313552
MIRT504928	hsa-miR-5011-5p	HITS-CLIP	23824327
MIRT504927	hsa-miR-586	HITS-CLIP	23824327
MIRT675898	hsa-miR-5196-3p	HITS-CLIP	23824327
MIRT675897	hsa-miR-4793-5p	HITS-CLIP	23824327
MIRT504926	hsa-miR-190a-3p	HITS-CLIP	23824327
MIRT504925	hsa-miR-1277-5p	HITS-CLIP	23824327
MIRT504928	hsa-miR-5011-5p	PAR-CLIP	20371350
MIRT504927	hsa-miR-586	PAR-CLIP	20371350
MIRT504926	hsa-miR-190a-3p	PAR-CLIP	20371350
MIRT504925	hsa-miR-1277-5p	PAR-CLIP	20371350
MIRT504928	hsa-miR-5011-5p	PAR-CLIP	21572407
MIRT504927	hsa-miR-586	PAR-CLIP	21572407
MIRT504926	hsa-miR-190a-3p	PAR-CLIP	21572407
MIRT522994	hsa-miR-6083	PAR-CLIP	21572407
MIRT504925	hsa-miR-1277-5p	PAR-CLIP	21572407
MIRT504928	hsa-miR-5011-5p	PAR-CLIP	21572407
MIRT504927	hsa-miR-586	PAR-CLIP	21572407
MIRT504926	hsa-miR-190a-3p	PAR-CLIP	21572407
MIRT504925	hsa-miR-1277-5p	PAR-CLIP	21572407
MIRT504928	hsa-miR-5011-5p	PAR-CLIP	23446348
MIRT504927	hsa-miR-586	PAR-CLIP	23446348
MIRT504926	hsa-miR-190a-3p	PAR-CLIP	23446348
MIRT522995	hsa-miR-4799-5p	PAR-CLIP	23446348
MIRT522994	hsa-miR-6083	PAR-CLIP	23446348
MIRT504925	hsa-miR-1277-5p	PAR-CLIP	23446348
MIRT504928	hsa-miR-5011-5p	PAR-CLIP	23446348
MIRT504927	hsa-miR-586	PAR-CLIP	23446348
MIRT504926	hsa-miR-190a-3p	PAR-CLIP	23446348
MIRT504925	hsa-miR-1277-5p	PAR-CLIP	23446348
MIRT504928	hsa-miR-5011-5p	PAR-CLIP	23446348
MIRT504927	hsa-miR-586	PAR-CLIP	23446348
MIRT504926	hsa-miR-190a-3p	PAR-CLIP	23446348
MIRT504925	hsa-miR-1277-5p	PAR-CLIP	23446348
MIRT504928	hsa-miR-5011-5p	PAR-CLIP	23446348
MIRT504927	hsa-miR-586	PAR-CLIP	23446348
MIRT504926	hsa-miR-190a-3p	PAR-CLIP	23446348
MIRT504925	hsa-miR-1277-5p	PAR-CLIP	23446348
MIRT504928	hsa-miR-5011-5p	HITS-CLIP	21572407
MIRT504927	hsa-miR-586	HITS-CLIP	21572407
MIRT504926	hsa-miR-190a-3p	HITS-CLIP	21572407
MIRT504925	hsa-miR-1277-5p	HITS-CLIP	21572407
MIRT504928	hsa-miR-5011-5p	HITS-CLIP	23313552
MIRT504927	hsa-miR-586	HITS-CLIP	23313552
MIRT504926	hsa-miR-190a-3p	HITS-CLIP	23313552
MIRT504925	hsa-miR-1277-5p	HITS-CLIP	23313552
MIRT504928	hsa-miR-5011-5p	HITS-CLIP	23313552
MIRT504927	hsa-miR-586	HITS-CLIP	23313552
MIRT675898	hsa-miR-5196-3p	HITS-CLIP	23313552
MIRT675897	hsa-miR-4793-5p	HITS-CLIP	23313552
MIRT504926	hsa-miR-190a-3p	HITS-CLIP	23313552
MIRT504925	hsa-miR-1277-5p	HITS-CLIP	23313552
MIRT504928	hsa-miR-5011-5p	HITS-CLIP	23824327
MIRT504927	hsa-miR-586	HITS-CLIP	23824327
MIRT675898	hsa-miR-5196-3p	HITS-CLIP	23824327
MIRT675897	hsa-miR-4793-5p	HITS-CLIP	23824327
MIRT504926	hsa-miR-190a-3p	HITS-CLIP	23824327
MIRT504925	hsa-miR-1277-5p	HITS-CLIP	23824327
MIRT504928	hsa-miR-5011-5p	PAR-CLIP	20371350
MIRT504927	hsa-miR-586	PAR-CLIP	20371350
MIRT504926	hsa-miR-190a-3p	PAR-CLIP	20371350
MIRT504925	hsa-miR-1277-5p	PAR-CLIP	20371350
MIRT504928	hsa-miR-5011-5p	PAR-CLIP	21572407
MIRT504927	hsa-miR-586	PAR-CLIP	21572407
MIRT504926	hsa-miR-190a-3p	PAR-CLIP	21572407
MIRT522994	hsa-miR-6083	PAR-CLIP	21572407
MIRT504925	hsa-miR-1277-5p	PAR-CLIP	21572407
MIRT504928	hsa-miR-5011-5p	PAR-CLIP	21572407
MIRT504927	hsa-miR-586	PAR-CLIP	21572407
MIRT504926	hsa-miR-190a-3p	PAR-CLIP	21572407
MIRT504925	hsa-miR-1277-5p	PAR-CLIP	21572407
MIRT504928	hsa-miR-5011-5p	PAR-CLIP	23446348
MIRT504927	hsa-miR-586	PAR-CLIP	23446348
MIRT504926	hsa-miR-190a-3p	PAR-CLIP	23446348
MIRT522995	hsa-miR-4799-5p	PAR-CLIP	23446348
MIRT522994	hsa-miR-6083	PAR-CLIP	23446348
MIRT504925	hsa-miR-1277-5p	PAR-CLIP	23446348
MIRT504928	hsa-miR-5011-5p	PAR-CLIP	23446348
MIRT504927	hsa-miR-586	PAR-CLIP	23446348
MIRT504926	hsa-miR-190a-3p	PAR-CLIP	23446348
MIRT504925	hsa-miR-1277-5p	PAR-CLIP	23446348
MIRT504928	hsa-miR-5011-5p	PAR-CLIP	23446348
MIRT504927	hsa-miR-586	PAR-CLIP	23446348
MIRT504926	hsa-miR-190a-3p	PAR-CLIP	23446348
MIRT504925	hsa-miR-1277-5p	PAR-CLIP	23446348
MIRT504928	hsa-miR-5011-5p	PAR-CLIP	23446348
MIRT504927	hsa-miR-586	PAR-CLIP	23446348
MIRT504926	hsa-miR-190a-3p	PAR-CLIP	23446348
MIRT504925	hsa-miR-1277-5p	PAR-CLIP	23446348
MIRT1066034	hsa-miR-1262	CLIP-seq
MIRT1066035	hsa-miR-137	CLIP-seq
MIRT1066036	hsa-miR-202	CLIP-seq
MIRT1066037	hsa-miR-25	CLIP-seq
MIRT1066038	hsa-miR-3122	CLIP-seq
MIRT1066039	hsa-miR-3160-3p	CLIP-seq
MIRT1066040	hsa-miR-3165	CLIP-seq
MIRT1066041	hsa-miR-3189-5p	CLIP-seq
MIRT1066042	hsa-miR-32	CLIP-seq
MIRT1066043	hsa-miR-337-3p	CLIP-seq
MIRT1066044	hsa-miR-3622a-3p	CLIP-seq
MIRT1066045	hsa-miR-3622b-3p	CLIP-seq
MIRT1066046	hsa-miR-363	CLIP-seq
MIRT1066047	hsa-miR-3665	CLIP-seq
MIRT1066048	hsa-miR-367	CLIP-seq
MIRT1066049	hsa-miR-3672	CLIP-seq
MIRT1066050	hsa-miR-3685	CLIP-seq
MIRT1066051	hsa-miR-3689a-3p	CLIP-seq
MIRT1066052	hsa-miR-3689c	CLIP-seq
MIRT1066053	hsa-miR-3714	CLIP-seq
MIRT1066054	hsa-miR-384	CLIP-seq
MIRT1066055	hsa-miR-3913-5p	CLIP-seq
MIRT1066056	hsa-miR-3926	CLIP-seq
MIRT1066057	hsa-miR-3942-3p	CLIP-seq
MIRT1066058	hsa-miR-4325	CLIP-seq
MIRT1066059	hsa-miR-4328	CLIP-seq
MIRT1066060	hsa-miR-4433	CLIP-seq
MIRT1066061	hsa-miR-4459	CLIP-seq
MIRT1066062	hsa-miR-450b-5p	CLIP-seq
MIRT1066063	hsa-miR-4668-3p	CLIP-seq
MIRT1066064	hsa-miR-4678	CLIP-seq
MIRT1066065	hsa-miR-4701-3p	CLIP-seq
MIRT1066066	hsa-miR-4704-5p	CLIP-seq
MIRT1066067	hsa-miR-4709-5p	CLIP-seq
MIRT1066068	hsa-miR-4720-3p	CLIP-seq
MIRT1066069	hsa-miR-4728-5p	CLIP-seq
MIRT1066070	hsa-miR-4736	CLIP-seq
MIRT1066071	hsa-miR-4768-3p	CLIP-seq
MIRT1066072	hsa-miR-4773	CLIP-seq
MIRT1066073	hsa-miR-4775	CLIP-seq
MIRT1066074	hsa-miR-4786-5p	CLIP-seq
MIRT1066075	hsa-miR-4789-3p	CLIP-seq
MIRT1066076	hsa-miR-4804-3p	CLIP-seq
MIRT1066077	hsa-miR-508-5p	CLIP-seq
MIRT1066078	hsa-miR-518a-5p	CLIP-seq
MIRT1066079	hsa-miR-527	CLIP-seq
MIRT1066080	hsa-miR-542-3p	CLIP-seq
MIRT1066081	hsa-miR-544b	CLIP-seq
MIRT1066082	hsa-miR-548ac	CLIP-seq
MIRT1066083	hsa-miR-548d-3p	CLIP-seq
MIRT1066084	hsa-miR-548s	CLIP-seq
MIRT1066085	hsa-miR-548z	CLIP-seq
MIRT1066086	hsa-miR-661	CLIP-seq
MIRT1066087	hsa-miR-766	CLIP-seq
MIRT1066088	hsa-miR-769-5p	CLIP-seq
MIRT1066089	hsa-miR-92a	CLIP-seq
MIRT1066090	hsa-miR-92b	CLIP-seq
MIRT1066091	hsa-miR-940	CLIP-seq
MIRT1066040	hsa-miR-3165	CLIP-seq
MIRT1066044	hsa-miR-3622a-3p	CLIP-seq
MIRT1066045	hsa-miR-3622b-3p	CLIP-seq
MIRT1066047	hsa-miR-3665	CLIP-seq
MIRT1066053	hsa-miR-3714	CLIP-seq
MIRT1066060	hsa-miR-4433	CLIP-seq
MIRT1066061	hsa-miR-4459	CLIP-seq
MIRT1066070	hsa-miR-4736	CLIP-seq
MIRT1066071	hsa-miR-4768-3p	CLIP-seq
MIRT1066081	hsa-miR-544b	CLIP-seq
MIRT1066091	hsa-miR-940	CLIP-seq
MIRT2015745	hsa-miR-1202	CLIP-seq
MIRT2015746	hsa-miR-136	CLIP-seq
MIRT2015747	hsa-miR-181a	CLIP-seq
MIRT2015748	hsa-miR-181b	CLIP-seq
MIRT2015749	hsa-miR-181c	CLIP-seq
MIRT2015750	hsa-miR-181d	CLIP-seq
MIRT2015751	hsa-miR-23a	CLIP-seq
MIRT2015752	hsa-miR-23b	CLIP-seq
MIRT2015753	hsa-miR-23c	CLIP-seq
MIRT2015754	hsa-miR-24	CLIP-seq
MIRT2015755	hsa-miR-28-5p	CLIP-seq
MIRT1066038	hsa-miR-3122	CLIP-seq
MIRT2015756	hsa-miR-3139	CLIP-seq
MIRT1066039	hsa-miR-3160-3p	CLIP-seq
MIRT2015757	hsa-miR-3163	CLIP-seq
MIRT1066040	hsa-miR-3165	CLIP-seq
MIRT1066044	hsa-miR-3622a-3p	CLIP-seq
MIRT1066045	hsa-miR-3622b-3p	CLIP-seq
MIRT1066047	hsa-miR-3665	CLIP-seq
MIRT2015758	hsa-miR-3671	CLIP-seq
MIRT1066051	hsa-miR-3689a-3p	CLIP-seq
MIRT1066052	hsa-miR-3689c	CLIP-seq
MIRT1066053	hsa-miR-3714	CLIP-seq
MIRT2015759	hsa-miR-371-5p	CLIP-seq
MIRT2015760	hsa-miR-371b-5p	CLIP-seq
MIRT2015761	hsa-miR-377	CLIP-seq
MIRT1066055	hsa-miR-3913-5p	CLIP-seq
MIRT2015762	hsa-miR-3972	CLIP-seq
MIRT2015763	hsa-miR-4262	CLIP-seq
MIRT2015764	hsa-miR-4277	CLIP-seq
MIRT2015765	hsa-miR-4284	CLIP-seq
MIRT1066060	hsa-miR-4433	CLIP-seq
MIRT1066061	hsa-miR-4459	CLIP-seq
MIRT2015766	hsa-miR-4667-3p	CLIP-seq
MIRT2015767	hsa-miR-4696	CLIP-seq
MIRT1066067	hsa-miR-4709-5p	CLIP-seq
MIRT1066069	hsa-miR-4728-5p	CLIP-seq
MIRT1066070	hsa-miR-4736	CLIP-seq
MIRT2015768	hsa-miR-4755-3p	CLIP-seq
MIRT1066071	hsa-miR-4768-3p	CLIP-seq
MIRT1066075	hsa-miR-4789-3p	CLIP-seq
MIRT2015769	hsa-miR-5096	CLIP-seq
MIRT1066080	hsa-miR-542-3p	CLIP-seq
MIRT2015770	hsa-miR-544	CLIP-seq
MIRT1066081	hsa-miR-544b	CLIP-seq
MIRT2015771	hsa-miR-633	CLIP-seq
MIRT2015772	hsa-miR-665	CLIP-seq
MIRT2015773	hsa-miR-708	CLIP-seq
MIRT2015774	hsa-miR-873	CLIP-seq
MIRT1066091	hsa-miR-940	CLIP-seq
MIRT2248184	hsa-miR-1244	CLIP-seq
MIRT1066034	hsa-miR-1262	CLIP-seq
MIRT2248185	hsa-miR-1271	CLIP-seq
MIRT2248186	hsa-miR-140-3p	CLIP-seq
MIRT2248187	hsa-miR-151-5p	CLIP-seq
MIRT2248188	hsa-miR-151b	CLIP-seq
MIRT2015747	hsa-miR-181a	CLIP-seq
MIRT2015748	hsa-miR-181b	CLIP-seq
MIRT2015749	hsa-miR-181c	CLIP-seq
MIRT2015750	hsa-miR-181d	CLIP-seq
MIRT2248189	hsa-miR-182	CLIP-seq
MIRT2015754	hsa-miR-24	CLIP-seq
MIRT2248190	hsa-miR-31	CLIP-seq
MIRT1066038	hsa-miR-3122	CLIP-seq
MIRT2248191	hsa-miR-3125	CLIP-seq
MIRT2248192	hsa-miR-3131	CLIP-seq
MIRT1066040	hsa-miR-3165	CLIP-seq
MIRT2248193	hsa-miR-3180-5p	CLIP-seq
MIRT2248194	hsa-miR-3545-3p	CLIP-seq
MIRT2248195	hsa-miR-3613-3p	CLIP-seq
MIRT1066044	hsa-miR-3622a-3p	CLIP-seq
MIRT1066045	hsa-miR-3622b-3p	CLIP-seq
MIRT1066047	hsa-miR-3665	CLIP-seq
MIRT1066049	hsa-miR-3672	CLIP-seq
MIRT1066051	hsa-miR-3689a-3p	CLIP-seq
MIRT1066052	hsa-miR-3689c	CLIP-seq
MIRT1066053	hsa-miR-3714	CLIP-seq
MIRT2015761	hsa-miR-377	CLIP-seq
MIRT1066055	hsa-miR-3913-5p	CLIP-seq
MIRT2248196	hsa-miR-3916	CLIP-seq
MIRT2248197	hsa-miR-3941	CLIP-seq
MIRT2015763	hsa-miR-4262	CLIP-seq
MIRT2015765	hsa-miR-4284	CLIP-seq
MIRT1066058	hsa-miR-4325	CLIP-seq
MIRT1066060	hsa-miR-4433	CLIP-seq
MIRT1066061	hsa-miR-4459	CLIP-seq
MIRT2248198	hsa-miR-4470	CLIP-seq
MIRT2248199	hsa-miR-4661-3p	CLIP-seq
MIRT1066065	hsa-miR-4701-3p	CLIP-seq
MIRT1066069	hsa-miR-4728-5p	CLIP-seq
MIRT1066070	hsa-miR-4736	CLIP-seq
MIRT1066071	hsa-miR-4768-3p	CLIP-seq
MIRT1066074	hsa-miR-4786-5p	CLIP-seq
MIRT1066075	hsa-miR-4789-3p	CLIP-seq
MIRT1066077	hsa-miR-508-5p	CLIP-seq
MIRT2248200	hsa-miR-513a-3p	CLIP-seq
MIRT1066080	hsa-miR-542-3p	CLIP-seq
MIRT2015770	hsa-miR-544	CLIP-seq
MIRT1066081	hsa-miR-544b	CLIP-seq
MIRT2248201	hsa-miR-611	CLIP-seq
MIRT2248202	hsa-miR-660	CLIP-seq
MIRT1066086	hsa-miR-661	CLIP-seq
MIRT1066087	hsa-miR-766	CLIP-seq
MIRT1066088	hsa-miR-769-5p	CLIP-seq
MIRT2248203	hsa-miR-877	CLIP-seq
MIRT1066091	hsa-miR-940	CLIP-seq
MIRT2248204	hsa-miR-944	CLIP-seq
MIRT2248205	hsa-miR-96	CLIP-seq
MIRT1066038	hsa-miR-3122	CLIP-seq
MIRT1066040	hsa-miR-3165	CLIP-seq
MIRT1066044	hsa-miR-3622a-3p	CLIP-seq
MIRT1066045	hsa-miR-3622b-3p	CLIP-seq
MIRT1066047	hsa-miR-3665	CLIP-seq
MIRT1066049	hsa-miR-3672	CLIP-seq
MIRT1066051	hsa-miR-3689a-3p	CLIP-seq
MIRT1066052	hsa-miR-3689c	CLIP-seq
MIRT1066053	hsa-miR-3714	CLIP-seq
MIRT1066055	hsa-miR-3913-5p	CLIP-seq
MIRT1066060	hsa-miR-4433	CLIP-seq
MIRT1066061	hsa-miR-4459	CLIP-seq
MIRT1066069	hsa-miR-4728-5p	CLIP-seq
MIRT1066070	hsa-miR-4736	CLIP-seq
MIRT1066071	hsa-miR-4768-3p	CLIP-seq
MIRT1066081	hsa-miR-544b	CLIP-seq
MIRT1066091	hsa-miR-940	CLIP-seq
MIRT2451817	hsa-miR-1285	CLIP-seq
MIRT1066038	hsa-miR-3122	CLIP-seq
MIRT2015757	hsa-miR-3163	CLIP-seq
MIRT1066040	hsa-miR-3165	CLIP-seq
MIRT2451818	hsa-miR-3187-5p	CLIP-seq
MIRT2451819	hsa-miR-33a	CLIP-seq
MIRT2451820	hsa-miR-33b	CLIP-seq
MIRT1066044	hsa-miR-3622a-3p	CLIP-seq
MIRT1066045	hsa-miR-3622b-3p	CLIP-seq
MIRT1066047	hsa-miR-3665	CLIP-seq
MIRT1066049	hsa-miR-3672	CLIP-seq
MIRT2451821	hsa-miR-3675-3p	CLIP-seq
MIRT1066051	hsa-miR-3689a-3p	CLIP-seq
MIRT1066052	hsa-miR-3689c	CLIP-seq
MIRT1066053	hsa-miR-3714	CLIP-seq
MIRT1066055	hsa-miR-3913-5p	CLIP-seq
MIRT1066056	hsa-miR-3926	CLIP-seq
MIRT2451822	hsa-miR-4263	CLIP-seq
MIRT1066060	hsa-miR-4433	CLIP-seq
MIRT1066061	hsa-miR-4459	CLIP-seq
MIRT2451823	hsa-miR-4521	CLIP-seq
MIRT2451824	hsa-miR-4684-5p	CLIP-seq
MIRT1066069	hsa-miR-4728-5p	CLIP-seq
MIRT1066070	hsa-miR-4736	CLIP-seq
MIRT1066071	hsa-miR-4768-3p	CLIP-seq
MIRT1066074	hsa-miR-4786-5p	CLIP-seq
MIRT1066081	hsa-miR-544b	CLIP-seq
MIRT2451825	hsa-miR-548c-3p	CLIP-seq
MIRT1066084	hsa-miR-548s	CLIP-seq
MIRT2451826	hsa-miR-612	CLIP-seq
MIRT1066088	hsa-miR-769-5p	CLIP-seq
MIRT1066091	hsa-miR-940	CLIP-seq
MIRT1066034	hsa-miR-1262	CLIP-seq
MIRT2451817	hsa-miR-1285	CLIP-seq
MIRT2015754	hsa-miR-24	CLIP-seq
MIRT1066037	hsa-miR-25	CLIP-seq
MIRT1066038	hsa-miR-3122	CLIP-seq
MIRT2015757	hsa-miR-3163	CLIP-seq
MIRT1066040	hsa-miR-3165	CLIP-seq
MIRT2451818	hsa-miR-3187-5p	CLIP-seq
MIRT1066042	hsa-miR-32	CLIP-seq
MIRT2551898	hsa-miR-323-5p	CLIP-seq
MIRT1066044	hsa-miR-3622a-3p	CLIP-seq
MIRT1066045	hsa-miR-3622b-3p	CLIP-seq
MIRT2551899	hsa-miR-3622b-5p	CLIP-seq
MIRT1066046	hsa-miR-363	CLIP-seq
MIRT1066047	hsa-miR-3665	CLIP-seq
MIRT1066048	hsa-miR-367	CLIP-seq
MIRT2015758	hsa-miR-3671	CLIP-seq
MIRT1066049	hsa-miR-3672	CLIP-seq
MIRT2451821	hsa-miR-3675-3p	CLIP-seq
MIRT1066051	hsa-miR-3689a-3p	CLIP-seq
MIRT1066052	hsa-miR-3689c	CLIP-seq
MIRT1066053	hsa-miR-3714	CLIP-seq
MIRT2015759	hsa-miR-371-5p	CLIP-seq
MIRT2015760	hsa-miR-371b-5p	CLIP-seq
MIRT1066055	hsa-miR-3913-5p	CLIP-seq
MIRT2551900	hsa-miR-3945	CLIP-seq
MIRT2551901	hsa-miR-4253	CLIP-seq
MIRT2015765	hsa-miR-4284	CLIP-seq
MIRT1066058	hsa-miR-4325	CLIP-seq
MIRT1066060	hsa-miR-4433	CLIP-seq
MIRT1066061	hsa-miR-4459	CLIP-seq
MIRT2451824	hsa-miR-4684-5p	CLIP-seq
MIRT1066065	hsa-miR-4701-3p	CLIP-seq
MIRT1066069	hsa-miR-4728-5p	CLIP-seq
MIRT1066070	hsa-miR-4736	CLIP-seq
MIRT1066071	hsa-miR-4768-3p	CLIP-seq
MIRT1066074	hsa-miR-4786-5p	CLIP-seq
MIRT1066077	hsa-miR-508-5p	CLIP-seq
MIRT1066080	hsa-miR-542-3p	CLIP-seq
MIRT1066081	hsa-miR-544b	CLIP-seq
MIRT2451825	hsa-miR-548c-3p	CLIP-seq
MIRT2451826	hsa-miR-612	CLIP-seq
MIRT2015771	hsa-miR-633	CLIP-seq
MIRT1066086	hsa-miR-661	CLIP-seq
MIRT1066087	hsa-miR-766	CLIP-seq
MIRT1066088	hsa-miR-769-5p	CLIP-seq
MIRT2551902	hsa-miR-876-3p	CLIP-seq
MIRT1066089	hsa-miR-92a	CLIP-seq
MIRT1066090	hsa-miR-92b	CLIP-seq
MIRT1066091	hsa-miR-940	CLIP-seq
MIRT1066034	hsa-miR-1262	CLIP-seq
MIRT2451817	hsa-miR-1285	CLIP-seq
MIRT2015754	hsa-miR-24	CLIP-seq
MIRT1066038	hsa-miR-3122	CLIP-seq
MIRT2015757	hsa-miR-3163	CLIP-seq
MIRT1066040	hsa-miR-3165	CLIP-seq
MIRT2451818	hsa-miR-3187-5p	CLIP-seq
MIRT1066044	hsa-miR-3622a-3p	CLIP-seq
MIRT1066045	hsa-miR-3622b-3p	CLIP-seq
MIRT2551899	hsa-miR-3622b-5p	CLIP-seq
MIRT1066047	hsa-miR-3665	CLIP-seq
MIRT2015758	hsa-miR-3671	CLIP-seq
MIRT1066049	hsa-miR-3672	CLIP-seq
MIRT2451821	hsa-miR-3675-3p	CLIP-seq
MIRT1066051	hsa-miR-3689a-3p	CLIP-seq
MIRT1066052	hsa-miR-3689c	CLIP-seq
MIRT1066053	hsa-miR-3714	CLIP-seq
MIRT2015759	hsa-miR-371-5p	CLIP-seq
MIRT2015760	hsa-miR-371b-5p	CLIP-seq
MIRT1066055	hsa-miR-3913-5p	CLIP-seq
MIRT2551900	hsa-miR-3945	CLIP-seq
MIRT2551901	hsa-miR-4253	CLIP-seq
MIRT2015765	hsa-miR-4284	CLIP-seq
MIRT1066060	hsa-miR-4433	CLIP-seq
MIRT1066061	hsa-miR-4459	CLIP-seq
MIRT2451824	hsa-miR-4684-5p	CLIP-seq
MIRT1066065	hsa-miR-4701-3p	CLIP-seq
MIRT1066069	hsa-miR-4728-5p	CLIP-seq
MIRT1066070	hsa-miR-4736	CLIP-seq
MIRT1066071	hsa-miR-4768-3p	CLIP-seq
MIRT1066074	hsa-miR-4786-5p	CLIP-seq
MIRT1066077	hsa-miR-508-5p	CLIP-seq
MIRT1066080	hsa-miR-542-3p	CLIP-seq
MIRT1066081	hsa-miR-544b	CLIP-seq
MIRT2451825	hsa-miR-548c-3p	CLIP-seq
MIRT2451826	hsa-miR-612	CLIP-seq
MIRT1066086	hsa-miR-661	CLIP-seq
MIRT1066087	hsa-miR-766	CLIP-seq
MIRT1066088	hsa-miR-769-5p	CLIP-seq
MIRT1066091	hsa-miR-940	CLIP-seq

Show/Hide all(10)

GO ID	Ontology	Definition	Evidence	Reference
GO:0005201	Function	Extracellular matrix structural constituent	TAS	10702256
GO:0005540	Function	Hyaluronic acid binding	IBA	21873635
GO:0005540	Function	Hyaluronic acid binding	TAS	10702256
GO:0007601	Process	Visual perception	TAS	10702256
GO:0008201	Function	Heparin binding	IBA	21873635
GO:0016021	Component	Integral component of membrane	IEA
GO:0031012	Component	Extracellular matrix	TAS	10702256
GO:0033165	Component	Interphotoreceptor matrix	IEA
GO:0042995	Component	Cell projection	IEA
GO:0043235	Component	Receptor complex	IDA	23382219

MIM	HGNC	e!Ensembl
607056	18362	ENSG00000081148

Protein

UniProt ID

Q9BZV3

Protein name

Interphotoreceptor matrix proteoglycan 2 (Interphotoreceptor matrix proteoglycan of 200 kDa) (IPM 200) (Sialoprotein associated with cones and rods proteoglycan) (Spacrcan)

Protein function

Chondroitin sulfate- and hyaluronan-binding proteoglycan involved in the organization of interphotoreceptor matrix; may participate in the maturation and maintenance of the light-sensitive photoreceptor outer segment. Binds heparin. {ECO:0000269

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF01390	SEA	241 → 338	SEA domain	Family
PF01390	SEA	899 → 999	SEA domain	Family

Tissue specificity

TISSUE SPECIFICITY: Expressed in the retina (at protein level) (PubMed:10702256, PubMed:29777959). Expressed by photoreceptors of the interphotoreceptor matrix (IPM) surrounding both rods and cones (at protein level) (PubMed:10542133, PubMed:29777959). IP

Sequence

MIMFPLFGKISLGILIFVLIEGDFPSLTAQTYLSIEEIQEPKSAVSFLLPEESTDLSLAT
KKKQPLDRRETERQWLIRRRRSILFPNGVKICPDESVAEAVANHVKYFKVRVCQEAVWEA
FRTFWDRLPGREEYHYWMNLCEDGVTSIFEMGTNFSESVEHRSLIMKKLTYAKETVSSSE
LSSPVPVGDTSTLGDTTLSVPHPEVDAYEGASESSLERPEESISNEIENVIEEATKPAGE
QIAEFSIHLLGKQYREELQDSSSFHHQHLEEEFISEVENAFTGLPGYKEIRVLEFRSPKE
NDSGVDVYYAVTFNGEAISNTTWDLISLHSNKVENHGLVELDDKPTVVYTISNFRDYIAE
TLQQNFLLGNSSLNPDPDSLQLINVRGVLRHQTEDLVWNTQSSSLQATPSSILDNTFQAA
WPSADESITSSIPPLDFSSGPPSATGRELWSESPLGDLVSTHKLAFPSKMGLSSSPEVLE
VSSLTLHSVTPAVLQTGLPVASEERTSGSHLVEDGLANVEESEDFLSIDSLPSSSFTQPV
PKETIPSMEDSDVSLTSSPYLTSSIPFGLDSLTSKVKDQLKVSPFLPDASMEKELIFDGG
LGSGSGQKVDLITWPWSETSSEKSAEPLSKPWLEDDDSLLPAEIEDKKLVLVDKMDSTDQ
ISKHSKYEHDDRSTHFPEEEPLSGPAVPIFADTAAESASLTLPKHISEVPGVDDYSVTKA
PLILTSVAISASTDKSDQADAILREDMEQITESSNYEWFDSEVSMVKPDMQTLWTILPES
ERVWTRTSSLEKLSRDILASTPQSADRLWLSVTQSTKLPPTTISTLLEDEVIMGVQDISL
ELDRIGTDYYQPEQVQEQNGKVGSYVEMSTSVHSTEMVSVAWPTEGGDDLSYTQTSGALV
VFFSLRVTNMMFSEDLFNKNSLEYKALEQRFLELLVPYLQSNLTGFQNLEILNFRNGSIV
VNSRMKFANSVPPNVNNAVYMILEDFCTTAYNTMNLAIDKYSLDVESGDEANPCKFQACN
EFSECLVNPWSGEAKCRCFPGYLSVEERPCQSLCDLQPDFCLNDGKCDIMPGHGAICRCR
VGENWWYRGKHCEEFVSEPVIIGITIASVVGLLVIFSAIIYFFIRTLQAHHDRSERESPF
SGSSRQPDSLSSIENAVKYNPVYESHRAGCEKYEGPYPQHPFYSSASGDVIGGLSREEIR
QMYESSELSREEIQERMRVLELYANDPEFAAFVREQQVEEV

Sequence length

1241

Interactions

View interactions

Show/Hide Causal Diseases (19)

Disease term	Disease name	dbSNP ID	References
Causal
Cataract	Cataract	rs118203965, rs118203966, rs104893685, rs121908938, rs104894175, rs121909048, rs28937573, rs121909049, rs121909050, rs74315488, rs80358200, rs80358203, rs121434643, rs56141211, rs132630322 View all (150 more)
Choroideremia	Choroideremia	rs132630263, rs132630264, rs132630265, rs587776746, rs132630267, rs132630266, rs397514603, rs386833676, rs281865373, rs527236048, rs786204761, rs886041179, rs886041177, rs776256380, rs1057516265 View all (20 more)
Diabetes mellitus	Diabetes Mellitus, Non-Insulin-Dependent	rs587776515, rs61730328, rs606231121, rs606231122, rs79020217, rs77625743, rs78378398, rs606231123, rs1362648752, rs104893649, rs80356624, rs80356616, rs80356625, rs80356611, rs104894237 View all (293 more)
Foveomacular vitelliform dystrophy	Adult-onset foveomacular vitelliform dystrophy	rs61755801, rs61748430, rs1554269071, rs1562434117
Glaucoma	Glaucoma	rs121918355, rs1566660365, rs1566635134, rs121918356, rs1566634475, rs28936700, rs55771538, rs28936701, rs104893622, rs55989760, rs72549387, rs104893628, rs2125316417, rs104893629, rs74315328 View all (29 more)
Hearing loss	Conductive hearing loss, Sensorineural Hearing Loss (disorder)	rs267607135, rs267606855, rs779841884, rs267606854, rs28942097, rs121908073, rs121908076, rs74315289, rs121908144, rs111033313, rs74315437, rs121908348, rs121908349, rs121908350, rs397515359 View all (184 more)
Hyperinsulinism	Hyperinsulinism	rs387906407, rs151344623, rs121913156, rs137853245, rs80356655, rs104894010, rs104894012, rs104894014, rs104894015, rs137852676, rs587783169, rs72559716, rs541269678, rs151344624, rs797045209 View all (23 more)
Inflammatory bowel disease	Inflammatory Bowel Diseases	rs137853579, rs137853580, rs121909601, rs149491038, rs368287711, rs387907326, rs587777338, rs758439420, rs1329427406, rs1264862631, rs1192830343, rs1373354533, rs1419560997, rs1591263883, rs1989014468	28067908
Keratoconus	Keratoconus	rs273585637, rs273585632, rs273585616, rs273585618, rs281865144, rs281865150, rs1553500862, rs756938019
Age-related macular degeneration	Age related macular degeneration	rs199474657, rs61750120, rs1800728, rs62654397, rs61749423, rs61751412, rs61749439, rs61751398, rs61752417, rs62645946, rs1801269, rs62646860, rs61750142, rs61750145, rs61750152 View all (20 more)
Macular dystrophy	Macular dystrophy	rs80338903, rs267606875, rs137853006, rs62635654, rs104893967, rs61755793, rs62625014, rs724159985, rs398122391, rs1800728, rs61755810, rs61755814, rs61748556, rs61751263, rs61751402 View all (42 more)	30718709
Mental retardation	Intellectual Disability	rs5742905, rs267607136, rs267607137, rs2131714307, rs267607038, rs267607042, rs80338685, rs137853127, rs80338815, rs28940893, rs387906309, rs121908096, rs121908099, rs587784365, rs121918315 View all (1024 more)
Nystagmus	Nystagmus	rs137852207, rs137852208, rs1928435502, rs137852209, rs137852210, rs1929191668, rs137852211, rs137852212, rs2124209414, rs387906720, rs387906721, rs1602791884, rs786205896
Obesity	Obesity	rs74315349, rs1474810899, rs121918111, rs796065034, rs753856820, rs796065035, rs121918112, rs104894023, rs137852821, rs1580764441, rs137852822, rs137852823, rs137852824, rs13447324, rs121913562 View all (27 more)
Optic atrophy	Optic Atrophy	rs121434508, rs267607017, rs80356524, rs80356525, rs879255560, rs104893753, rs80356529, rs397515360, rs104893620, rs199476104, rs199476112, rs199476118, rs398124298, rs770066665, rs398124299 View all (37 more)
Retinal dystrophy	Retinal Dystrophies	rs267606794, rs200691042, rs397704718, rs202193201, rs794728002, rs121965036, rs121965057, rs121918129, rs137853190, rs386834252, rs121918165, rs137853113, rs137853114, rs121918328, rs587777803 View all (2328 more)	20673862
Retinitis pigmentosa	Retinitis Pigmentosa, RETINITIS PIGMENTOSA 56, Retinitis pigmentosa	rs267606794, rs200691042, rs397704718, rs202193201, rs267606793, rs2147483647, rs779886453, rs267606691, rs794728002, rs878853253, rs137853189, rs137853190, rs137853112, rs137853113, rs137853114 View all (1830 more)
Rod-cone dystrophy	Rod-Cone Dystrophy	rs267606641, rs199476133, rs193302849, rs777668842, rs775518991, rs752300607, rs142759730, rs756225251, rs536742386, rs1588830568, rs778907433
Vitelliform macular dystrophy	Vitelliform Macular Dystrophy, Adult-Onset Vitelliform Macular Dystrophy, Juvenile-Onset Vitelliform Macular Dystrophy	rs28940273, rs28940274, rs28941468, rs121918285, rs28941469, rs28940275, rs121918283, rs28940276, rs1800995, rs28940570, rs28940278, rs281865528, rs121918284, rs267606677, rs61755793 View all (62 more)	25085631

Show/Hide Unknown Diseases (7)

Disease term	Disease name	References	Source
Unknown
Crohn disease	Crohn Disease	28067908	ClinVar
Vitelliform Macular Dystrophy	vitelliform macular dystrophy 5		GenCC
Retinal Dystrophy	inherited retinal dystrophy		GenCC
Retinitis Pigmentosa	retinitis pigmentosa, retinitis pigmentosa 56		GenCC
Foveomacular Vitelliform Dystrophy	adult-onset foveomacular vitelliform dystrophy		GenCC
Crohn Disease	Crohn Disease		GWAS
Inflammatory Bowel Disease	Inflammatory Bowel Disease		GWAS

Show/Hide Text Mining Associations (7)

Disease Name	Relationship Type	References
Associations from Text Mining
Hearing Loss Bilateral	Associate	35608844
Retinal Diseases	Associate	24876279
Retinal Dystrophies	Associate	37127645, 39596324
Retinitis Pigmentosa	Associate	24339724, 24876279
Sveinsson Chorioretinal Atrophy	Associate	24876279
Vision Disorders	Associate	24876279, 35608844
Vitelliform Macular Dystrophy	Associate	35608844, 35900727

IMPG2 (interphotoreceptor matrix proteoglycan 2)