Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
5037
Gene name Gene Name - the full gene name approved by the HGNC.
Phosphatidylethanolamine binding protein 1
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
PEBP1
Synonyms (NCBI Gene) Gene synonyms aliases
HCNP, HCNPpp, HEL-210, HEL-S-34, HEL-S-96, PBP, PEBP, PEBP-1, RKIP
Chromosome Chromosome number
12
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
12q24.23
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a member of the phosphatidylethanolamine-binding family of proteins and has been shown to modulate multiple signaling pathways, including the MAP kinase (MAPK), NF-kappa B, and glycogen synthase kinase-3 (GSK-3) signaling pathways. The e
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT007008 hsa-miR-224-5p Luciferase reporter assay 22809510
MIRT007008 hsa-miR-224-5p Luciferase reporter assay 22809510
MIRT019828 hsa-miR-375 Microarray 20215506
MIRT020686 hsa-miR-155-5p Proteomics 18668040
MIRT049454 hsa-miR-92a-3p CLASH 23622248
Transcription factors
Transcription factor Regulation Reference
AR Unknown 23095933
EZH2 Repression 22505648
SNAI1 Repression 18477483;19538137
SPI1 Activation 9334192
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000165 Process MAPK cascade TAS
GO:0003723 Function RNA binding HDA 22658674
GO:0004867 Function Serine-type endopeptidase inhibitor activity IEA
GO:0005515 Function Protein binding IPI 17097642, 21831839, 30337686, 31980649, 32296183
GO:0005524 Function ATP binding IEA
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
604591 8630 ENSG00000089220
Protein
UniProt ID P30086
Protein name Phosphatidylethanolamine-binding protein 1 (PEBP-1) (HCNPpp) (Neuropolypeptide h3) (Prostatic-binding protein) (Raf kinase inhibitor protein) (RKIP) [Cleaved into: Hippocampal cholinergic neurostimulating peptide (HCNP)]
Protein function Binds ATP, opioids and phosphatidylethanolamine. Has lower affinity for phosphatidylinositol and phosphatidylcholine. Serine protease inhibitor which inhibits thrombin, neuropsin and chymotrypsin but not trypsin, tissue type plasminogen activato
PDB 1BD9 , 1BEH , 2L7W , 2QYQ
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01161 PBP 25 169 Phosphatidylethanolamine-binding protein Domain
Sequence
Sequence length 187
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    MAP2K and MAPK activation
Negative regulation of MAPK pathway
Signaling by moderate kinase activity BRAF mutants
Signaling by high-kinase activity BRAF mutants
Signaling by BRAF and RAF fusions
Paradoxical activation of RAF signaling by kinase inactive BRAF
Signaling downstream of RAS mutants
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Carcinoma Carcinoma, Carcinoma, Spindle-Cell, Undifferentiated carcinoma rs121912654, rs555607708, rs786202962, rs1564055259 12376462
Papillary renal carcinoma Papillary Renal Cell Carcinoma rs5030823, rs2137087134, rs121913668, rs121913669, rs121913670, rs121913671, rs121913673, rs121913243, rs786202724 25329396
Renal carcinoma Renal Cell Carcinoma, Conventional (Clear Cell) Renal Cell Carcinoma, Sarcomatoid Renal Cell Carcinoma, Collecting Duct Carcinoma of the Kidney rs121913668, rs121913670, rs121913243, rs786202724 25329396
Unknown
Disease term Disease name Evidence References Source
Chromophobe carcinoma Chromophobe Renal Cell Carcinoma 25329396 ClinVar
Congestive heart failure Congestive heart failure 26670611 ClinVar
Heart failure Heart failure, Left-Sided Heart Failure, Heart Failure, Right-Sided 26670611 ClinVar
Myocardial infarction Myocardial Failure 26670611 ClinVar
Associations from Text Mining
Disease Name Relationship Type References
Alzheimer Disease Associate 18752637
Ascites Associate 18652693
Atherosclerosis Associate 40708018
Breast Neoplasms Associate 14766752, 24395801, 24420151, 37963558
Calcinosis Cutis Inhibit 21672326
Calcinosis Cutis Associate 23632477
Carcinogenesis Associate 26177829
Carcinoma Hepatocellular Inhibit 17030190
Carcinoma Hepatocellular Associate 27902472, 28071612, 29990987, 33307168
Carcinoma Merkel Cell Associate 16498399