Gene Gene information from NCBI Gene database.
Entrez ID 4929
Gene name Nuclear receptor subfamily 4 group A member 2
Gene symbol NR4A2
Synonyms (NCBI Gene)
HZF-3IDLDPNOTNURR1RNR1TINUR
Chromosome 2
Chromosome location 2q24.1
Summary This gene encodes a member of the steroid-thyroid hormone-retinoid receptor superfamily. The encoded protein may act as a transcription factor. Mutations in this gene have been associated with disorders related to dopaminergic dysfunction, including Parki
SNPs SNP information provided by dbSNP.
2
SNP ID Visualize variation Clinical significance Consequence
rs1553456695 ->C Likely-pathogenic Non coding transcript variant, frameshift variant, coding sequence variant
rs1573811478 ->GTCG Likely-pathogenic Coding sequence variant, non coding transcript variant, frameshift variant
miRNA miRNA information provided by mirtarbase database.
232
miRTarBase ID miRNA Experiments Reference
MIRT003538 hsa-miR-372-3p Luciferase reporter assayMicroarray 19885849
MIRT003538 hsa-miR-372-3p Luciferase reporter assayMicroarray 19885849
MIRT003537 hsa-miR-302d-3p Luciferase reporter assayMicroarray 19885849
MIRT003537 hsa-miR-302d-3p Luciferase reporter assayMicroarray 19885849
MIRT003537 hsa-miR-302d-3p Luciferase reporter assayMicroarray 19885849
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
80
GO ID Ontology Definition Evidence Reference
GO:0000122 Process Negative regulation of transcription by RNA polymerase II IMP 18463503
GO:0000122 Process Negative regulation of transcription by RNA polymerase II TAS 22988876
GO:0000785 Component Chromatin ISA
GO:0000977 Function RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
GO:0000978 Function RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
601828 7981 ENSG00000153234
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P43354
Protein name Nuclear receptor subfamily 4 group A member 2 (Immediate-early response protein NOT) (Orphan nuclear receptor NURR1) (Transcriptionally-inducible nuclear receptor)
Protein function Transcriptional regulator which is important for the differentiation and maintenance of meso-diencephalic dopaminergic (mdDA) neurons during development (PubMed:15716272, PubMed:17184956). It is crucial for expression of a set of genes such as S
PDB 1OVL , 5Y41 , 5YD6 , 6DDA , 6L6L , 6L6Q , 7WNH , 8CYO
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00105 zf-C4 261 330 Zinc finger, C4 type (two domains) Domain
PF00104 Hormone_recep 392 579 Ligand-binding domain of nuclear hormone receptor Domain
Tissue specificity TISSUE SPECIFICITY: Expressed in a number of cell lines of T-cell, B-cell and fibroblast origin. Strong expression in brain tissue.
Sequence
MPCVQAQYGSSPQGASPASQSYSYHSSGEYSSDFLTPEFVKFSMDLTNTEITATTSLPSF
STFMDNYSTGYDVKPPCLYQMPLSGQQSSIKVEDIQMHNYQQHSHLPPQSEEMMPHSGSV
YYKPSSPPTPTTPGFQVQHSPMWDDPGSLHNFHQNYVATTHMIEQRKTPVSRLSLFSFKQ
SPPGTPVSSCQMRFDGPLHVPMNPEPAGSHHVVDGQTFAVPNPIRKPASMGFPGLQIGHA
SQLLDTQVPSPPSRGSPSNEGLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCL
ANKNCPVDKRRRNRCQYCRFQKCLAVGMVK
EVVRTDSLKGRRGRLPSKPKSPQEPSPPSP
PVSLISALVRAHVDSNPAMTSLDYSRFQANPDYQMSGDDTQHIQQFYDLLTGSMEIIRGW
AEKIPGFADLPKADQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGVVLHRLQCVRGFG
EWIDSIVEFSSNLQNMNIDISAFSCIAALAMVTERHGLKEPKRVEELQNKIVNCLKDHVT
FNNGGLNRPNYLSKLLGKLPELRTLCTQGLQRIFYLKLE
DLVPPPAIIDKLFLDTLPF
Sequence length 598
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Aldosterone synthesis and secretion
Parathyroid hormone synthesis, secretion and action
  Nuclear Receptor transcription pathway
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
87
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Autism spectrum disorder Likely pathogenic rs1686821540 RCV001291378
Complex neurodevelopmental disorder Likely pathogenic rs2468285722 RCV002795916
Developmental disorder Likely pathogenic rs2468272048 RCV003127337
Epilepsy Likely pathogenic rs1553456695 RCV000656523
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Autism Benign rs797046133 RCV000195213
History of neurodevelopmental disorder not provided rs2105591753 RCV001825194
NR4A2-related disorder Conflicting classifications of pathogenicity; Uncertain significance; Benign; Likely benign rs143618355, rs375203930, rs2468286647, rs16840266, rs957572776 RCV003903636
RCV003416786
RCV003414481
RCV003922420
RCV003981823
Parkinson Disease, Dominant/Recessive Conflicting classifications of pathogenicity; Benign; Uncertain significance rs577936871, rs3832066, rs886054983 RCV000280528
RCV000331043
RCV000388031
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Alcoholism Associate 23066323
Alzheimer Disease Inhibit 16320253
Arthritis Associate 11315917, 34248958
Arthritis Psoriatic Associate 11315917
Arthritis Rheumatoid Associate 11315917, 35508128
Arthritis Rheumatoid Stimulate 22275273
Atherosclerosis Associate 34248958
Attention Deficit Disorder with Hyperactivity Associate 22294735
Autism Spectrum Disorder Associate 27569545, 30504930
Autistic Disorder Associate 30504930