Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
4830
Gene name Gene Name - the full gene name approved by the HGNC.
NME/NM23 nucleoside diphosphate kinase 1
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
NME1
Synonyms (NCBI Gene) Gene synonyms aliases
AWD, GAAD, NB, NBS, NDKA, NDPK-A, NDPKA, NM23, NM23-H1
Disease Acronyms (UniProt) Disease acronyms from UniProt database
NBS
Chromosome Chromosome number
17
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
17q21.33
Summary Summary of gene provided in NCBI Entrez Gene.
This gene (NME1) was identified because of its reduced mRNA transcript levels in highly metastatic cells. Nucleoside diphosphate kinase (NDK) exists as a hexamer composed of `A` (encoded by this gene) and `B` (encoded by NME2) isoforms. Mutations in this
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT1187500 hsa-miR-1193 CLIP-seq
MIRT1187501 hsa-miR-1245b-3p CLIP-seq
MIRT1187502 hsa-miR-1272 CLIP-seq
MIRT1187503 hsa-miR-1322 CLIP-seq
MIRT1187504 hsa-miR-141 CLIP-seq
Transcription factors
Transcription factor Regulation Reference
STAT3 Activation 23583378
TP53 Unknown 12669312
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000287 Function Magnesium ion binding IDA 11555662
GO:0000977 Function RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
GO:0002762 Process Negative regulation of myeloid leukocyte differentiation IEA
GO:0003697 Function Single-stranded DNA binding IEA
GO:0003723 Function RNA binding HDA 22658674
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
156490 7849 ENSG00000239672
Protein
UniProt ID P15531
Protein name Nucleoside diphosphate kinase A (NDK A) (NDP kinase A) (EC 2.7.4.6) (Granzyme A-activated DNase) (GAAD) (Metastasis inhibition factor nm23) (NM23-H1) (Tumor metastatic process-associated protein)
Protein function Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. Possesses nucleoside-diphosphate
PDB 1JXV , 1UCN , 2HVD , 2HVE , 3L7U , 4ENO , 5UI4 , 8OOV
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00334 NDK 5 139 Nucleoside diphosphate kinase Domain
Tissue specificity TISSUE SPECIFICITY: Isoform 1 is expressed in heart, brain, placenta, lung, liver, skeletal muscle, pancreas, spleen and thymus. Expressed in lung carcinoma cell lines but not in normal lung tissues. Isoform 2 is ubiquitously expressed and its expression
Sequence
Sequence length 152
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Purine metabolism
Pyrimidine metabolism
Drug metabolism - other enzymes
Metabolic pathways
Nucleotide metabolism
Biosynthesis of cofactors
  Interconversion of nucleotide di- and triphosphates
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Colorectal cancer Colorectal Carcinoma rs137854568, rs137854573, rs137854575, rs387906234, rs121908380, rs121908702, rs267606674, rs794729661, rs121909055, rs281865417, rs267606884, rs28934575, rs587776769, rs104893815, rs587776800
View all (467 more)
15814641
Colorectal neoplasms Colorectal Neoplasms rs28929483, rs63751108, rs28929484, rs63749831, rs63750047, rs63751207, rs63749811, rs1553350126, rs63750875, rs63750955, rs587776706, rs63750871, rs587776715, rs63751466, rs63750049
View all (1682 more)
15814641
Hypertrophic cardiomyopathy Hypertrophic Cardiomyopathy, Hypertrophic obstructive cardiomyopathy rs63750743, rs104894655, rs121908987, rs587776643, rs28938173, rs121908989, rs121908991, rs267606977, rs267606978, rs193922384, rs121909374, rs886041030, rs886041031, rs121909375, rs121909377
View all (752 more)
9527842
Unknown
Disease term Disease name Evidence References Source
Myocardial Infarction Myocardial Infarction GWAS
Associations from Text Mining
Disease Name Relationship Type References
Adenocarcinoma Associate 1325827, 9823779
Adenocarcinoma Stimulate 15334673
Adenocarcinoma Follicular Associate 25048347
Adenocarcinoma of Lung Associate 29522283, 32795291, 7928630
Adenoma Stimulate 27222072
Adenomatous Polyps Associate 17278192
Allan Herndon Dudley syndrome Stimulate 9555115
Alzheimer Disease Associate 25311278, 30268934, 36142676
Arthritis Rheumatoid Inhibit 8660103
Asthma Associate 39217320