Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene information from NCBI Gene database. Gene SNPs miRNA Gene ontology Other IDs Protein Associated diseases
Entrez ID	4784
Gene name	Nuclear factor I X
Gene symbol	NFIX
Synonyms (NCBI Gene)	CTFMALNSMRSHSSNF-I/XNF1-XNF1ASOTOS2
Chromosome	19
Chromosome location	19p13.13
Summary	The protein encoded by this gene is a transcription factor that binds the palindromic sequence 5`-TTGGCNNNNNGCCAA-3 in viral and cellular promoters. The encoded protein can also stimulate adenovirus replication in vitro. Three transcript variants encoding

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SNP ID	Visualize variation	Clinical significance	Consequence
rs387907253	C>T	Pathogenic	Stop gained, coding sequence variant
rs387907254	T>C	Pathogenic	Coding sequence variant, missense variant
rs387907255	G>C	Pathogenic	Coding sequence variant, missense variant
rs398122869	TC>-	Pathogenic	Coding sequence variant, frameshift variant, intron variant
rs398122870	->T	Pathogenic	Coding sequence variant, frameshift variant, intron variant
rs398122871	CTCTC>-	Pathogenic	Coding sequence variant, frameshift variant, intron variant
rs398122872	->C	Pathogenic	Coding sequence variant, frameshift variant, intron variant
rs398122873	G>-	Pathogenic	Coding sequence variant, frameshift variant
rs398122874	->T	Pathogenic	Coding sequence variant, frameshift variant, intron variant
rs398122875	->C	Pathogenic	Coding sequence variant, frameshift variant, intron variant
rs398122876	G>A,T	Pathogenic	Splice donor variant
rs587779381	C>G	Pathogenic	Stop gained, coding sequence variant
rs786205515	G>T	Pathogenic	Coding sequence variant, stop gained
rs797044911	C>T	Pathogenic	Missense variant, coding sequence variant
rs797045056	->AGATC	Pathogenic	Frameshift variant, coding sequence variant
rs797045737	GAGCCCCCGGGCCACAG>-	Pathogenic	Frameshift variant, coding sequence variant
rs797045738	AA>-	Pathogenic	Frameshift variant, intron variant, coding sequence variant
rs886039698	ATGCA>-	Pathogenic	Frameshift variant, coding sequence variant
rs886041304	C>-,CC	Pathogenic	Frameshift variant, coding sequence variant
rs886041422	C>T	Pathogenic	Coding sequence variant, stop gained
rs886041432	->C	Pathogenic	Frameshift variant, coding sequence variant
rs886041647	->C	Pathogenic	Frameshift variant, coding sequence variant
rs886041792	G>A	Pathogenic	Coding sequence variant, stop gained
rs886041828	C>-	Pathogenic	Frameshift variant, coding sequence variant
rs1057517936	T>G	Likely-pathogenic	Coding sequence variant, missense variant
rs1057518152	G>A	Pathogenic	Splice donor variant
rs1064796288	GG>C	Pathogenic	Coding sequence variant, frameshift variant
rs1085307714	G>-	Pathogenic	Coding sequence variant, splice acceptor variant
rs1135401802	G>-	Pathogenic	Coding sequence variant, 5 prime UTR variant, frameshift variant
rs1555696499	G>T	Likely-pathogenic	Coding sequence variant, stop gained
rs1555696536	->TC	Likely-pathogenic	Frameshift variant, coding sequence variant
rs1555696587	->C	Pathogenic	Frameshift variant, coding sequence variant
rs1555696597	A>G	Likely-pathogenic	Coding sequence variant, missense variant
rs1555696603	C>T	Likely-pathogenic	Coding sequence variant, missense variant
rs1555696606	G>A,C	Likely-pathogenic, likely-benign	Coding sequence variant, synonymous variant
rs1555696611	C>-	Pathogenic	Frameshift variant, coding sequence variant
rs1555696625	G>A	Pathogenic	Coding sequence variant, missense variant
rs1555696641	G>C	Likely-pathogenic	Coding sequence variant, missense variant
rs1555696660	A>G	Likely-pathogenic	Coding sequence variant, missense variant
rs1555705276	C>T	Pathogenic	Coding sequence variant, stop gained
rs1555705733	->C	Pathogenic	Frameshift variant, coding sequence variant
rs1555707363	C>-	Pathogenic	Frameshift variant, coding sequence variant
rs1568268397	A>T	Pathogenic	Coding sequence variant, stop gained, 5 prime UTR variant
rs1568269273	G>A	Likely-pathogenic	Coding sequence variant, missense variant
rs1568318540	C>-	Likely-pathogenic	Frameshift variant, coding sequence variant
rs1568318932	T>C,G	Likely-pathogenic	Splice donor variant
rs1599737421	->TTCATCG	Pathogenic	Frameshift variant, coding sequence variant, 5 prime UTR variant
rs1599737896	->T	Pathogenic	Frameshift variant, coding sequence variant
rs1599738036	A>T	Pathogenic	Coding sequence variant, stop gained
rs1599738349	CCAGAAGGGCAAGA>-	Pathogenic	Frameshift variant, coding sequence variant
rs1599738398	G>A	Likely-pathogenic	Coding sequence variant, missense variant
rs1599738608	->C	Pathogenic	Frameshift variant, coding sequence variant
rs1599844887	ACCTCCCCTCCTTC>-	Pathogenic	Frameshift variant, coding sequence variant
rs1599848690	GTGGCCCAACG>-	Pathogenic	Frameshift variant, coding sequence variant
rs1599855670	AG>-	Pathogenic	Intron variant, coding sequence variant, frameshift variant
rs1599862139	->CCAGCAG	Pathogenic	Frameshift variant, coding sequence variant
rs1599862357	->G	Pathogenic	Frameshift variant, coding sequence variant

604

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miRTarBase ID	miRNA	Experiments	Reference
MIRT004316	hsa-miR-223-3p	Luciferase reporter assay	19850724
MIRT023216	hsa-miR-124-3p	Proteomics;Microarray	18668037
MIRT045644	hsa-miR-149-5p	CLASH	23622248
MIRT043206	hsa-miR-324-5p	CLASH	23622248
MIRT610735	hsa-miR-6845-3p	HITS-CLIP	19536157
MIRT610734	hsa-miR-6873-3p	HITS-CLIP	19536157
MIRT610733	hsa-miR-4768-5p	HITS-CLIP	19536157
MIRT610732	hsa-miR-6833-3p	HITS-CLIP	19536157
MIRT610731	hsa-miR-6809-3p	HITS-CLIP	19536157
MIRT610735	hsa-miR-6845-3p	HITS-CLIP	23824327
MIRT610734	hsa-miR-6873-3p	HITS-CLIP	23824327
MIRT610733	hsa-miR-4768-5p	HITS-CLIP	23824327
MIRT610732	hsa-miR-6833-3p	HITS-CLIP	23824327
MIRT610731	hsa-miR-6809-3p	HITS-CLIP	23824327
MIRT610735	hsa-miR-6845-3p	HITS-CLIP	23824327
MIRT610734	hsa-miR-6873-3p	HITS-CLIP	23824327
MIRT610733	hsa-miR-4768-5p	HITS-CLIP	23824327
MIRT610732	hsa-miR-6833-3p	HITS-CLIP	23824327
MIRT610731	hsa-miR-6809-3p	HITS-CLIP	23824327
MIRT610735	hsa-miR-6845-3p	HITS-CLIP	23824327
MIRT610733	hsa-miR-4768-5p	HITS-CLIP	23824327
MIRT610732	hsa-miR-6833-3p	HITS-CLIP	23824327
MIRT610735	hsa-miR-6845-3p	HITS-CLIP	23824327
MIRT610734	hsa-miR-6873-3p	HITS-CLIP	23824327
MIRT610733	hsa-miR-4768-5p	HITS-CLIP	23824327
MIRT610732	hsa-miR-6833-3p	HITS-CLIP	23824327
MIRT610731	hsa-miR-6809-3p	HITS-CLIP	23824327
MIRT610735	hsa-miR-6845-3p	HITS-CLIP	23824327
MIRT610734	hsa-miR-6873-3p	HITS-CLIP	23824327
MIRT610733	hsa-miR-4768-5p	HITS-CLIP	23824327
MIRT610732	hsa-miR-6833-3p	HITS-CLIP	23824327
MIRT610731	hsa-miR-6809-3p	HITS-CLIP	23824327
MIRT610735	hsa-miR-6845-3p	HITS-CLIP	23824327
MIRT610734	hsa-miR-6873-3p	HITS-CLIP	23824327
MIRT610733	hsa-miR-4768-5p	HITS-CLIP	23824327
MIRT610732	hsa-miR-6833-3p	HITS-CLIP	23824327
MIRT610731	hsa-miR-6809-3p	HITS-CLIP	23824327
MIRT570602	hsa-miR-6801-3p	PAR-CLIP	20371350
MIRT570601	hsa-miR-6810-3p	PAR-CLIP	20371350
MIRT570599	hsa-miR-4734	PAR-CLIP	20371350
MIRT570598	hsa-miR-6846-3p	PAR-CLIP	20371350
MIRT574578	hsa-miR-3184-5p	PAR-CLIP	20371350
MIRT574579	hsa-miR-423-5p	PAR-CLIP	20371350
MIRT570595	hsa-miR-4706	PAR-CLIP	20371350
MIRT570594	hsa-miR-4749-5p	PAR-CLIP	20371350
MIRT570593	hsa-miR-744-5p	PAR-CLIP	20371350
MIRT492879	hsa-miR-149-3p	PAR-CLIP	20371350
MIRT492877	hsa-miR-4728-5p	PAR-CLIP	20371350
MIRT492876	hsa-miR-6785-5p	PAR-CLIP	20371350
MIRT492875	hsa-miR-6883-5p	PAR-CLIP	20371350
MIRT570592	hsa-miR-6781-5p	PAR-CLIP	20371350
MIRT570591	hsa-miR-3144-5p	PAR-CLIP	20371350
MIRT574577	hsa-miR-6825-5p	PAR-CLIP	20371350
MIRT570590	hsa-miR-128-1-5p	PAR-CLIP	20371350
MIRT570589	hsa-miR-128-2-5p	PAR-CLIP	20371350
MIRT492890	hsa-miR-212-5p	PAR-CLIP	20371350
MIRT492889	hsa-miR-4419a	PAR-CLIP	20371350
MIRT492888	hsa-miR-4510	PAR-CLIP	20371350
MIRT492887	hsa-miR-6127	PAR-CLIP	20371350
MIRT492885	hsa-miR-6129	PAR-CLIP	20371350
MIRT492886	hsa-miR-6130	PAR-CLIP	20371350
MIRT492884	hsa-miR-6133	PAR-CLIP	20371350
MIRT492883	hsa-miR-1249-5p	PAR-CLIP	20371350
MIRT492882	hsa-miR-6797-5p	PAR-CLIP	20371350
MIRT492881	hsa-miR-7150	PAR-CLIP	20371350
MIRT570602	hsa-miR-6801-3p	PAR-CLIP	20371350
MIRT570601	hsa-miR-6810-3p	PAR-CLIP	20371350
MIRT570600	hsa-miR-6752-3p	PAR-CLIP	20371350
MIRT570599	hsa-miR-4734	PAR-CLIP	20371350
MIRT570598	hsa-miR-6846-3p	PAR-CLIP	20371350
MIRT570597	hsa-miR-6869-3p	PAR-CLIP	20371350
MIRT570596	hsa-miR-3648	PAR-CLIP	20371350
MIRT570595	hsa-miR-4706	PAR-CLIP	20371350
MIRT570594	hsa-miR-4749-5p	PAR-CLIP	20371350
MIRT570593	hsa-miR-744-5p	PAR-CLIP	20371350
MIRT570592	hsa-miR-6781-5p	PAR-CLIP	20371350
MIRT570591	hsa-miR-3144-5p	PAR-CLIP	20371350
MIRT570590	hsa-miR-128-1-5p	PAR-CLIP	20371350
MIRT570589	hsa-miR-128-2-5p	PAR-CLIP	20371350
MIRT023216	hsa-miR-124-3p	PAR-CLIP	20371350
MIRT406559	hsa-miR-506-3p	PAR-CLIP	20371350
MIRT023216	hsa-miR-124-3p	PAR-CLIP	20371350
MIRT566641	hsa-miR-3714	PAR-CLIP	20371350
MIRT566640	hsa-miR-3910	PAR-CLIP	20371350
MIRT406564	hsa-miR-5582-5p	PAR-CLIP	20371350
MIRT406562	hsa-miR-4459	PAR-CLIP	20371350
MIRT406560	hsa-miR-765	PAR-CLIP	20371350
MIRT492892	hsa-miR-1321	PAR-CLIP	23592263
MIRT492893	hsa-miR-4739	PAR-CLIP	23592263
MIRT492891	hsa-miR-4756-5p	PAR-CLIP	23592263
MIRT492890	hsa-miR-212-5p	PAR-CLIP	23592263
MIRT492889	hsa-miR-4419a	PAR-CLIP	23592263
MIRT492888	hsa-miR-4510	PAR-CLIP	23592263
MIRT492887	hsa-miR-6127	PAR-CLIP	23592263
MIRT492885	hsa-miR-6129	PAR-CLIP	23592263
MIRT492886	hsa-miR-6130	PAR-CLIP	23592263
MIRT492884	hsa-miR-6133	PAR-CLIP	23592263
MIRT492883	hsa-miR-1249-5p	PAR-CLIP	23592263
MIRT492882	hsa-miR-6797-5p	PAR-CLIP	23592263
MIRT492881	hsa-miR-7150	PAR-CLIP	23592263
MIRT492880	hsa-miR-6804-5p	PAR-CLIP	23592263
MIRT492878	hsa-miR-6789-3p	PAR-CLIP	23592263
MIRT492879	hsa-miR-149-3p	PAR-CLIP	23592263
MIRT492877	hsa-miR-4728-5p	PAR-CLIP	23592263
MIRT492876	hsa-miR-6785-5p	PAR-CLIP	23592263
MIRT492875	hsa-miR-6883-5p	PAR-CLIP	23592263
MIRT492874	hsa-miR-1237-5p	PAR-CLIP	23592263
MIRT492873	hsa-miR-4488	PAR-CLIP	23592263
MIRT492872	hsa-miR-4697-5p	PAR-CLIP	23592263
MIRT492871	hsa-miR-328-5p	PAR-CLIP	23592263
MIRT492870	hsa-miR-6885-5p	PAR-CLIP	23592263
MIRT492869	hsa-miR-363-5p	PAR-CLIP	23592263
MIRT492868	hsa-miR-6745	PAR-CLIP	23592263
MIRT492866	hsa-miR-6756-5p	PAR-CLIP	23592263
MIRT492867	hsa-miR-6766-5p	PAR-CLIP	23592263
MIRT492865	hsa-miR-1293	PAR-CLIP	23592263
MIRT492864	hsa-miR-4483	PAR-CLIP	23592263
MIRT492863	hsa-miR-92a-2-5p	PAR-CLIP	23592263
MIRT492862	hsa-miR-6769a-5p	PAR-CLIP	23592263
MIRT492861	hsa-miR-6769b-5p	PAR-CLIP	23592263
MIRT492860	hsa-miR-6742-5p	PAR-CLIP	23592263
MIRT492859	hsa-miR-6748-5p	PAR-CLIP	23592263
MIRT023216	hsa-miR-124-3p	PAR-CLIP	26701625
MIRT492883	hsa-miR-1249-5p	PAR-CLIP	26701625
MIRT492883	hsa-miR-1249-5p	PAR-CLIP	26701625
MIRT574578	hsa-miR-3184-5p	PAR-CLIP	26701625
MIRT566641	hsa-miR-3714	PAR-CLIP	26701625
MIRT566640	hsa-miR-3910	PAR-CLIP	26701625
MIRT574579	hsa-miR-423-5p	PAR-CLIP	26701625
MIRT492889	hsa-miR-4419a	PAR-CLIP	26701625
MIRT492889	hsa-miR-4419a	PAR-CLIP	26701625
MIRT406562	hsa-miR-4459	PAR-CLIP	26701625
MIRT492888	hsa-miR-4510	PAR-CLIP	26701625
MIRT492888	hsa-miR-4510	PAR-CLIP	26701625
MIRT406559	hsa-miR-506-3p	PAR-CLIP	26701625
MIRT406564	hsa-miR-5582-5p	PAR-CLIP	26701625
MIRT492887	hsa-miR-6127	PAR-CLIP	26701625
MIRT492887	hsa-miR-6127	PAR-CLIP	26701625
MIRT492885	hsa-miR-6129	PAR-CLIP	26701625
MIRT492885	hsa-miR-6129	PAR-CLIP	26701625
MIRT492886	hsa-miR-6130	PAR-CLIP	26701625
MIRT492886	hsa-miR-6130	PAR-CLIP	26701625
MIRT492884	hsa-miR-6133	PAR-CLIP	26701625
MIRT492884	hsa-miR-6133	PAR-CLIP	26701625
MIRT492882	hsa-miR-6797-5p	PAR-CLIP	26701625
MIRT492882	hsa-miR-6797-5p	PAR-CLIP	26701625
MIRT406560	hsa-miR-765	PAR-CLIP	26701625
MIRT492863	hsa-miR-92a-2-5p	PAR-CLIP	26701625
MIRT610735	hsa-miR-6845-3p	HITS-CLIP	19536157
MIRT610734	hsa-miR-6873-3p	HITS-CLIP	19536157
MIRT610733	hsa-miR-4768-5p	HITS-CLIP	19536157
MIRT610732	hsa-miR-6833-3p	HITS-CLIP	19536157
MIRT610731	hsa-miR-6809-3p	HITS-CLIP	19536157
MIRT610735	hsa-miR-6845-3p	HITS-CLIP	23824327
MIRT610734	hsa-miR-6873-3p	HITS-CLIP	23824327
MIRT610733	hsa-miR-4768-5p	HITS-CLIP	23824327
MIRT610732	hsa-miR-6833-3p	HITS-CLIP	23824327
MIRT610731	hsa-miR-6809-3p	HITS-CLIP	23824327
MIRT610735	hsa-miR-6845-3p	HITS-CLIP	23824327
MIRT610734	hsa-miR-6873-3p	HITS-CLIP	23824327
MIRT610733	hsa-miR-4768-5p	HITS-CLIP	23824327
MIRT610732	hsa-miR-6833-3p	HITS-CLIP	23824327
MIRT610731	hsa-miR-6809-3p	HITS-CLIP	23824327
MIRT610735	hsa-miR-6845-3p	HITS-CLIP	23824327
MIRT610733	hsa-miR-4768-5p	HITS-CLIP	23824327
MIRT610732	hsa-miR-6833-3p	HITS-CLIP	23824327
MIRT610735	hsa-miR-6845-3p	HITS-CLIP	23824327
MIRT610734	hsa-miR-6873-3p	HITS-CLIP	23824327
MIRT610733	hsa-miR-4768-5p	HITS-CLIP	23824327
MIRT610732	hsa-miR-6833-3p	HITS-CLIP	23824327
MIRT610731	hsa-miR-6809-3p	HITS-CLIP	23824327
MIRT610735	hsa-miR-6845-3p	HITS-CLIP	23824327
MIRT610734	hsa-miR-6873-3p	HITS-CLIP	23824327
MIRT610733	hsa-miR-4768-5p	HITS-CLIP	23824327
MIRT610732	hsa-miR-6833-3p	HITS-CLIP	23824327
MIRT610731	hsa-miR-6809-3p	HITS-CLIP	23824327
MIRT610735	hsa-miR-6845-3p	HITS-CLIP	23824327
MIRT610734	hsa-miR-6873-3p	HITS-CLIP	23824327
MIRT610733	hsa-miR-4768-5p	HITS-CLIP	23824327
MIRT610732	hsa-miR-6833-3p	HITS-CLIP	23824327
MIRT610731	hsa-miR-6809-3p	HITS-CLIP	23824327
MIRT570602	hsa-miR-6801-3p	PAR-CLIP	20371350
MIRT570601	hsa-miR-6810-3p	PAR-CLIP	20371350
MIRT570599	hsa-miR-4734	PAR-CLIP	20371350
MIRT570598	hsa-miR-6846-3p	PAR-CLIP	20371350
MIRT574578	hsa-miR-3184-5p	PAR-CLIP	20371350
MIRT574579	hsa-miR-423-5p	PAR-CLIP	20371350
MIRT570595	hsa-miR-4706	PAR-CLIP	20371350
MIRT570594	hsa-miR-4749-5p	PAR-CLIP	20371350
MIRT570593	hsa-miR-744-5p	PAR-CLIP	20371350
MIRT492879	hsa-miR-149-3p	PAR-CLIP	20371350
MIRT492877	hsa-miR-4728-5p	PAR-CLIP	20371350
MIRT492876	hsa-miR-6785-5p	PAR-CLIP	20371350
MIRT492875	hsa-miR-6883-5p	PAR-CLIP	20371350
MIRT570592	hsa-miR-6781-5p	PAR-CLIP	20371350
MIRT570591	hsa-miR-3144-5p	PAR-CLIP	20371350
MIRT574577	hsa-miR-6825-5p	PAR-CLIP	20371350
MIRT570590	hsa-miR-128-1-5p	PAR-CLIP	20371350
MIRT570589	hsa-miR-128-2-5p	PAR-CLIP	20371350
MIRT492890	hsa-miR-212-5p	PAR-CLIP	20371350
MIRT492889	hsa-miR-4419a	PAR-CLIP	20371350
MIRT492888	hsa-miR-4510	PAR-CLIP	20371350
MIRT492887	hsa-miR-6127	PAR-CLIP	20371350
MIRT492885	hsa-miR-6129	PAR-CLIP	20371350
MIRT492886	hsa-miR-6130	PAR-CLIP	20371350
MIRT492884	hsa-miR-6133	PAR-CLIP	20371350
MIRT492883	hsa-miR-1249-5p	PAR-CLIP	20371350
MIRT492882	hsa-miR-6797-5p	PAR-CLIP	20371350
MIRT492881	hsa-miR-7150	PAR-CLIP	20371350
MIRT570602	hsa-miR-6801-3p	PAR-CLIP	20371350
MIRT570601	hsa-miR-6810-3p	PAR-CLIP	20371350
MIRT570600	hsa-miR-6752-3p	PAR-CLIP	20371350
MIRT570599	hsa-miR-4734	PAR-CLIP	20371350
MIRT570598	hsa-miR-6846-3p	PAR-CLIP	20371350
MIRT570597	hsa-miR-6869-3p	PAR-CLIP	20371350
MIRT570596	hsa-miR-3648	PAR-CLIP	20371350
MIRT570595	hsa-miR-4706	PAR-CLIP	20371350
MIRT570594	hsa-miR-4749-5p	PAR-CLIP	20371350
MIRT570593	hsa-miR-744-5p	PAR-CLIP	20371350
MIRT570592	hsa-miR-6781-5p	PAR-CLIP	20371350
MIRT570591	hsa-miR-3144-5p	PAR-CLIP	20371350
MIRT570590	hsa-miR-128-1-5p	PAR-CLIP	20371350
MIRT570589	hsa-miR-128-2-5p	PAR-CLIP	20371350
MIRT023216	hsa-miR-124-3p	PAR-CLIP	20371350
MIRT406559	hsa-miR-506-3p	PAR-CLIP	20371350
MIRT023216	hsa-miR-124-3p	PAR-CLIP	20371350
MIRT566641	hsa-miR-3714	PAR-CLIP	20371350
MIRT566640	hsa-miR-3910	PAR-CLIP	20371350
MIRT406564	hsa-miR-5582-5p	PAR-CLIP	20371350
MIRT406562	hsa-miR-4459	PAR-CLIP	20371350
MIRT406560	hsa-miR-765	PAR-CLIP	20371350
MIRT492892	hsa-miR-1321	PAR-CLIP	23592263
MIRT492893	hsa-miR-4739	PAR-CLIP	23592263
MIRT492891	hsa-miR-4756-5p	PAR-CLIP	23592263
MIRT492890	hsa-miR-212-5p	PAR-CLIP	23592263
MIRT492889	hsa-miR-4419a	PAR-CLIP	23592263
MIRT492888	hsa-miR-4510	PAR-CLIP	23592263
MIRT492887	hsa-miR-6127	PAR-CLIP	23592263
MIRT492885	hsa-miR-6129	PAR-CLIP	23592263
MIRT492886	hsa-miR-6130	PAR-CLIP	23592263
MIRT492884	hsa-miR-6133	PAR-CLIP	23592263
MIRT492883	hsa-miR-1249-5p	PAR-CLIP	23592263
MIRT492882	hsa-miR-6797-5p	PAR-CLIP	23592263
MIRT492881	hsa-miR-7150	PAR-CLIP	23592263
MIRT492880	hsa-miR-6804-5p	PAR-CLIP	23592263
MIRT492878	hsa-miR-6789-3p	PAR-CLIP	23592263
MIRT492879	hsa-miR-149-3p	PAR-CLIP	23592263
MIRT492877	hsa-miR-4728-5p	PAR-CLIP	23592263
MIRT492876	hsa-miR-6785-5p	PAR-CLIP	23592263
MIRT492875	hsa-miR-6883-5p	PAR-CLIP	23592263
MIRT492874	hsa-miR-1237-5p	PAR-CLIP	23592263
MIRT492873	hsa-miR-4488	PAR-CLIP	23592263
MIRT492872	hsa-miR-4697-5p	PAR-CLIP	23592263
MIRT492871	hsa-miR-328-5p	PAR-CLIP	23592263
MIRT492870	hsa-miR-6885-5p	PAR-CLIP	23592263
MIRT492869	hsa-miR-363-5p	PAR-CLIP	23592263
MIRT492868	hsa-miR-6745	PAR-CLIP	23592263
MIRT492866	hsa-miR-6756-5p	PAR-CLIP	23592263
MIRT492867	hsa-miR-6766-5p	PAR-CLIP	23592263
MIRT492865	hsa-miR-1293	PAR-CLIP	23592263
MIRT492864	hsa-miR-4483	PAR-CLIP	23592263
MIRT492863	hsa-miR-92a-2-5p	PAR-CLIP	23592263
MIRT492862	hsa-miR-6769a-5p	PAR-CLIP	23592263
MIRT492861	hsa-miR-6769b-5p	PAR-CLIP	23592263
MIRT492860	hsa-miR-6742-5p	PAR-CLIP	23592263
MIRT492859	hsa-miR-6748-5p	PAR-CLIP	23592263
MIRT1183280	hsa-miR-1236	CLIP-seq
MIRT1183281	hsa-miR-1247	CLIP-seq
MIRT1183282	hsa-miR-1254	CLIP-seq
MIRT1183283	hsa-miR-1255a	CLIP-seq
MIRT1183284	hsa-miR-1255b	CLIP-seq
MIRT1183285	hsa-miR-1265	CLIP-seq
MIRT1183286	hsa-miR-1266	CLIP-seq
MIRT1183287	hsa-miR-1276	CLIP-seq
MIRT1183288	hsa-miR-1302	CLIP-seq
MIRT1183289	hsa-miR-1324	CLIP-seq
MIRT1183290	hsa-miR-136	CLIP-seq
MIRT1183291	hsa-miR-1470	CLIP-seq
MIRT1183292	hsa-miR-1538	CLIP-seq
MIRT1183293	hsa-miR-185	CLIP-seq
MIRT1183294	hsa-miR-1908	CLIP-seq
MIRT1183295	hsa-miR-2277-5p	CLIP-seq
MIRT1183296	hsa-miR-2392	CLIP-seq
MIRT1183297	hsa-miR-23a	CLIP-seq
MIRT1183298	hsa-miR-23b	CLIP-seq
MIRT1183299	hsa-miR-23c	CLIP-seq
MIRT1183300	hsa-miR-29a	CLIP-seq
MIRT1183301	hsa-miR-29b	CLIP-seq
MIRT1183302	hsa-miR-29c	CLIP-seq
MIRT1183303	hsa-miR-3116	CLIP-seq
MIRT1183304	hsa-miR-3126-5p	CLIP-seq
MIRT1183305	hsa-miR-3136-3p	CLIP-seq
MIRT1183306	hsa-miR-3143	CLIP-seq
MIRT1183307	hsa-miR-3153	CLIP-seq
MIRT1183308	hsa-miR-3175	CLIP-seq
MIRT1183309	hsa-miR-3180	CLIP-seq
MIRT1183310	hsa-miR-3180-3p	CLIP-seq
MIRT1183311	hsa-miR-3184	CLIP-seq
MIRT1183312	hsa-miR-3189-5p	CLIP-seq
MIRT1183313	hsa-miR-3192	CLIP-seq
MIRT1183314	hsa-miR-3195	CLIP-seq
MIRT1183315	hsa-miR-3196	CLIP-seq
MIRT1183316	hsa-miR-323-3p	CLIP-seq
MIRT1183317	hsa-miR-342-5p	CLIP-seq
MIRT1183318	hsa-miR-3612	CLIP-seq
MIRT1183319	hsa-miR-3617	CLIP-seq
MIRT1183320	hsa-miR-365	CLIP-seq
MIRT1183321	hsa-miR-3653	CLIP-seq
MIRT1183322	hsa-miR-3656	CLIP-seq
MIRT1183323	hsa-miR-3667-5p	CLIP-seq
MIRT1183324	hsa-miR-3677-5p	CLIP-seq
MIRT1183325	hsa-miR-374a	CLIP-seq
MIRT1183326	hsa-miR-374b	CLIP-seq
MIRT1183327	hsa-miR-3919	CLIP-seq
MIRT1183328	hsa-miR-409-3p	CLIP-seq
MIRT1183329	hsa-miR-4269	CLIP-seq
MIRT1183330	hsa-miR-4293	CLIP-seq
MIRT1183331	hsa-miR-4298	CLIP-seq
MIRT1183332	hsa-miR-4306	CLIP-seq
MIRT1183333	hsa-miR-4311	CLIP-seq
MIRT1183334	hsa-miR-4314	CLIP-seq
MIRT1183335	hsa-miR-4426	CLIP-seq
MIRT1183336	hsa-miR-4434	CLIP-seq
MIRT1183337	hsa-miR-4443	CLIP-seq
MIRT1183338	hsa-miR-4447	CLIP-seq
MIRT1183339	hsa-miR-4469	CLIP-seq
MIRT1183340	hsa-miR-4472	CLIP-seq
MIRT1183341	hsa-miR-4496	CLIP-seq
MIRT1183342	hsa-miR-4508	CLIP-seq
MIRT1183343	hsa-miR-4514	CLIP-seq
MIRT1183344	hsa-miR-4516	CLIP-seq
MIRT1183345	hsa-miR-4518	CLIP-seq
MIRT1183346	hsa-miR-4531	CLIP-seq
MIRT1183347	hsa-miR-4638-5p	CLIP-seq
MIRT1183348	hsa-miR-4643	CLIP-seq
MIRT1183349	hsa-miR-4644	CLIP-seq
MIRT1183350	hsa-miR-4645-3p	CLIP-seq
MIRT1183351	hsa-miR-4646-5p	CLIP-seq
MIRT1183352	hsa-miR-4647	CLIP-seq
MIRT1183353	hsa-miR-4651	CLIP-seq
MIRT1183354	hsa-miR-466	CLIP-seq
MIRT1183355	hsa-miR-4661-5p	CLIP-seq
MIRT1183356	hsa-miR-4662a-3p	CLIP-seq
MIRT1183357	hsa-miR-4662a-5p	CLIP-seq
MIRT1183358	hsa-miR-4662b	CLIP-seq
MIRT1183359	hsa-miR-4664-5p	CLIP-seq
MIRT1183360	hsa-miR-4665-3p	CLIP-seq
MIRT1183361	hsa-miR-4667-3p	CLIP-seq
MIRT1183362	hsa-miR-4692	CLIP-seq
MIRT1183363	hsa-miR-4701-5p	CLIP-seq
MIRT1183364	hsa-miR-4712-3p	CLIP-seq
MIRT1183365	hsa-miR-4723-5p	CLIP-seq
MIRT1183366	hsa-miR-4733-3p	CLIP-seq
MIRT1183367	hsa-miR-4738-5p	CLIP-seq
MIRT1183368	hsa-miR-4742-5p	CLIP-seq
MIRT1183369	hsa-miR-4745-3p	CLIP-seq
MIRT1183370	hsa-miR-4747-3p	CLIP-seq
MIRT1183371	hsa-miR-4758-3p	CLIP-seq
MIRT1183372	hsa-miR-4781-5p	CLIP-seq
MIRT1183373	hsa-miR-4789-3p	CLIP-seq
MIRT1183374	hsa-miR-4790-3p	CLIP-seq
MIRT1183375	hsa-miR-4796-3p	CLIP-seq
MIRT1183376	hsa-miR-4803	CLIP-seq
MIRT1183377	hsa-miR-483-3p	CLIP-seq
MIRT1183378	hsa-miR-485-5p	CLIP-seq
MIRT1183379	hsa-miR-486-3p	CLIP-seq
MIRT1183380	hsa-miR-516b	CLIP-seq
MIRT1183381	hsa-miR-520a-5p	CLIP-seq
MIRT1183382	hsa-miR-520d-5p	CLIP-seq
MIRT1183383	hsa-miR-524-5p	CLIP-seq
MIRT1183384	hsa-miR-525-5p	CLIP-seq
MIRT1183385	hsa-miR-541	CLIP-seq
MIRT1183386	hsa-miR-544b	CLIP-seq
MIRT1183387	hsa-miR-548ad	CLIP-seq
MIRT1183388	hsa-miR-548t	CLIP-seq
MIRT1183389	hsa-miR-548u	CLIP-seq
MIRT1183390	hsa-miR-555	CLIP-seq
MIRT1183391	hsa-miR-583	CLIP-seq
MIRT1183392	hsa-miR-588	CLIP-seq
MIRT1183393	hsa-miR-608	CLIP-seq
MIRT1183394	hsa-miR-625	CLIP-seq
MIRT1183395	hsa-miR-641	CLIP-seq
MIRT1183396	hsa-miR-642a	CLIP-seq
MIRT1183397	hsa-miR-650	CLIP-seq
MIRT1183398	hsa-miR-653	CLIP-seq
MIRT1183399	hsa-miR-661	CLIP-seq
MIRT1183400	hsa-miR-663	CLIP-seq
MIRT1183401	hsa-miR-668	CLIP-seq
MIRT1183402	hsa-miR-671-3p	CLIP-seq
MIRT1183403	hsa-miR-744	CLIP-seq
MIRT1551742	hsa-miR-1197	CLIP-seq
MIRT1551743	hsa-miR-1278	CLIP-seq
MIRT1551744	hsa-miR-24	CLIP-seq
MIRT1183308	hsa-miR-3175	CLIP-seq
MIRT1183309	hsa-miR-3180	CLIP-seq
MIRT1183310	hsa-miR-3180-3p	CLIP-seq
MIRT1183311	hsa-miR-3184	CLIP-seq
MIRT1183315	hsa-miR-3196	CLIP-seq
MIRT1551745	hsa-miR-33a	CLIP-seq
MIRT1551746	hsa-miR-33b	CLIP-seq
MIRT1551747	hsa-miR-455-3p	CLIP-seq
MIRT1183353	hsa-miR-4651	CLIP-seq
MIRT1551748	hsa-miR-4716-3p	CLIP-seq
MIRT1183365	hsa-miR-4723-5p	CLIP-seq
MIRT1551749	hsa-miR-572	CLIP-seq
MIRT1183393	hsa-miR-608	CLIP-seq
MIRT1183394	hsa-miR-625	CLIP-seq
MIRT1551750	hsa-miR-885-5p	CLIP-seq
MIRT1183353	hsa-miR-4651	CLIP-seq
MIRT1183393	hsa-miR-608	CLIP-seq
MIRT2053134	hsa-miR-10a	CLIP-seq
MIRT2053135	hsa-miR-10b	CLIP-seq
MIRT2053136	hsa-miR-1207-3p	CLIP-seq
MIRT2053137	hsa-miR-1252	CLIP-seq
MIRT1183282	hsa-miR-1254	CLIP-seq
MIRT1183286	hsa-miR-1266	CLIP-seq
MIRT1183288	hsa-miR-1302	CLIP-seq
MIRT2053138	hsa-miR-137	CLIP-seq
MIRT1183291	hsa-miR-1470	CLIP-seq
MIRT1183293	hsa-miR-185	CLIP-seq
MIRT1183294	hsa-miR-1908	CLIP-seq
MIRT1551744	hsa-miR-24	CLIP-seq
MIRT2053139	hsa-miR-2467-3p	CLIP-seq
MIRT1183303	hsa-miR-3116	CLIP-seq
MIRT2053140	hsa-miR-3127-3p	CLIP-seq
MIRT2053141	hsa-miR-3135b	CLIP-seq
MIRT2053142	hsa-miR-3150b-3p	CLIP-seq
MIRT2053143	hsa-miR-3151	CLIP-seq
MIRT2053144	hsa-miR-3154	CLIP-seq
MIRT2053145	hsa-miR-3164	CLIP-seq
MIRT2053146	hsa-miR-3173-3p	CLIP-seq
MIRT1183308	hsa-miR-3175	CLIP-seq
MIRT1183309	hsa-miR-3180	CLIP-seq
MIRT1183310	hsa-miR-3180-3p	CLIP-seq
MIRT1183311	hsa-miR-3184	CLIP-seq
MIRT1183313	hsa-miR-3192	CLIP-seq
MIRT1183315	hsa-miR-3196	CLIP-seq
MIRT1183317	hsa-miR-342-5p	CLIP-seq
MIRT1183318	hsa-miR-3612	CLIP-seq
MIRT2053147	hsa-miR-3652	CLIP-seq
MIRT1183321	hsa-miR-3653	CLIP-seq
MIRT2053148	hsa-miR-3929	CLIP-seq
MIRT2053149	hsa-miR-3936	CLIP-seq
MIRT1183329	hsa-miR-4269	CLIP-seq
MIRT2053150	hsa-miR-4271	CLIP-seq
MIRT1183331	hsa-miR-4298	CLIP-seq
MIRT1183332	hsa-miR-4306	CLIP-seq
MIRT1183333	hsa-miR-4311	CLIP-seq
MIRT1183334	hsa-miR-4314	CLIP-seq
MIRT2053151	hsa-miR-4419b	CLIP-seq
MIRT2053152	hsa-miR-4430	CLIP-seq
MIRT1183337	hsa-miR-4443	CLIP-seq
MIRT2053153	hsa-miR-4446-3p	CLIP-seq
MIRT2053154	hsa-miR-4457	CLIP-seq
MIRT2053155	hsa-miR-4468	CLIP-seq
MIRT2053156	hsa-miR-4478	CLIP-seq
MIRT1183342	hsa-miR-4508	CLIP-seq
MIRT1183345	hsa-miR-4518	CLIP-seq
MIRT2053157	hsa-miR-4640-3p	CLIP-seq
MIRT1183349	hsa-miR-4644	CLIP-seq
MIRT1183351	hsa-miR-4646-5p	CLIP-seq
MIRT1183353	hsa-miR-4651	CLIP-seq
MIRT2053158	hsa-miR-4659a-3p	CLIP-seq
MIRT2053159	hsa-miR-4659b-3p	CLIP-seq
MIRT1183355	hsa-miR-4661-5p	CLIP-seq
MIRT1183359	hsa-miR-4664-5p	CLIP-seq
MIRT1183361	hsa-miR-4667-3p	CLIP-seq
MIRT2053160	hsa-miR-4675	CLIP-seq
MIRT2053161	hsa-miR-4707-5p	CLIP-seq
MIRT1551748	hsa-miR-4716-3p	CLIP-seq
MIRT1183365	hsa-miR-4723-5p	CLIP-seq
MIRT2053162	hsa-miR-4725-3p	CLIP-seq
MIRT2053163	hsa-miR-4725-5p	CLIP-seq
MIRT2053164	hsa-miR-4731-5p	CLIP-seq
MIRT2053165	hsa-miR-4741	CLIP-seq
MIRT2053166	hsa-miR-4755-3p	CLIP-seq
MIRT2053167	hsa-miR-4784	CLIP-seq
MIRT2053168	hsa-miR-4786-5p	CLIP-seq
MIRT2053169	hsa-miR-4793-5p	CLIP-seq
MIRT1183379	hsa-miR-486-3p	CLIP-seq
MIRT2053170	hsa-miR-504	CLIP-seq
MIRT2053171	hsa-miR-542-5p	CLIP-seq
MIRT1183390	hsa-miR-555	CLIP-seq
MIRT1183393	hsa-miR-608	CLIP-seq
MIRT1183394	hsa-miR-625	CLIP-seq
MIRT2053172	hsa-miR-637	CLIP-seq
MIRT1183397	hsa-miR-650	CLIP-seq
MIRT1183399	hsa-miR-661	CLIP-seq
MIRT1183400	hsa-miR-663	CLIP-seq
MIRT1183403	hsa-miR-744	CLIP-seq
MIRT2053173	hsa-miR-873	CLIP-seq
MIRT2053174	hsa-miR-939	CLIP-seq
MIRT2053175	hsa-miR-942	CLIP-seq
MIRT2053136	hsa-miR-1207-3p	CLIP-seq
MIRT1183288	hsa-miR-1302	CLIP-seq
MIRT1183293	hsa-miR-185	CLIP-seq
MIRT1183294	hsa-miR-1908	CLIP-seq
MIRT2053139	hsa-miR-2467-3p	CLIP-seq
MIRT2053140	hsa-miR-3127-3p	CLIP-seq
MIRT2053144	hsa-miR-3154	CLIP-seq
MIRT1183308	hsa-miR-3175	CLIP-seq
MIRT1183309	hsa-miR-3180	CLIP-seq
MIRT1183310	hsa-miR-3180-3p	CLIP-seq
MIRT1183311	hsa-miR-3184	CLIP-seq
MIRT2282454	hsa-miR-3191	CLIP-seq
MIRT1183313	hsa-miR-3192	CLIP-seq
MIRT2282455	hsa-miR-3194-5p	CLIP-seq
MIRT1183315	hsa-miR-3196	CLIP-seq
MIRT1551745	hsa-miR-33a	CLIP-seq
MIRT1551746	hsa-miR-33b	CLIP-seq
MIRT1183317	hsa-miR-342-5p	CLIP-seq
MIRT2282456	hsa-miR-3616-3p	CLIP-seq
MIRT1183327	hsa-miR-3919	CLIP-seq
MIRT2282457	hsa-miR-3924	CLIP-seq
MIRT2282458	hsa-miR-4254	CLIP-seq
MIRT1183329	hsa-miR-4269	CLIP-seq
MIRT2282459	hsa-miR-4270	CLIP-seq
MIRT2053150	hsa-miR-4271	CLIP-seq
MIRT1183331	hsa-miR-4298	CLIP-seq
MIRT1183332	hsa-miR-4306	CLIP-seq
MIRT2282460	hsa-miR-4308	CLIP-seq
MIRT1183333	hsa-miR-4311	CLIP-seq
MIRT1183334	hsa-miR-4314	CLIP-seq
MIRT2282461	hsa-miR-4436b-3p	CLIP-seq
MIRT2282462	hsa-miR-4441	CLIP-seq
MIRT2053154	hsa-miR-4457	CLIP-seq
MIRT2053155	hsa-miR-4468	CLIP-seq
MIRT2282463	hsa-miR-4474-3p	CLIP-seq
MIRT1183342	hsa-miR-4508	CLIP-seq
MIRT1183349	hsa-miR-4644	CLIP-seq
MIRT1183351	hsa-miR-4646-5p	CLIP-seq
MIRT1183353	hsa-miR-4651	CLIP-seq
MIRT1183355	hsa-miR-4661-5p	CLIP-seq
MIRT1183359	hsa-miR-4664-5p	CLIP-seq
MIRT2282464	hsa-miR-4691-3p	CLIP-seq
MIRT1551748	hsa-miR-4716-3p	CLIP-seq
MIRT1183365	hsa-miR-4723-5p	CLIP-seq
MIRT2053162	hsa-miR-4725-3p	CLIP-seq
MIRT2282465	hsa-miR-4787-5p	CLIP-seq
MIRT1183393	hsa-miR-608	CLIP-seq
MIRT1183400	hsa-miR-663	CLIP-seq
MIRT1183403	hsa-miR-744	CLIP-seq
MIRT2391528	hsa-miR-138	CLIP-seq
MIRT1183293	hsa-miR-185	CLIP-seq
MIRT2391529	hsa-miR-218	CLIP-seq
MIRT2391530	hsa-miR-219-2-3p	CLIP-seq
MIRT2053141	hsa-miR-3135b	CLIP-seq
MIRT2053142	hsa-miR-3150b-3p	CLIP-seq
MIRT1183311	hsa-miR-3184	CLIP-seq
MIRT1183313	hsa-miR-3192	CLIP-seq
MIRT1183317	hsa-miR-342-5p	CLIP-seq
MIRT2053147	hsa-miR-3652	CLIP-seq
MIRT1183327	hsa-miR-3919	CLIP-seq
MIRT1183329	hsa-miR-4269	CLIP-seq
MIRT1183332	hsa-miR-4306	CLIP-seq
MIRT1183334	hsa-miR-4314	CLIP-seq
MIRT1183335	hsa-miR-4426	CLIP-seq
MIRT2053152	hsa-miR-4430	CLIP-seq
MIRT1183336	hsa-miR-4434	CLIP-seq
MIRT1183338	hsa-miR-4447	CLIP-seq
MIRT1183340	hsa-miR-4472	CLIP-seq
MIRT1183343	hsa-miR-4514	CLIP-seq
MIRT1183344	hsa-miR-4516	CLIP-seq
MIRT1183346	hsa-miR-4531	CLIP-seq
MIRT2053157	hsa-miR-4640-3p	CLIP-seq
MIRT1183349	hsa-miR-4644	CLIP-seq
MIRT1183351	hsa-miR-4646-5p	CLIP-seq
MIRT1183352	hsa-miR-4647	CLIP-seq
MIRT1183353	hsa-miR-4651	CLIP-seq
MIRT1183358	hsa-miR-4662b	CLIP-seq
MIRT1183359	hsa-miR-4664-5p	CLIP-seq
MIRT1183361	hsa-miR-4667-3p	CLIP-seq
MIRT1183362	hsa-miR-4692	CLIP-seq
MIRT2391531	hsa-miR-4707-3p	CLIP-seq
MIRT2053161	hsa-miR-4707-5p	CLIP-seq
MIRT1183365	hsa-miR-4723-5p	CLIP-seq
MIRT1183368	hsa-miR-4742-5p	CLIP-seq
MIRT2053167	hsa-miR-4784	CLIP-seq
MIRT2282465	hsa-miR-4787-5p	CLIP-seq
MIRT2053171	hsa-miR-542-5p	CLIP-seq
MIRT1183393	hsa-miR-608	CLIP-seq
MIRT1183403	hsa-miR-744	CLIP-seq
MIRT2438985	hsa-miR-1203	CLIP-seq
MIRT2438986	hsa-miR-4274	CLIP-seq
MIRT1551747	hsa-miR-455-3p	CLIP-seq
MIRT2053158	hsa-miR-4659a-3p	CLIP-seq
MIRT2053159	hsa-miR-4659b-3p	CLIP-seq
MIRT2438987	hsa-miR-4743	CLIP-seq
MIRT2053175	hsa-miR-942	CLIP-seq
MIRT2438985	hsa-miR-1203	CLIP-seq
MIRT2442409	hsa-miR-1976	CLIP-seq
MIRT2438986	hsa-miR-4274	CLIP-seq
MIRT2442410	hsa-miR-4286	CLIP-seq
MIRT2442411	hsa-miR-4423-5p	CLIP-seq
MIRT1551747	hsa-miR-455-3p	CLIP-seq
MIRT2438987	hsa-miR-4743	CLIP-seq
MIRT2580497	hsa-miR-1233	CLIP-seq
MIRT2580498	hsa-miR-188-3p	CLIP-seq
MIRT2580499	hsa-miR-4687-5p	CLIP-seq
MIRT2580500	hsa-miR-615-3p	CLIP-seq
MIRT2580497	hsa-miR-1233	CLIP-seq
MIRT2580498	hsa-miR-188-3p	CLIP-seq
MIRT2580499	hsa-miR-4687-5p	CLIP-seq
MIRT2580500	hsa-miR-615-3p	CLIP-seq

Show/Hide all (19)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000122	Process	Negative regulation of transcription by RNA polymerase II	IDA	19706729
GO:0000785	Component	Chromatin	ISA
GO:0000978	Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IBA
GO:0000981	Function	DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
GO:0000981	Function	DNA-binding transcription factor activity, RNA polymerase II-specific	ISA
GO:0000981	Function	DNA-binding transcription factor activity, RNA polymerase II-specific	TAS	7937100
GO:0003677	Function	DNA binding	IEA
GO:0003700	Function	DNA-binding transcription factor activity	IEA
GO:0003700	Function	DNA-binding transcription factor activity	TAS	7590749, 8340106
GO:0005515	Function	Protein binding	IPI	21953450, 25416956, 26871637, 32296183
GO:0005634	Component	Nucleus	IBA
GO:0005634	Component	Nucleus	IEA
GO:0006260	Process	DNA replication	IEA
GO:0006355	Process	Regulation of DNA-templated transcription	IEA
GO:0006357	Process	Regulation of transcription by RNA polymerase II	IBA
GO:0006366	Process	Transcription by RNA polymerase II	TAS	7937100
GO:0045893	Process	Positive regulation of DNA-templated transcription	IEA
GO:0045944	Process	Positive regulation of transcription by RNA polymerase II	IDA	19706729
GO:1990837	Function	Sequence-specific double-stranded DNA binding	IDA	28473536

MIM	HGNC	e!Ensembl
164005	7788	ENSG00000008441

Q14938

Protein name

Nuclear factor 1 X-type (NF1-X) (Nuclear factor 1/X) (CCAAT-box-binding transcription factor) (CTF) (Nuclear factor I/X) (NF-I/X) (NFI-X) (TGGCA-binding protein)

Protein function

Recognizes and binds the palindromic sequence 5'-TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replicatio

PDB

7QQD , 7QQE

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF10524	NfI_DNAbd_pre-N	7 → 46	Nuclear factor I protein pre-N-terminus	Family
PF03165	MH1	68 → 172	MH1 domain	Domain
PF00859	CTF_NFI	213 → 502	CTF/NF-I family transcription modulation region	Family

Tissue specificity

TISSUE SPECIFICITY: Widely expressed. {ECO:0000269|PubMed:20673863}.

Sequence

MYSPYCLTQDEFHPFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKDEERAVKDEL
LGEKPEIKQKWASRLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCL
RQADKVWRLDLVMVILFKGIPLESTDGERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLA
YFVHTPESGQSDSSNQQGDADIKPLPNGHLSFQDCFVTSGVWNVTELVRVSQTPVATASG
PNFSLADLESPSYYNINQVTLGRRSITSPPSTSTTKRPKSIDDSEMESPVDDVFYPGTGR
SPAAGSSQSSGWPNDVDAGPASLKKSGKLDFCSALSSQGSSPRMAFTHHPLPVLAGVRPG
SPRATASALHFPSTSIIQQSSPYFTHPTIRYHHHHGQDSLKEFVQFVCSDGSGQATGQPN
GSGQGKVPGSFLLPPPPPVARPVPLPMPDSKSTSTAPDGAALTPPSPSFATTGASSANRF
VSIGPRDGNFLNIPQQSQSWFL

Sequence length

502

Interactions

View interactions

462

Show/Hide Causal Diseases (7)

Phenotype Name	Clinical Significance	dbSNP ID	RCV Accession
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Intellectual disability	Likely pathogenic; Pathogenic	rs2013246660, rs2013265950	RCV001257605 RCV001257606
Malan overgrowth syndrome	Pathogenic; Likely pathogenic	rs760493118, rs2145192570, rs2145192745, rs2145192459, rs2145476207, rs2145190803, rs2145443002, rs2145430763, rs2145459429, rs2145191473, rs1326313565, rs2145191979, rs2145434937, rs2512743361, rs2512745631 View all (46 more)	RCV001384392 RCV001390439 RCV002544267 RCV001785348 RCV001808844 RCV001814612 RCV001814613 RCV001839245 RCV001953916 RCV002002495 RCV002204549 RCV002262177 RCV002272763 RCV002287552 RCV002291097 RCV002291119 RCV002465395 RCV002471663 RCV003041362 RCV003079229 RCV002512470 RCV000191110 RCV002858242 RCV002971000 RCV003008259 RCV003340596 RCV002810023 RCV003128117 RCV003223493 RCV003883146 RCV003326327 RCV003885345 RCV003448762 RCV003801226 RCV003809651 RCV003810388 RCV003990001 RCV004017215 RCV004556949 RCV006257392 RCV004595014 RCV000496183 RCV001263215 RCV000030636 RCV000030646 RCV000030647 RCV000590929 RCV000650505 RCV000677674 RCV001580278 RCV000704861 RCV000760224 RCV000818364 RCV000791914 RCV000810600 RCV001044662 RCV001193079 RCV001193080 RCV001253218 RCV001254040 RCV005057173 RCV001262356 RCV000077780
Marfanoid habitus and intellectual disability	Likely pathogenic; Pathogenic	rs1555696597, rs1599738398	RCV000850427 RCV000850473
Marshall-Smith syndrome	Pathogenic; Likely pathogenic	rs760493118, rs2145192570, rs2145432885, rs2145192041, rs2145192745, rs2145442806, rs2145430763, rs2145459429, rs2145191473, rs2145191618, rs2145191979, rs2512746910, rs2512747813, rs2512978311, rs2512965561 View all (42 more)	RCV001384392 RCV001390439 RCV001771788 RCV001775416 RCV002544267 RCV001809054 RCV002034709 RCV001953916 RCV002002495 RCV002250146 RCV002262177 RCV003041362 RCV003079229 RCV002512470 RCV002858242 RCV000194821 RCV000192696 RCV002971000 RCV003008259 RCV003148046 RCV002280877 RCV003883146 RCV003326709 RCV003484527 RCV003801226 RCV003809651 RCV003810388 RCV000503907 RCV003766975 RCV000990161 RCV000030637 RCV000030638 RCV000030639 RCV000030640 RCV000030641 RCV000030642 RCV000030643 RCV000030644 RCV000030645 RCV000677236 RCV002248806 RCV000650505 RCV002508942 RCV000704861 RCV000760224 RCV000761317 RCV000818364 RCV000791914 RCV000810600 RCV000853379 RCV000853419 RCV000990160 RCV000990162 RCV001044662 RCV001072120 RCV001199203 RCV001198775 RCV001706723
Neurodevelopmental disorder	Likely pathogenic	rs1599862464	RCV003389172
NFIX-related disorder	Likely pathogenic; Pathogenic	rs2145192570, rs886041647, rs1555696603	RCV004753305 RCV003417876 RCV003403568
See cases	Pathogenic; Likely pathogenic	rs2145191499, rs2145476583	RCV001420196 RCV002252384

Show/Hide Unknown Diseases (4)

Phenotype Name	Clinical Significance	dbSNP ID	RCV Accession
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
-	no classification for the single variant	rs1555696606	-
Cervical cancer	Benign	rs8103751	RCV005921738
Ovarian serous cystadenocarcinoma	Benign	rs8103751	RCV005921740
Sarcoma	Benign	rs8103751	RCV005921739

Show/Hide Text Mining Associations (41)

Disease Name	Relationship Type	References
Associations from Text MiningDisease associations identified through Pubtator
Alcohol Related Disorders	Associate	33034087
Bipolar Disorder	Associate	28115744
Bone Diseases Metabolic	Associate	20673863
Capillary Malformation Arteriovenous Malformation	Associate	20673863
Carcinogenesis	Associate	28800311
Carcinoma Embryonal	Associate	26509926
Carcinoma Non Small Cell Lung	Associate	34132359, 34394080
Carcinoma Squamous Cell	Associate	36060149
Cartilage Diseases	Associate	35791460
Cognition Disorders	Associate	33034087
Colorectal Neoplasms	Associate	28990086
Developmental Disabilities	Associate	20673863, 31088393
Esophageal Squamous Cell Carcinoma	Associate	28800311
Failure to Thrive	Associate	20673863
Genetic Diseases Inborn	Associate	38168088
Glioblastoma	Associate	36469009
Growth Disorders	Associate	29184170
Hemoglobinopathies	Associate	37316562
Intellectual Disability	Associate	29184170, 31088393
Kyphoscoliosis 1	Associate	20673863
Leukemia Myeloid Acute	Associate	36094501
Lymphatic Metastasis	Inhibit	28800311
Marshall Smith syndrome	Associate	20673863, 33034087, 38168088
Medulloblastoma	Associate	36849558
Megalencephaly	Associate	20673863, 29184170
Mental Retardation with Spastic Paraplegia	Associate	37534867
Neoplasm Metastasis	Associate	36495291
Neoplasms	Associate	28990086, 31045890
Neoplasms	Stimulate	36448712
Neoplasms	Inhibit	37686043
Nerve Degeneration	Associate	35791460
Osteoarthritis	Inhibit	35791460
Ovarian Neoplasms	Associate	29899543, 36448712, 36495291
Respiratory Insufficiency	Associate	20673863
Scoliosis	Associate	20673863
Secretory breast carcinoma	Associate	31045890
Simpson Golabi Behmel syndrome	Associate	29184170, 36379624
Solitary Fibrous Tumors	Associate	34299133
Sotos Syndrome	Associate	20673863, 29184170
Spinal Diseases	Associate	20673863
Syndrome	Associate	29184170, 29897170, 33034087, 36379624, 38168088

NFIX (nuclear factor I X)