Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
4744
Gene name Gene Name - the full gene name approved by the HGNC.
Neurofilament heavy chain
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
NEFH
Synonyms (NCBI Gene) Gene synonyms aliases
CMT2CC, NFH
Disease Acronyms (UniProt) Disease acronyms from UniProt database
CMT2CC
Chromosome Chromosome number
22
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
22q12.2
Summary Summary of gene provided in NCBI Entrez Gene.
Neurofilaments are type IV intermediate filament heteropolymers composed of light, medium, and heavy chains. Neurofilaments comprise the axoskeleton and functionally maintain neuronal caliber. They may also play a role in intracellular transport to axons
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs149955255 C>A,T Conflicting-interpretations-of-pathogenicity Coding sequence variant, missense variant
rs606231212 CAGAAGCAAAGTCCCCTGAGAAGGCCAAGTCCCCAGTGAAGG>- Not-provided, risk-factor Inframe deletion, coding sequence variant
rs876657411 GA>- Pathogenic Frameshift variant, coding sequence variant
rs876657412 ->AGCC Pathogenic Frameshift variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT017917 hsa-miR-335-5p Microarray 18185580
MIRT020455 hsa-miR-106b-5p Microarray 17242205
MIRT021571 hsa-miR-142-3p Microarray 17612493
MIRT1179953 hsa-miR-1207-5p CLIP-seq
MIRT1179954 hsa-miR-1909 CLIP-seq
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000226 Process Microtubule cytoskeleton organization IEA
GO:0005200 Function Structural constituent of cytoskeleton IMP 7536898
GO:0005200 Function Structural constituent of cytoskeleton ISS
GO:0005515 Function Protein binding IPI 32814053
GO:0005737 Component Cytoplasm IDA 27040688
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
162230 7737 ENSG00000100285
Protein
UniProt ID P12036
Protein name Neurofilament heavy polypeptide (NF-H) (200 kDa neurofilament protein) (Neurofilament triplet H protein)
Protein function Neurofilaments usually contain three intermediate filament proteins: NEFL, NEFM, and NEFH which are involved in the maintenance of neuronal caliber. NEFH has an important function in mature axons that is not subserved by the two smaller NF prote
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00038 Filament 96 412 Intermediate filament protein Coiled-coil
PF07142 DUF1388 522 547 Repeat of unknown function (DUF1388) Repeat
PF07142 DUF1388 536 561 Repeat of unknown function (DUF1388) Repeat
PF07142 DUF1388 590 610 Repeat of unknown function (DUF1388) Repeat
PF07142 DUF1388 595 624 Repeat of unknown function (DUF1388) Repeat
PF07142 DUF1388 624 651 Repeat of unknown function (DUF1388) Repeat
PF07142 DUF1388 664 692 Repeat of unknown function (DUF1388) Repeat
PF07142 DUF1388 678 706 Repeat of unknown function (DUF1388) Repeat
PF07142 DUF1388 692 720 Repeat of unknown function (DUF1388) Repeat
PF07142 DUF1388 706 734 Repeat of unknown function (DUF1388) Repeat
PF07142 DUF1388 720 748 Repeat of unknown function (DUF1388) Repeat
Sequence
MMSFGGADALLGAPFAPLHGGGSLHYALARKGGAGGTRSAAGSSSGFHSWTRTSVSSVSA
SPSRFRGAGAASSTDSLDTLSNGPEGCMVAVATSRSEKEQLQALNDRFAGYIDKVRQLEA
HNRSLEGEAAALRQQQAGRSAMGELYEREVREMRGAVLRLGAARGQLRLEQEHLLEDIAH
VRQRLDDEARQREEAEAAARALARFAQEAEAARVDLQKKAQALQEECGYLRRHHQEEVGE
LLGQIQGSGAAQAQMQAETRDALKCDVTSALREIRAQLEGHAVQSTLQSEEWFRVRLDRL
SEAAKVNTDAMRSAQEEITEYRRQLQARTTELEALKSTKDSLERQRSELEDRHQADIASY
QEAIQQLDAELRNTKWEMAAQLREYQDLLNVKMALDIEIAAYRKLLEGEECR
IGFGPIPF
SLPEGLPKIPSVSTHIKVKSEEKIKVVEKSEKETVIVEEQTEETQVTEEVTEEEEKEAKE
EEGKEEEGGEEEEAEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKS
PAEVKSP
EKAKSPAKEEAKSP
PEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKS
PEKAKSPVKE
EAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEK
AKSPEKAKS
PEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKE
EAKSPEKAKSPVKE
EAKTPEKAKSPVKE
EAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEA
RSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVK
VKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKK
EEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEK
KDTKEEKAKKPEEKPKTEAKAKEDDKTLSKEPSKPKAEKAEKSSSTDQKDSKPPEKATED
KAAKGK
Sequence length 1026
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  
  Amyotrophic lateral sclerosis
Pathways of neurodegeneration - multiple diseases
 
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Amyotrophic lateral sclerosis Amyotrophic Lateral Sclerosis, Amyotrophic Lateral Sclerosis, Familial, Amyotrophic lateral sclerosis rs267607084, rs312262720, rs312262752, rs121908287, rs121908288, rs29001584, rs28941475, rs121434378, rs386134173, rs386134174, rs80356730, rs80356727, rs4884357, rs80356717, rs80356733
View all (171 more)
23941283
Charcot-marie-tooth disease CHARCOT-MARIE-TOOTH DISEASE, AXONAL, TYPE 2CC rs137852739, rs137852737, rs118203972, rs118203974, rs267607183, rs267606878, rs121908287, rs1562648373, rs121908288, rs1368013631, rs28940291, rs28940292, rs28940293, rs28940294, rs28940295
View all (1137 more)
Lateral sclerosis AMYOTROPHIC LATERAL SCLEROSIS 1, Amyotrophic Lateral Sclerosis, Sporadic rs386134181, rs386134176, rs386134174, rs386134184, rs386134178, rs1693780539, rs1574698048
Myopathy Myopathy rs137854521, rs386834236, rs121908557, rs121909092, rs111033570, rs104894299, rs104894294, rs121909273, rs121909274, rs121909275, rs199474699, rs199476140, rs118192165, rs118192169, rs118192166
View all (81 more)
Unknown
Disease term Disease name Evidence References Source
Mental depression Depressive disorder ClinVar
Charcot-Marie-Tooth Disease Charcot-Marie-Tooth disease axonal type 2CC GenCC
Amyotrophic Lateral Sclerosis amyotrophic lateral sclerosis GenCC
Uterine Fibroids Uterine Fibroids GWAS
Associations from Text Mining
Disease Name Relationship Type References
Alzheimer Disease Associate 20624930, 40118053
Amyotrophic Lateral Sclerosis Associate 23755159, 25009280, 25957632, 29959860, 30029677, 37612427, 40607881
Ataxia Telangiectasia Associate 40118053
Basal Ganglia Diseases Associate 21278408, 25957632
Breast Neoplasms Associate 25985363
Carcinoma Hepatocellular Associate 24012984, 36042248
Carcinoma Renal Cell Associate 24464810, 35838992
Deafness Associate 30180840
Diffuse Neurofibrillary Tangles with Calcification Associate 21828286
Esophageal Neoplasms Associate 19472401