Gene Gene information from NCBI Gene database.
Entrez ID 47
Gene name ATP citrate lyase
Gene symbol ACLY
Synonyms (NCBI Gene)
ACLATPCLCLATP
Chromosome 17
Chromosome location 17q21.2
Summary ATP citrate lyase is the primary enzyme responsible for the synthesis of cytosolic acetyl-CoA in many tissues. The enzyme is a tetramer (relative molecular weight approximately 440,000) of apparently identical subunits. It catalyzes the formation of acety
miRNA miRNA information provided by mirtarbase database.
549
miRTarBase ID miRNA Experiments Reference
MIRT049373 hsa-miR-92a-3p CLASH 23622248
MIRT049373 hsa-miR-92a-3p CLASH 23622248
MIRT047450 hsa-miR-10b-5p CLASH 23622248
MIRT045906 hsa-miR-125b-5p CLASH 23622248
MIRT045416 hsa-miR-149-5p CLASH 23622248
Transcription factors Transcription factors information provided by TRRUST V2 database.
1
Transcription factor Regulation Reference
SREBF1 Activation 10777536
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
38
GO ID Ontology Definition Evidence Reference
GO:0000166 Function Nucleotide binding IEA
GO:0003824 Function Catalytic activity IEA
GO:0003878 Function ATP citrate synthase activity IBA
GO:0003878 Function ATP citrate synthase activity IDA 1371749, 9116495, 10653665, 19286649
GO:0003878 Function ATP citrate synthase activity IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
108728 115 ENSG00000131473
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P53396
Protein name ATP-citrate synthase (EC 2.3.3.8) (ATP-citrate (pro-S-)-lyase) (ACL) (Citrate cleavage enzyme)
Protein function Catalyzes the cleavage of citrate into oxaloacetate and acetyl-CoA, the latter serving as common substrate in multiple biochemical reactions in protein, carbohydrate and lipid metabolism. {ECO:0000269|PubMed:10653665, ECO:0000269|PubMed:1371749,
PDB 3MWD , 3MWE , 3PFF , 5TDE , 5TDF , 5TDM , 5TDZ , 5TE1 , 5TEQ , 5TES , 5TET , 6HXH , 6HXK , 6HXL , 6HXM , 6O0H , 6POE , 6POF , 6QFB , 6UI9 , 6UIA , 6UUW , 6UUZ , 6UV5 , 6Z2H , 7LIW , 7LJ9 , 7LLA , 7RIG , 7RKZ , 7RMP , 8G1E , 8G1F , 8G5C , 8G5D
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF16114 Citrate_bind 244 421 ATP citrate lyase citrate-binding Domain
PF02629 CoA_binding 494 600 CoA binding domain Domain
PF00549 Ligase_CoA 660 785 CoA-ligase Domain
PF00285 Citrate_synt 883 1086 Citrate synthase, C-terminal domain Domain
Sequence
MSAKAISEQTGKELLYKFICTTSAIQNRFKYARVTPDTDWARLLQDHPWLLSQNLVVKPD
QLIKRRGKLGLVGVNLTLDGVKSWLKPRLGQEATVGKATGFLKNFLIEPFVPHSQAEEFY
VCIYATREGDYVLFHHEGGVDVGDVDAKAQKLLVGVDEKLNPEDIKKHLLVHAPEDKKEI
LASFISGLFNFYEDLYFTYLEINPLVVTKDGVYVLDLAAKVDATADYICKVKWGDIEFPP
PFGREAYPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNE
LANYGEYSGAPSEQQTYDYAKTILSLMTREKHPDGKILIIGGSIANFTNVAATFKGIVRA
IRDYQGPLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFGTETHMTAIVGMALG
H
RPIPNQPPTAAHTANFLLNASGSTSTPAPSRTASFSESRADEVAPAKKAKPAMPQDSVP
SPRSLQGKSTTLFSRHTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQK
FYWGHKEILIPVFKNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEG

IPEALTRKLIKKADQKGVTIIGPATVGGIKPGCFKIGNTGGMLDNILASKLYRPGSVAYV
SRSGGMSNELNNIISRTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPGVKMIVVLGEIG
GTEEYKICRGIKEGRLTKPIVCWCIGTCATMFSSEVQFGHAGACANQASETAVAKNQALK
EAGVF
VPRSFDELGEIIQSVYEDLVANGVIVPAQEVPPPTVPMDYSWARELGLIRKPASF
MTSICDERGQELIYAGMPITEVFKEEMGIGGVLGLLWFQKRLPKYSCQFIEMCLMVTADH
GPAVSGAHNTIICARAGKDLVSSLTSGLLTIGDRFGGALDAAAKMFSKAFDSGIIPMEFV
NKMKKEGKLIMGIGHRVKSINNPDMRVQILKDYVRQHFPATPLLDYALEVEKITTSKKPN
LILNVDGLIGVAFVDMLRNCGSFTREEADEYIDIGALNGIFVLGRSMGFIGHYLDQKRLK
QGLYRH
PWDDISYVLPEHMSM
Sequence length 1101
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Citrate cycle (TCA cycle)
Metabolic pathways
  ChREBP activates metabolic gene expression
Neutrophil degranulation
Fatty acyl-CoA biosynthesis
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
8
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Familial cancer of breast Likely benign rs148168367 RCV005907705
Gastric cancer Likely benign rs148168367 RCV005907708
Lung cancer Likely benign rs148168367 RCV005907712
Malignant tumor of esophagus Likely benign rs148168367 RCV005907706
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Arthritis Infectious Stimulate 37414769
Behcet Syndrome Stimulate 30050389
Breast Neoplasms Associate 26928812, 28443474, 37899460
Breast Neoplasms Stimulate 36562384
Carcinogenesis Associate 35449157, 38009671
Carcinoma Hepatocellular Associate 25735330, 29271183, 30176945, 34311471, 35227773, 35449157
Carcinoma Non Small Cell Lung Associate 25227797, 25962060
Carcinoma Ovarian Epithelial Associate 22266777
Carcinoma Pancreatic Ductal Stimulate 34505339
Cardiovascular Diseases Associate 30865797, 32231389