| SNP ID |
Visualize variation |
Clinical significance |
Consequence |
| rs137853061 |
G>A |
Pathogenic |
Missense variant, coding sequence variant, non coding transcript variant |
| rs137853062 |
C>T |
Pathogenic |
Missense variant, coding sequence variant, non coding transcript variant |
| rs142714881 |
C>T |
Conflicting-interpretations-of-pathogenicity |
Missense variant, coding sequence variant, non coding transcript variant |
| rs147277149 |
C>T |
Pathogenic |
Coding sequence variant, stop gained, non coding transcript variant |
| rs148909799 |
A>G |
Conflicting-interpretations-of-pathogenicity, uncertain-significance |
Coding sequence variant, missense variant, non coding transcript variant |
| rs754990692 |
C>T |
Pathogenic |
Stop gained, non coding transcript variant, coding sequence variant |
| rs768980918 |
GAGA>- |
Pathogenic, uncertain-significance |
Splice acceptor variant, coding sequence variant, non coding transcript variant |
| rs796052001 |
GTT>- |
Conflicting-interpretations-of-pathogenicity, uncertain-significance |
Coding sequence variant, non coding transcript variant, inframe deletion, intron variant |
| rs893229476 |
T>C |
Pathogenic |
Non coding transcript variant, intron variant |
| rs1189298981 |
G>-,GG |
Likely-pathogenic |
Coding sequence variant, non coding transcript variant, frameshift variant |
| rs1293600145 |
A>T |
Likely-pathogenic |
Stop gained, coding sequence variant, non coding transcript variant |
| rs1554006017 |
T>G |
Pathogenic |
Coding sequence variant, non coding transcript variant, stop gained |
| rs1579619636 |
G>- |
Pathogenic |
Intron variant, splice donor variant, non coding transcript variant, frameshift variant, coding sequence variant |
| rs1579758005 |
AG>- |
Pathogenic |
Non coding transcript variant, frameshift variant, coding sequence variant |
|
| Phenotype Name |
Clinical Significance |
dbSNP ID |
RCV Accession |
| Colon adenocarcinoma |
Likely pathogenic |
rs2126808287 |
RCV005927088 |
| Disorders of Intracellular Cobalamin Metabolism |
Likely pathogenic; Pathogenic |
rs137853062, rs893229476 |
RCV002512874 RCV002537460 |
| Homocystinuria without methylmalonic aciduria |
Pathogenic |
rs754990692 |
RCV000825568 |
| Methylcobalamin deficiency type cblE |
Pathogenic; Likely pathogenic |
rs1207820860, rs2126745614, rs1421007019, rs2126772123, rs1440404360, rs2126808162, rs761061866, rs1212701617, rs2126663415, rs2126745648, rs2126675629, rs2126793645, rs1737852706, rs772608494, rs2126727585, rs772547714, rs2126675707, rs754619743, rs1400065323, rs2126812977, rs2126676051, rs1353165398, rs757800887, rs2126692827, rs2479100979, rs2479102741, rs1254913477, rs771216289, rs147960130, rs2478802312, rs1748372023, rs2478892105, rs2478943007, rs2479100396, rs2478942663, rs201348649, rs2478740609, rs1737818730, rs2479101644, rs2479148171, rs2478805727, rs2479147977, rs2479073064, rs2126812944, rs137853061, rs2126808021, rs137853062, rs2126808287, rs147277149, rs747303076, rs2478648157, rs748533060, rs747041200, rs767610650, rs2478892282, rs1737148739, rs2479023142, rs867974337, rs1734858651, rs2478890930, rs2478700578, rs2478942096, rs2478705208, rs2478743643, rs2478703868, rs146940932, rs751833826, rs2478942250, rs919772858, rs2479102700, rs1748694912, rs1554006017, rs1293600145, rs768980918, rs1579619636, rs1579758005, rs893229476, rs754990692, rs1189298981, rs1747827267, rs375908206, rs778738842, rs1747853230, rs1408257020, rs1734931275, rs1737110583, rs1748371268, rs1734927527, rs752858024, rs1561245416, rs777997657, rs1219605974 View all (77 more) |
RCV001380274 RCV001383252 RCV001380276 RCV001385070 RCV001383913 RCV001382154 RCV001836441 RCV001782470 RCV001994586 RCV001941840 RCV001960278 RCV001942388 RCV001952302 RCV002020460 RCV002000164 RCV002035229 RCV001994688 RCV001979539 RCV002033125 RCV001953506 RCV002046730 RCV002503659 RCV001914825 RCV002012576 RCV003091956 RCV003097546 RCV002595427 RCV002600189 RCV002725733 RCV002770836 RCV002820743 RCV002815149 RCV002842594 RCV002863739 RCV002881842 RCV002886271 RCV002988551 RCV003013433 RCV003003293 RCV003034051 RCV003046283 RCV003034770 RCV003047515 RCV000007443 RCV000007446 RCV000007447 RCV000007449 RCV003143428 RCV001068078 RCV004783066 RCV005036814 RCV005036815 RCV003507512 RCV005100186 RCV003486328 RCV003507681 RCV003507696 RCV003508399 RCV003507119 RCV003507172 RCV003507115 RCV003507921 RCV003507987 RCV003618182 RCV003617420 RCV003617567 RCV003825216 RCV003822840 RCV003830114 RCV003842431 RCV003873944 RCV005038715 RCV000625774 RCV001834982 RCV000824011 RCV000805731 RCV000805181 RCV000820217 RCV001869267 RCV001066391 RCV001059702 RCV001043620 RCV001042201 RCV001036277 RCV001206309 RCV001201719 RCV001206236 RCV001212318 RCV001204859 RCV001226344 RCV001226293 RCV001236196 RCV001243293 RCV001233224 |
| MTRR-related disorder |
Likely pathogenic; Pathogenic |
rs2126675707, rs768980918 |
RCV003395318 RCV004753037 |
| Neural tube defects, folate-sensitive |
Pathogenic; Likely pathogenic |
rs1421007019, rs761061866, rs772547714, rs754619743, rs1400065323, rs1353165398, rs2479100979, rs2479102741, rs147960130, rs1737818730, rs137853061, rs137853062, rs767124472, rs2126808287, rs147277149, rs2479159008, rs2476220505, rs780448175, rs2478797022, rs747303076, rs2478742432, rs1181934270, rs1748331186, rs1212701617, rs2126645870, rs2478648157, rs772608494, rs748533060, rs1189298981, rs1738695332, rs2478742839, rs2478800173, rs1532268, rs747041200, rs1737854315, rs2479147425, rs2478705556, rs767610650, rs2478947085, rs2479103276, rs2478890236, rs2479023948, rs2478965467, rs2479148728, rs143058455, rs1748694912, rs1293600145, rs768980918, rs1579619636, rs893229476, rs754990692, rs375908206, rs1734858651, rs778738842, rs1408257020, rs1734931275, rs752858024, rs777997657 View all (43 more) |
RCV005038175 RCV002501867 RCV004571699 RCV003464333 RCV003470947 RCV002503659 RCV003465958 RCV003459750 RCV003465817 RCV003465890 RCV003460433 RCV003460434 RCV004572835 RCV004572859 RCV003469197 RCV003461980 RCV003461981 RCV003461982 RCV003461983 RCV003461984 RCV003470268 RCV003461985 RCV003470269 RCV003461986 RCV003470270 RCV003461987 RCV003470271 RCV003461988 RCV003461989 RCV003461990 RCV003461991 RCV003461992 RCV003461993 RCV003470272 RCV003461994 RCV003463063 RCV003470273 RCV003470274 RCV003463065 RCV003463066 RCV003463067 RCV003463068 RCV003463069 RCV003470275 RCV004576279 RCV004576280 RCV004576283 RCV003465365 RCV003465707 RCV003467413 RCV003467497 RCV002487868 RCV003461302 RCV002481908 RCV003461459 RCV003461431 RCV003462674 RCV003462692 RCV003462774 RCV004570619 |
|
| Phenotype Name |
Clinical Significance |
dbSNP ID |
RCV Accession |
| Acute myeloid leukemia |
Likely benign |
rs6879300 |
RCV005917709 |
| Cervical cancer |
Likely benign |
rs6879300 |
RCV005917711 |
| Down syndrome, susceptibility to |
Benign; Likely benign |
rs1801394 |
RCV000007445 |
| Familial cancer of breast |
Uncertain significance |
rs757997490, rs138098668 |
RCV005926372 RCV005901961 |
| Gastric cancer |
Uncertain significance |
rs138098668 |
RCV005901962 |
| Gastrointestinal stromal tumor |
Benign; Likely benign |
rs162036, rs10380, rs1532268, rs1801394 |
RCV000144925 RCV000144924 RCV000144927 RCV000144926 |
| Malignant lymphoma, large B-cell, diffuse |
Benign |
rs2303079 |
RCV005911391 |
| Malignant tumor of esophagus |
Likely benign; Benign |
rs6879300, rs145654110 |
RCV005917710 RCV005899015 |
| Malignant tumor of urinary bladder |
Benign |
rs145654110 |
RCV005899014 |
| Melanoma |
Uncertain significance |
rs757997490 |
RCV005926373 |
| Methotrexate response |
Benign; Likely benign |
rs1801394 |
RCV003482129 |
| Methylcobalamin deficiency type cblG |
Conflicting classifications of pathogenicity |
rs1254913477 |
RCV004577039 |
| Neural tube defects, folate-sensitive, susceptibility to |
Benign; Likely benign |
rs1801394 |
RCV000007444 |
| Nonpapillary renal cell carcinoma |
Uncertain significance |
rs148267849 |
RCV005913965 |
| Ovarian serous cystadenocarcinoma |
Benign |
rs75888760 |
RCV005924607 |
| Sarcoma |
Likely benign; Benign |
rs6879300, rs75888760 |
RCV005917712 RCV005924606 |
| Uterine corpus endometrial carcinoma |
Benign |
rs75888760 |
RCV005924608 |
|
| Disease Name |
Relationship Type |
References |
| Abruptio Placentae |
Associate |
17376725 |
| Adenoma |
Associate |
16985020, 31740010 |
| Adrenoleukodystrophy |
Associate |
19353223 |
| Anemia Macrocytic |
Associate |
25526710 |
| Anemia Megaloblastic |
Associate |
9501215 |
| Aortic Aneurysm Abdominal |
Associate |
20871623 |
| Aortic Dissection |
Associate |
20871623 |
| Autistic Disorder |
Associate |
22057956 |
| Azoospermia Nonobstructive |
Associate |
31377750 |
| Beckwith Wiedemann Syndrome |
Associate |
30165906 |
| Birth Weight |
Associate |
35631247 |
| Breast Neoplasms |
Associate |
18842997, 22373582, 24130171, 25598430, 25801246, 27347936 |
| Carcinoma Hepatocellular |
Associate |
19035314, 25318605, 27936032 |
| Carcinoma Non Small Cell Lung |
Associate |
20737570 |
| Carcinoma Renal Cell |
Associate |
24278388 |
| Cardiovascular Diseases |
Associate |
28253292 |
| Cartilage Diseases |
Associate |
27469625 |
| Celiac Disease |
Associate |
21688148 |
| Cerebral Infarction |
Associate |
21935458, 30884202 |
| Choline Deficiency |
Associate |
27342765 |
| Cleft Lip |
Associate |
26963196, 27604992 |
| Cleft Palate |
Associate |
27167580 |
| Cognition Disorders |
Associate |
25526710 |
| Colonic Neoplasms |
Associate |
21603981 |
| Colorectal Neoplasms |
Associate |
19776626, 20549016, 21603981, 22719222, 22961839, 26108676, 29925788, 31554631, 31740010, 36364857, 38514198 |
| Colorectal Neoplasms |
Stimulate |
22719222 |
| Communication Disorders |
Associate |
25526710 |
| Conotruncal cardiac defects |
Associate |
19493349, 24585533, 30165839, 31851787 |
| Coronary Artery Disease |
Associate |
20962453 |
| Death |
Associate |
25840420, 27456431 |
| Death |
Inhibit |
27456431 |
| Dental Caries |
Associate |
37531512 |
| Developmental Disabilities |
Associate |
9501215 |
| Diabetes Gestational |
Associate |
35631247 |
| Diabetes Mellitus Type 2 |
Associate |
27983710 |
| Dissection Thoracic Aorta |
Associate |
20871623 |
| Double Outlet Right Ventricle |
Associate |
22057956, 29293099 |
| Down Syndrome |
Associate |
10930360, 11443546, 15585767, 18257130, 18273817, 19096127, 20868477, 21045269, 22377700 |
| Drug Related Side Effects and Adverse Reactions |
Associate |
17009228, 30927276 |
| Ductus Arteriosus Patent |
Associate |
22057956 |
| Dyslipidemias |
Associate |
26337056, 30786773 |
| Esophagitis |
Associate |
25337902 |
| Failure to Thrive |
Associate |
25526710 |
| Folate Malabsorption Hereditary |
Associate |
26266420, 26561410, 35631247 |
| Hashimoto Disease |
Associate |
23039890 |
| Heart Defects Congenital |
Associate |
22057956, 28758112, 37183022 |
| Heart Septal Defects Ventricular |
Associate |
28758112, 29293099, 33757570 |
| Hepatitis B Chronic |
Associate |
38634541 |
| Homocystinuria |
Associate |
25878036, 9501215 |
| Homocystinuria Megaloblastic Anemia due to Defect in Cobalamin Metabolism CblE Complementation Type |
Associate |
25978498, 3384945 |
| Hyperhomocysteinemia |
Associate |
15612980, 30786773, 9501215 |
| Hypertension |
Associate |
23188888, 26266420, 26337056, 30786773, 32410296, 37154151 |
| Hypertriglyceridemia |
Associate |
26337056, 30786773 |
| Insulin Resistance |
Associate |
31200713 |
| Insulin Resistance |
Stimulate |
31246991 |
| Leukemia Myelogenous Chronic BCR ABL Positive |
Associate |
36292614 |
| Leukoencephalopathies |
Associate |
25526710 |
| Lung Diseases |
Associate |
24307700 |
| Lung Neoplasms |
Associate |
23372658, 24307700 |
| Lymphatic Metastasis |
Associate |
25840420 |
| Lymphoma Large B Cell Diffuse |
Stimulate |
18042267 |
| Lymphoma Non Hodgkin |
Associate |
17119116, 18042267, 23913011, 25384508 |
| Meningioma |
Associate |
18483342, 34169999 |
| Mesothelioma Malignant |
Associate |
32429658 |
| Metabolic Diseases |
Associate |
25318605, 28253292 |
| Metabolic Syndrome |
Associate |
25429430 |
| Metabolism Inborn Errors |
Associate |
31203192 |
| Methylcobalamin Deficiency CblG Type |
Associate |
25526710, 25978498, 31951343 |
| Methylmalonic Aciduria and Homocystinuria CblF Type |
Associate |
25978498 |
| Microphthalmia Syndromic 10 |
Associate |
25526710 |
| Migraine Disorders |
Associate |
23430981 |
| Migraine with Aura |
Inhibit |
23430981 |
| Multiple Sclerosis |
Associate |
31038186 |
| Muscle Hypotonia |
Associate |
25526710 |
| Neoplasms |
Inhibit |
10673282 |
| Neoplasms |
Associate |
14716779, 16985020, 17533396, 20549016, 31127906 |
| Neural Tube Defects |
Associate |
10930360, 15060097, 26334892, 32410296 |
| Neurocognitive Disorders |
Associate |
25526710 |
| Neutropenia |
Associate |
30927276 |
| Obesity |
Associate |
27793164, 27983710 |
| Open Bite |
Associate |
35830630 |
| Orofacial Cleft 1 |
Associate |
26963196, 27167580 |
| Osteoarthritis |
Associate |
27469625 |
| Overweight |
Associate |
27793164, 27983710 |
| Paroxysmal ventricular fibrillation |
Associate |
27759448 |
| Polycystic Ovary Syndrome |
Inhibit |
31482954 |
| Polycystic Ovary Syndrome |
Associate |
31482954, 33407572 |
| Premature Birth |
Associate |
35631247 |
| Prostatic Neoplasms |
Associate |
10673282, 31127906 |
| Rectal Neoplasms |
Associate |
21603981 |
| Severe Acute Respiratory Syndrome |
Associate |
25526710 |
| Skin Diseases |
Associate |
29421402 |
| Squamous Cell Carcinoma of Head and Neck |
Associate |
17596206 |
| Stomach Neoplasms |
Associate |
20099281, 25337902, 25840420, 27456431, 30884202 |
| Stomatitis |
Associate |
27452984 |
| Temporomandibular Joint Disorders |
Associate |
21615938 |
| Thyroiditis Autoimmune |
Associate |
23039890 |
| Tourette Syndrome |
Associate |
21618417 |
| Urinary Bladder Neoplasms |
Associate |
28348449 |
| Urinary Tract Infections |
Associate |
39303450 |
| Uterine Cervical Neoplasms |
Associate |
29740106 |
| Uterine Cervicitis |
Associate |
32295543 |
| Vascular Diseases |
Associate |
9501215 |
| Vitiligo |
Associate |
30720153 |
| Xanthomatosis Cerebrotendinous |
Associate |
15612980 |
|