Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene miRNA Gene ontology Other IDs Protein Associated diseases
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	442582
Gene name Gene Name - the full gene name approved by the HGNC.	STAG3 cohesin complex component like 2 (pseudogene)
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	STAG3L2
Synonyms (NCBI Gene) Gene synonyms aliases	STAG3L1, STAG3L2P, STAG3L3
Chromosome Chromosome number	7
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	7q11.23

Show/Hide all(90)

miRTarBase ID	miRNA	Experiments	Reference
MIRT038561	hsa-miR-106b-3p	CLASH	23622248
MIRT1394660	hsa-miR-106a	CLIP-seq
MIRT1394661	hsa-miR-106b	CLIP-seq
MIRT1394662	hsa-miR-1182	CLIP-seq
MIRT1394663	hsa-miR-1236	CLIP-seq
MIRT1394664	hsa-miR-1266	CLIP-seq
MIRT1394665	hsa-miR-1285	CLIP-seq
MIRT1394666	hsa-miR-150	CLIP-seq
MIRT1394667	hsa-miR-17	CLIP-seq
MIRT1394668	hsa-miR-20a	CLIP-seq
MIRT1394669	hsa-miR-20b	CLIP-seq
MIRT1394670	hsa-miR-2116	CLIP-seq
MIRT1394671	hsa-miR-302a	CLIP-seq
MIRT1394672	hsa-miR-302b	CLIP-seq
MIRT1394673	hsa-miR-302c	CLIP-seq
MIRT1394674	hsa-miR-302d	CLIP-seq
MIRT1394675	hsa-miR-302e	CLIP-seq
MIRT1394676	hsa-miR-3132	CLIP-seq
MIRT1394677	hsa-miR-3178	CLIP-seq
MIRT1394678	hsa-miR-3187-5p	CLIP-seq
MIRT1394679	hsa-miR-326	CLIP-seq
MIRT1394680	hsa-miR-330-5p	CLIP-seq
MIRT1394681	hsa-miR-3529	CLIP-seq
MIRT1394682	hsa-miR-372	CLIP-seq
MIRT1394683	hsa-miR-373	CLIP-seq
MIRT1394684	hsa-miR-378g	CLIP-seq
MIRT1394685	hsa-miR-379	CLIP-seq
MIRT1394686	hsa-miR-3909	CLIP-seq
MIRT1394687	hsa-miR-4423-5p	CLIP-seq
MIRT1394688	hsa-miR-4437	CLIP-seq
MIRT1394689	hsa-miR-4438	CLIP-seq
MIRT1394690	hsa-miR-4451	CLIP-seq
MIRT1394691	hsa-miR-4486	CLIP-seq
MIRT1394692	hsa-miR-4518	CLIP-seq
MIRT1394693	hsa-miR-4650-3p	CLIP-seq
MIRT1394694	hsa-miR-4674	CLIP-seq
MIRT1394695	hsa-miR-4690-3p	CLIP-seq
MIRT1394696	hsa-miR-4731-5p	CLIP-seq
MIRT1394697	hsa-miR-4781-3p	CLIP-seq
MIRT1394698	hsa-miR-501-3p	CLIP-seq
MIRT1394699	hsa-miR-502-3p	CLIP-seq
MIRT1394700	hsa-miR-5095	CLIP-seq
MIRT1394701	hsa-miR-510	CLIP-seq
MIRT1394702	hsa-miR-512-3p	CLIP-seq
MIRT1394703	hsa-miR-519d	CLIP-seq
MIRT1394704	hsa-miR-520a-3p	CLIP-seq
MIRT1394705	hsa-miR-520b	CLIP-seq
MIRT1394706	hsa-miR-520c-3p	CLIP-seq
MIRT1394707	hsa-miR-520d-3p	CLIP-seq
MIRT1394708	hsa-miR-520e	CLIP-seq
MIRT1394709	hsa-miR-520g	CLIP-seq
MIRT1394710	hsa-miR-520h	CLIP-seq
MIRT1394711	hsa-miR-561	CLIP-seq
MIRT1394712	hsa-miR-566	CLIP-seq
MIRT1394713	hsa-miR-600	CLIP-seq
MIRT1394714	hsa-miR-612	CLIP-seq
MIRT1394715	hsa-miR-661	CLIP-seq
MIRT1394716	hsa-miR-7	CLIP-seq
MIRT1394717	hsa-miR-760	CLIP-seq
MIRT1394718	hsa-miR-93	CLIP-seq
MIRT1394664	hsa-miR-1266	CLIP-seq
MIRT2118402	hsa-miR-2117	CLIP-seq
MIRT2118403	hsa-miR-297	CLIP-seq
MIRT1394676	hsa-miR-3132	CLIP-seq
MIRT2118404	hsa-miR-320e	CLIP-seq
MIRT1394687	hsa-miR-4423-5p	CLIP-seq
MIRT1394692	hsa-miR-4518	CLIP-seq
MIRT1394693	hsa-miR-4650-3p	CLIP-seq
MIRT2118405	hsa-miR-4768-5p	CLIP-seq
MIRT1394697	hsa-miR-4781-3p	CLIP-seq
MIRT1394698	hsa-miR-501-3p	CLIP-seq
MIRT1394699	hsa-miR-502-3p	CLIP-seq
MIRT1394701	hsa-miR-510	CLIP-seq
MIRT1394711	hsa-miR-561	CLIP-seq
MIRT2118406	hsa-miR-567	CLIP-seq
MIRT2118407	hsa-miR-922	CLIP-seq
MIRT2340517	hsa-miR-1224-3p	CLIP-seq
MIRT2340518	hsa-miR-1260	CLIP-seq
MIRT2340519	hsa-miR-1260b	CLIP-seq
MIRT2340520	hsa-miR-1280	CLIP-seq
MIRT2340521	hsa-miR-1343	CLIP-seq
MIRT2118403	hsa-miR-297	CLIP-seq
MIRT2118404	hsa-miR-320e	CLIP-seq
MIRT2340522	hsa-miR-3663-5p	CLIP-seq
MIRT2340523	hsa-miR-371-5p	CLIP-seq
MIRT2340524	hsa-miR-371b-5p	CLIP-seq
MIRT1394684	hsa-miR-378g	CLIP-seq
MIRT2340525	hsa-miR-4661-3p	CLIP-seq
MIRT2340526	hsa-miR-532-3p	CLIP-seq
MIRT2118406	hsa-miR-567	CLIP-seq

Show/Hide all(5)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000785	Component	Chromatin	IBA	21873635
GO:0003682	Function	Chromatin binding	IBA	21873635
GO:0005634	Component	Nucleus	IBA	21873635
GO:0007062	Process	Sister chromatid cohesion	IBA	21873635
GO:0008278	Component	Cohesin complex	IBA	21873635

MIM	HGNC	e!Ensembl
HGNC	33886	N/A

Protein

UniProt ID

P0CL84

Protein name

Putative STAG3-like protein 2 (Stromal antigen 3-like protein 2)

Family and domains

Sequence

MIFSMLRKLPKVTCRDVLPEIRAICIEEIGCWMQSYSTSFLTDSYLKYIGWTLHDKHREV
RVKCVKALKGLYGNRDLTARLELFTGRFKDWMVSMIVDREYSVAVEAVRLLILILKNMEG
VLMDVDCESVYPIV

Sequence length

134

Interactions

View interactions

Show/Hide Causal Diseases (1)

Disease term	Disease name	dbSNP ID	References
Causal
Breast carcinoma	Breast Carcinoma	rs80359671, rs11540652, rs28934575, rs28897672, rs137886232, rs193922376, rs80357783, rs80359306, rs80359405, rs80359507, rs80359598, rs80358429, rs397507683, rs397515636, rs80359451 View all (71 more)	29059683

Show/Hide Unknown Diseases (1)

Disease term	Disease name	Evidence	References	Source
Unknown
Breast Cancer	Breast Cancer	Importantly, breast cancer patients bearing PRC2 LOF mutations displayed significantly worse prognosis compared with PRC2 wild-type patients		GWAS, CBGDA

Show/Hide Text Mining Associations (1)

Disease Name	Relationship Type	References
Associations from Text Mining
Hypertension Portal	Associate	36628818

STAG3L2 (STAG3 cohesin complex component like 2 (pseudogene))