Gene Gene information from NCBI Gene database.
Entrez ID 4363
Gene name ATP binding cassette subfamily C member 1 (ABCC1 blood group)
Gene symbol ABCC1
Synonyms (NCBI Gene)
ABC29ABCCDFNA77GS-XMRPMRP1
Chromosome 16
Chromosome location 16p13.11
Summary The protein encoded by this gene is a member of the superfamily of ATP-binding cassette (ABC) transporters. ABC proteins transport various molecules across extra-and intra-cellular membranes. ABC genes are divided into seven distinct subfamilies (ABC1, MD
SNPs SNP information provided by dbSNP.
1
SNP ID Visualize variation Clinical significance Consequence
rs60782127 G>T Conflicting-interpretations-of-pathogenicity Missense variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
202
miRTarBase ID miRNA Experiments Reference
MIRT004494 hsa-miR-134-5p qRT-PCRWestern blotNorthern blot 20371173
MIRT003199 hsa-miR-7-5p Luciferase reporter assayWestern blot 20099276
MIRT003199 hsa-miR-7-5p Luciferase reporter assayWestern blot 20099276
MIRT003198 hsa-miR-345-5p Luciferase reporter assayWestern blot 20099276
MIRT003198 hsa-miR-345-5p Luciferase reporter assayWestern blot 20099276
Transcription factors Transcription factors information provided by TRRUST V2 database.
3
Transcription factor Regulation Reference
MYCN Activation 10348353;14737110;7923112
MYCN Unknown 9516823
SP1 Repression 23765166
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
86
GO ID Ontology Definition Evidence Reference
GO:0000166 Function Nucleotide binding IEA
GO:0005524 Function ATP binding IEA
GO:0005886 Component Plasma membrane IBA
GO:0005886 Component Plasma membrane IDA 17050692, 23137377, 28112518
GO:0005886 Component Plasma membrane IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
158343 51 ENSG00000103222
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P33527
Protein name Multidrug resistance-associated protein 1 (EC 7.6.2.2) (ATP-binding cassette sub-family C member 1) (Glutathione-S-conjugate-translocating ATPase ABCC1) (EC 7.6.2.3) (Leukotriene C(4) transporter) (LTC4 transporter)
Protein function Mediates export of organic anions and drugs from the cytoplasm (PubMed:10064732, PubMed:11114332, PubMed:16230346, PubMed:7961706, PubMed:9281595). Mediates ATP-dependent transport of glutathione and glutathione conjugates, leukotriene C4, estra
PDB 2CBZ , 4C3Z , 8VT4 , 8VUX , 8VVC
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00664 ABC_membrane 325 596 ABC transporter transmembrane region Family
PF00005 ABC_tran 661 796 ABC transporter Domain
PF00664 ABC_membrane 975 1244 ABC transporter transmembrane region Family
PF00005 ABC_tran 1310 1458 ABC transporter Domain
Tissue specificity TISSUE SPECIFICITY: Lung, testis and peripheral blood mononuclear cells.
Sequence
MALRGFCSADGSDPLWDWNVTWNTSNPDFTKCFQNTVLVWVPCFYLWACFPFYFLYLSRH
DRGYIQMTPLNKTKTALGFLLWIVCWADLFYSFWERSRGIFLAPVFLVSPTLLGITMLLA
TFLIQLERRKGVQSSGIMLTFWLVALVCALAILRSKIMTALKEDAQVDLFRDITFYVYFS
LLLIQLVLSCFSDRSPLFSETIHDPNPCPESSASFLSRITFWWITGLIVRGYRQPLEGSD
LWSLNKEDTSEQVVPVLVKNWKKECAKTRKQPVKVVYSSKDPAQPKESSKVDANEEVEAL
IVKSPQKEWNPSLFKVLYKTFGPYFLMSFFFKAIHDLMMFSGPQILKLLIKFVNDTKAPD
WQGYFYTVLLFVTACLQTLVLHQYFHICFVSGMRIKTAVIGAVYRKALVITNSARKSSTV
GEIVNLMSVDAQRFMDLATYINMIWSAPLQVILALYLLWLNLGPSVLAGVAVMVLMVPVN
AVMAMKTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFKDKVLAIRQEELKVLK
KSAYLSAVGTFTWVCTPFLVALCTFAVYVTIDENNILDAQTAFVSLALFNILRFPL
NILP
MVISSIVQASVSLKRLRIFLSHEELEPDSIERRPVKDGGGTNSITVRNATFTWARSDPPT
LNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVAIKGSVAYVPQQAWIQND
SLRENILFGCQLEEPYYRSVIQACALLPDLEILPSGDRTEIGEKGVNLSGGQKQRVSLAR
AVYSNADIYLFDDPLS
AVDAHVGKHIFENVIGPKGMLKNKTRILVTHSMSYLPQVDVIIV
MSGGKISEMGSYQELLARDGAFAEFLRTYASTEQEQDAEENGVTGVSGPGKEAKQMENGM
LVTDSAGKQLQRQLSSSSSYSGDISRHHNSTAELQKAEAKKEETWKLMEADKAQTGQVKL
SVYWDYMKAIGLFISFLSIFLFMCNHVSALASNYWLSLWTDDPIVNGTQEHTKVRLSVYG
ALGISQGIAVFGYSMAVSIGGILASRCLHVDLLHSILRSPMSFFERTPSGNLVNRFSKEL
DTVDSMIPEVIKMFMGSLFNVIGACIVILLATPIAAIIIPPLGLIYFFVQRFYVASSRQL
KRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRWLA
VRLECVGNCIVLFAALFAVISRHSLSAGLVGLSVSYSLQVTTYL
NWLVRMSSEMETNIVA
VERLKEYSETEKEAPWQIQETAPPSSWPQVGRVEFRNYCLRYREDLDFVLRHINVTINGG
EKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGINIAKIGLHDLRFKITIIPQDPVLF
SGSLRMNLDPFSQYSDEEVWTSLELAHLKDFVSALPDKLDHECAEGGENLSVGQRQLVCL
ARALLRKTKILVLDEATA
AVDLETDDLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVL
DKGEIQEYGAPSDLLQQRGLFYSMAKDAGLV
Sequence length 1531
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Antifolate resistance
ABC transporters
Sphingolipid signaling pathway
Vitamin digestion and absorption
Folate transport and metabolism
MicroRNAs in cancer
  Heme degradation
Cobalamin (Cbl, vitamin B12) transport and metabolism
Synthesis of Leukotrienes (LT) and Eoxins (EX)
ABC-family proteins mediated transport
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
35
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Hearing loss, autosomal dominant 77 Pathogenic rs199797323 RCV001194461
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
ABCC1-related disorder Likely benign; Benign rs199675371, rs200039403, rs182118381, rs539166124, rs77428024, rs187769078, rs199815778, rs112282109, rs8057331, rs8187844, rs200760311, rs8187859 RCV003909484
RCV003912311
RCV003911640
RCV003913863
RCV003944084
RCV003961643
RCV003943837
RCV003932297
RCV003932199
RCV003971798
RCV003967002
RCV003935936
Acute myeloid leukemia Benign rs8187856 RCV005903729
Atorvastatin response drug response rs45511401 RCV002291809
Cervical cancer Benign rs8187856 RCV005903730
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Acidosis Lactic Stimulate 33097055
Adenocarcinoma Associate 16107775, 28081737, 30941955
Adenocarcinoma of Lung Associate 31986409
Adenoma Stimulate 10562814
Airway Remodeling Associate 20487524
Alzheimer Disease Associate 32878879
Anemia Associate 25881102
Arthritis Rheumatoid Associate 19248091
Arthropathy progressive pseudorheumatoid of childhood Associate 21435954
Asthma Associate 30655622, 34648729