Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
4325
Gene name Gene Name - the full gene name approved by the HGNC.
Matrix metallopeptidase 16
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
MMP16
Synonyms (NCBI Gene) Gene synonyms aliases
C8orf57, MMP-X2, MT-MMP2, MT-MMP3, MT3-MMP
Chromosome Chromosome number
8
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
8q21.3
Summary Summary of gene provided in NCBI Entrez Gene.
Proteins of the matrix metalloproteinase (MMP) family are involved in the breakdown of extracellular matrix in normal physiological processes, such as embryonic development, reproduction, and tissue remodeling, as well as in disease processes, such as art
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT004887 hsa-miR-146b-5p U138 19265686
MIRT004887 hsa-miR-146b-5p U138 19265686
MIRT004887 hsa-miR-146b-5p U138 19265686
MIRT004887 hsa-miR-146b-5p U138 19265686
MIRT004978 hsa-miR-31-5p Luciferase reporter assay, qRT-PCR, Western blot 19524507
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0001501 Process Skeletal system development IBA
GO:0001503 Process Ossification IEA
GO:0001958 Process Endochondral ossification IEA
GO:0004222 Function Metalloendopeptidase activity IBA
GO:0004222 Function Metalloendopeptidase activity IDA 27229514
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
602262 7162 ENSG00000156103
Protein
UniProt ID P51512
Protein name Matrix metalloproteinase-16 (MMP-16) (EC 3.4.24.-) (MMP-X2) (Membrane-type matrix metalloproteinase 3) (MT-MMP 3) (MTMMP3) (Membrane-type-3 matrix metalloproteinase) (MT3-MMP) (MT3MMP)
Protein function Endopeptidase that degrades various components of the extracellular matrix, such as collagen type III and fibronectin. Activates progelatinase A. Involved in the matrix remodeling of blood vessels. Isoform short cleaves fibronectin and also coll
PDB 1RM8
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01471 PG_binding_1 38 96 Putative peptidoglycan binding domain Domain
PF00413 Peptidase_M10 126 291 Matrixin Domain
PF00045 Hemopexin 349 390 Hemopexin Repeat
PF00045 Hemopexin 392 436 Hemopexin Repeat
PF00045 Hemopexin 439 485 Hemopexin Repeat
PF00045 Hemopexin 487 532 Hemopexin Repeat
PF11857 DUF3377 537 607 Domain of unknown function (DUF3377) Family
Tissue specificity TISSUE SPECIFICITY: Expressed in heart, brain, placenta, ovary and small intestine. Isoform Short is found in the ovary.
Sequence
Sequence length 607
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Parathyroid hormone synthesis, secretion and action
MicroRNAs in cancer
  Activation of Matrix Metalloproteinases
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Associated diseases Disease associations categorized as Causal (pathogenic variants), Unknown (uncertain genetic evidence), or Text Mining (literature-based associations)
Unknown Includes: (1) ClinVar NON-pathogenic variants (Uncertain, Benign, Conflicting, VUS), (2) GenCC associations, (3) GWAS associations, (4) CBGDA evidence-based associations. NOTE: Diseases with pathogenic evidence are excluded to avoid conflicts.
Disease merge term Disease name Evidence References Source
Bipolar Disorder Bipolar disorder N/A N/A GWAS
Metabolic Syndrome Sweet taste perception in obesity with metabolic syndrome N/A N/A GWAS
Schizophrenia Schizophrenia N/A N/A GWAS
Associations from Text Mining Disease associations identified through Pubtator
Disease Name Relationship Type References
Aortic Valve Stenosis Inhibit 33129260
Arthritis Rheumatoid Associate 10857781
Asthma Associate 34448644
Astrocytoma Associate 10027400
Atrial Fibrillation Inhibit 33129260
Breast Neoplasms Associate 30468477
Carcinogenesis Associate 27292876
Carcinoma Hepatocellular Associate 34730679
Carcinoma Non Small Cell Lung Associate 34747300
Cataract Associate 32572898