Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
4126
Gene name Gene Name - the full gene name approved by the HGNC.
Mannosidase beta
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
MANBA
Synonyms (NCBI Gene) Gene synonyms aliases
MANB1
Chromosome Chromosome number
4
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
4q24
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a member of the glycosyl hydrolase 2 family. The encoded protein localizes to the lysosome where it is the final exoglycosidase in the pathway for N-linked glycoprotein oligosaccharide catabolism. Mutations in this gene are associated wi
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs121434334 A>G Pathogenic Missense variant, coding sequence variant
rs121434335 C>A,G,T Pathogenic Coding sequence variant, stop gained, missense variant, genic upstream transcript variant, 5 prime UTR variant
rs121434336 G>A,C Pathogenic Coding sequence variant, upstream transcript variant, stop gained, missense variant, genic upstream transcript variant
rs374545788 C>A Likely-pathogenic Splice acceptor variant
rs752343321 ->TCCCAACTAA Pathogenic Genic upstream transcript variant, coding sequence variant, stop gained, intron variant, inframe insertion
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT017002 hsa-miR-335-5p Microarray 18185580
MIRT1127428 hsa-miR-1224-5p CLIP-seq
MIRT1127429 hsa-miR-1304 CLIP-seq
MIRT1127430 hsa-miR-3915 CLIP-seq
MIRT1127431 hsa-miR-4317 CLIP-seq
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0004567 Function Beta-mannosidase activity IBA 21873635
GO:0004567 Function Beta-mannosidase activity IDA 30552791
GO:0004567 Function Beta-mannosidase activity TAS
GO:0005764 Component Lysosome IBA 21873635
GO:0005886 Component Plasma membrane TAS
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
609489 6831 ENSG00000109323
Protein
UniProt ID O00462
Protein name Beta-mannosidase (EC 3.2.1.25) (Lysosomal beta A mannosidase) (Mannanase) (Mannase)
Protein function Exoglycosidase that cleaves the single beta-linked mannose residue from the non-reducing end of all N-linked glycoprotein oligosaccharides.
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF02836 Glyco_hydro_2_C 340 574 Glycosyl hydrolases family 2, TIM barrel domain Domain
PF17786 Mannosidase_ig 700 795 Mannosidase Ig/CBM-like domain Domain
PF17753 Ig_mannosidase 799 878 Ig-fold domain Domain
Tissue specificity TISSUE SPECIFICITY: Ubiquitous. Detected in pancreas, kidney and placenta, ands at lower levels in liver, lung, brain, heart and muscle. {ECO:0000269|PubMed:9384606}.
Sequence
MRLHLLLLLALCGAGTTAAELSYSLRGNWSICNGNGSLELPGAVPGCVHSALFQQGLIQD
SYYRFNDLNYRWVSLDNWTYSKEFKIPFEISKWQKVNLILEGVDTVSKILFNEVTIGETD
NMFNRYSFDITNVVRDVNSIELRFQSAVLYAAQQSKAHTRYQVPPDCPPLVQKGECHVNF
VRKEQCSFSWDWGPSFPTQGIWKDVRIEAYNICHLNYFTFSPIYDKSAQEWNLEIESTFD
VVSSKPVGGQVIVAIPKLQTQQTYSIELQPGKRIVELFVNISKNITVETWWPHGHGNQTG
YNMTVLFELDGGLNIEKSAKVYFRTVELIEEPIKGSPGLSFYFKINGFPIFLKGSNWIPA
DSFQDRVTSELLRLLLQSVVDANMNTLRVWGGGIYEQDEFYELCDELGIMVWQDFMFACA
LYPTDQGFLDSVTAEVAYQIKRLKSHPSIIIWSGNNENEEALMMNWYHISFTDRPIYIKD
YVTLYVKNIRELVLAGDKSRPFITSSPTNGAETVAEAWVSQNPNSNYFGDVHFYDYISDC
WNWKVFPKARFASEYGYQSWPSFSTLEKVSSTED
WSFNSKFSLHRQHHEGGNKQMLYQAG
LHFKLPQSTDPLRTFKDTIYLTQVMQAQCVKTETEFYRRSRSEIVDQQGHTMGALYWQLN
DIWQAPSWASLEYGGKWKMLHYFAQNFFAPLLPVGFENENTFYIYGVSDLHSDYSMTLSV
RVHTWSSLEPVCSRVTERFVMKGGEAVCLYEEPVSELLRRCGNCTRESCVVSFYLSADHE
LLSPTNYHFLSSPKE
AVGLCKAQITAIISQQGDIFVFDLETSAVAPFVWLDVGSIPGRFS
DNGFLMTEKTRTILFYPWEPTSKNELEQSFHVTSLTDI
Y
Sequence length 879
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Other glycan degradation
Lysosome
  Neutrophil degranulation
Lysosomal oligosaccharide catabolism
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Attention deficit hyperactivity disorder Attention deficit hyperactivity disorder rs786205019 31619474
Beta-mannosidosis beta-Mannosidosis, Beta-mannosidosis rs890870104, rs752343321, rs1730296951, rs121434334, rs771587242, rs121434335, rs121434336, rs1188116333, rs1057517201, rs1553945794, rs374545788, rs775574131, rs1341763493, rs764364492, rs1553948361
View all (5 more)
30872814, 18980795, 18565776, 27604308, 12468273, 1623631, 9384606, 12890191, 22369051, 16904924, 30552791, 19728872, 17420068
Mental retardation Intellectual Disability rs5742905, rs267607136, rs267607137, rs2131714307, rs267607038, rs267607042, rs80338685, rs137853127, rs80338815, rs28940893, rs387906309, rs121908096, rs121908099, rs587784365, rs121918315
View all (1024 more)
Multiple sclerosis Multiple Sclerosis rs104895219, rs483353022, rs483353023, rs483353028, rs483353029, rs483353024, rs483353030, rs3207617, rs483353031, rs483353032, rs483353033, rs483353034, rs483353035, rs483353036, rs483353039
View all (4 more)
21833088
Unknown
Disease term Disease name Evidence References Source
Asthma Asthma 31619474 ClinVar
Sarcoidosis Sarcoidosis 26051272 ClinVar, GWAS
Biliary Cholangitis Biliary Cholangitis GWAS
Multiple Sclerosis Multiple Sclerosis GWAS
Associations from Text Mining
Disease Name Relationship Type References
Atrial Fibrillation Stimulate 37581400
Atrial Fibrillation Associate 37967346
Attention Deficit Disorder with Hyperactivity Associate 35052433
Attention Deficit Disorder with Hyperactivity Inhibit 35306338
Autism Spectrum Disorder Associate 37907504
beta Mannosidosis Associate 19728872, 30886116, 32847582
beta Mannosidosis Inhibit 19728872
Cholangitis Sclerosing Associate 36828809
Deafness Associate 32847582
Digestive System Diseases Associate 30528300