Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
401548
Gene name Gene Name - the full gene name approved by the HGNC.
Sorting nexin family member 30
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
SNX30
Synonyms (NCBI Gene) Gene synonyms aliases
ATG24A
Chromosome Chromosome number
9
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
9q32
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT030989 hsa-miR-21-5p Microarray 18591254
MIRT437954 hsa-miR-133a-3p In situ hybridization, Microarray, qRT-PCR, Luciferase reporter assay, Western blot 24715690
MIRT437954 hsa-miR-133a-3p In situ hybridization, Microarray, qRT-PCR, Luciferase reporter assay, Western blot 24715690
MIRT437954 hsa-miR-133a-3p In situ hybridization, Microarray, qRT-PCR, Luciferase reporter assay, Western blot 24715690
MIRT437954 hsa-miR-133a-3p In situ hybridization, Microarray, qRT-PCR, Luciferase reporter assay, Western blot 24715690
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000407 Component Phagophore assembly site IBA
GO:0000423 Process Mitophagy IBA
GO:0005515 Function Protein binding IPI 23085988, 28514442, 32513819, 33961781, 35271311
GO:0005737 Component Cytoplasm IEA
GO:0005768 Component Endosome IEA
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
620955 23685 ENSG00000148158
Protein
UniProt ID Q5VWJ9
Protein name Sorting nexin-30
Protein function Involved in the regulation of endocytosis and in several stages of intracellular trafficking (PubMed:32513819). Together with SNX4, involved in autophagosome assembly (PubMed:32513819).
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00787 PX 119 206 PX domain Domain
Sequence
MAGGPPKALPSTGPHSLRDMPHPLAGSSSEEAVGGDSTPSPDLLMARSFGDKDLILPNGG
TPAGTSSPASSSSLLNRLQLDDDIDGETRDLFVIVDDPKKHVCTMETYITYRITTKSTRV
EFDLPEYSVRRRYQDFDWLRSKLEESQPTHLIPPLPEKFVVKGVVDRFSEEFVETRRKAL
DKFLKRITDHPVLSFNEHFNIFLTAK
DLNAYKKQGIALLTRMGESVKHVTGGYKLRTRPL
EFAAIGDYLDTFALKLGTIDRIAQRIIKEEIEYLVELREYGPVYSTWSALEGELAEPLEG
VSACIGNCSTALEELTDDMTEDFLPVLREYILYSDSMKSVLKKRDQVQAEYEAKLEAVAL
RKEDRPKVPADVEKCQDRMECFNADLKADMERWQNNKRQDFRQLLMGMADKNIQYYEKCL
MAWESIIPLLQEKQEAK
Sequence length 437
Interactions View interactions
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