Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
3988
Gene name Gene Name - the full gene name approved by the HGNC.
Lipase A, lysosomal acid type
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
LIPA
Synonyms (NCBI Gene) Gene synonyms aliases
CESD, LAL
Disease Acronyms (UniProt) Disease acronyms from UniProt database
CESD
Chromosome Chromosome number
10
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
10q23.31
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes lipase A, the lysosomal acid lipase (also known as cholesterol ester hydrolase). This enzyme functions in the lysosome to catalyze the hydrolysis of cholesteryl esters and triglycerides. Mutations in this gene can result in Wolman diseas
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs2228159 A>C,G,T Uncertain-significance, conflicting-interpretations-of-pathogenicity Coding sequence variant, missense variant
rs116928232 C>G,T Pathogenic, pathogenic-likely-pathogenic, likely-pathogenic Synonymous variant, missense variant, coding sequence variant
rs121965086 A>G Pathogenic, pathogenic-likely-pathogenic Missense variant, coding sequence variant
rs121965087 G>C Pathogenic Intron variant, stop gained, coding sequence variant
rs139282720 C>T Conflicting-interpretations-of-pathogenicity Synonymous variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT018033 hsa-miR-335-5p Microarray 18185580
MIRT024588 hsa-miR-215-5p Microarray 19074876
MIRT026530 hsa-miR-192-5p Microarray 19074876
MIRT037705 hsa-miR-744-5p CLASH 23622248
MIRT054198 hsa-miR-125b-5p Luciferase reporter assay, Microarray, qRT-PCR, Western blot 22723551
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000902 Process Cell morphogenesis IEA
GO:0001650 Component Fibrillar center IDA
GO:0004771 Function Sterol esterase activity IBA 21873635
GO:0004771 Function Sterol esterase activity IDA 1718995, 7204383, 8112342, 15269241
GO:0004771 Function Sterol esterase activity IMP 9633819
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
613497 6617 ENSG00000107798
Protein
UniProt ID P38571
Protein name Lysosomal acid lipase/cholesteryl ester hydrolase (Acid cholesteryl ester hydrolase) (LAL) (EC 3.1.1.13) (Cholesteryl esterase) (Diacylglycerol lipase) (Lipase A) (Sterol esterase) (Triacylglycerol ester hydrolase) (Triacylglycerol lipase)
Protein function Catalyzes the deacylation of cholesteryl ester core lipids of endocytosed low density lipoproteins to generate free fatty acids and cholesterol (PubMed:15269241, PubMed:1718995, PubMed:7204383, PubMed:8112342, PubMed:9633819). Hydrolyzes triglyc
PDB 6V7N
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00561 Abhydrolase_1 80 381 alpha/beta hydrolase fold Domain
Tissue specificity TISSUE SPECIFICITY: Most abundantly expressed in brain, lung, kidney and mammary gland, a moderate expression seen in placenta and expressed at low levels in the liver and heart. {ECO:0000269|PubMed:8112342}.
Sequence
Sequence length 399
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Steroid biosynthesis
Lysosome
Efferocytosis
Cholesterol metabolism
  LDL clearance
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Anemia Anemia rs118204044, rs118204045, rs118204046, rs121918330, rs869320719, rs869312029, rs121918332, rs869320724, rs767094129, rs786205058, rs786205059, rs137853119, rs137853120, rs137853121, rs1384933966
View all (89 more)
Cholestasis Cholestasis rs121909103, rs751511532, rs376368459, rs762702807, rs1578490102, rs1578499691, rs1578504946, rs1317656688, rs199791850, rs1452792080, rs1578491039 8254026
Coronary artery disease CORONARY ARTERY DISEASE, AUTOSOMAL DOMINANT, 1, Coronary Artery Disease rs137852988, rs121918313, rs121918529, rs121918531, rs137852340, rs1555800701, rs1215189537 23202125, 28714975, 26343387, 21378988, 29212778
Developmental delay Global developmental delay rs28941770, rs199469464, rs281865469, rs143747297, rs398123009, rs587777428, rs786205133, rs606231459, rs797044854, rs797045027, rs864309504, rs878853160, rs886039902, rs886042046, rs886041291
View all (32 more)
Unknown
Disease term Disease name Evidence References Source
Cirrhosis Cirrhosis ClinVar
Coronary heart disease Coronary heart disease 21606135, 21378988, 21966275 ClinVar
Myocardial infarction Myocardial Infarction 26343387 ClinVar
Wolman Disease Wolman disease GenCC
Associations from Text Mining
Disease Name Relationship Type References
Atherosclerosis Associate 14522500
Brain Diseases Metabolic Inborn Associate 22395809
Cholangiocarcinoma Associate 36107601
Cholesterol Ester Storage Disease Associate 16255772
Cirrhosis Cryptogenic Inhibit 36326406
Colorectal Neoplasms Associate 35172832
Coronary Artery Disease Associate 12972290, 21966275, 24069331, 31645127, 35192625
Coronary Disease Inhibit 12972290
Cystic Fibrosis Associate 24586523
Diabetes Mellitus Associate 22395809