Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene information from NCBI Gene database. Gene miRNA Gene ontology Other IDs Protein Associated diseases
Entrez ID	387640
Gene name	SKI/DACH domain containing 1
Gene symbol	SKIDA1
Synonyms (NCBI Gene)	C10orf140DLN-1
Chromosome	10
Chromosome location	10p12.31

Show/Hide all (64)

miRTarBase ID	miRNA	Experiments	Reference
MIRT708898	hsa-miR-1306-5p	HITS-CLIP	19536157
MIRT720978	hsa-miR-4284	HITS-CLIP	19536157
MIRT720977	hsa-miR-4437	HITS-CLIP	19536157
MIRT708897	hsa-miR-4777-3p	HITS-CLIP	19536157
MIRT708896	hsa-miR-5089-3p	HITS-CLIP	19536157
MIRT708898	hsa-miR-1306-5p	HITS-CLIP	19536157
MIRT708897	hsa-miR-4777-3p	HITS-CLIP	19536157
MIRT708896	hsa-miR-5089-3p	HITS-CLIP	19536157
MIRT708898	hsa-miR-1306-5p	HITS-CLIP	19536157
MIRT708897	hsa-miR-4777-3p	HITS-CLIP	19536157
MIRT708896	hsa-miR-5089-3p	HITS-CLIP	19536157
MIRT534318	hsa-miR-532-3p	PAR-CLIP	22012620
MIRT534317	hsa-miR-497-3p	PAR-CLIP	22012620
MIRT534316	hsa-miR-3145-5p	PAR-CLIP	22012620
MIRT534315	hsa-miR-508-5p	PAR-CLIP	22012620
MIRT534314	hsa-miR-4495	PAR-CLIP	22012620
MIRT534313	hsa-miR-1224-3p	PAR-CLIP	22012620
MIRT534312	hsa-miR-7108-3p	PAR-CLIP	22012620
MIRT534311	hsa-miR-5088-3p	PAR-CLIP	22012620
MIRT534310	hsa-miR-150-5p	PAR-CLIP	22012620
MIRT534309	hsa-miR-2116-3p	PAR-CLIP	22012620
MIRT534308	hsa-miR-30a-5p	PAR-CLIP	22012620
MIRT534307	hsa-miR-30b-5p	PAR-CLIP	22012620
MIRT534306	hsa-miR-30c-5p	PAR-CLIP	22012620
MIRT534305	hsa-miR-30d-5p	PAR-CLIP	22012620
MIRT534304	hsa-miR-30e-5p	PAR-CLIP	22012620
MIRT534303	hsa-miR-1260a	PAR-CLIP	22012620
MIRT534302	hsa-miR-1260b	PAR-CLIP	22012620
MIRT534301	hsa-miR-4713-5p	PAR-CLIP	22012620
MIRT534300	hsa-miR-6867-3p	PAR-CLIP	22012620
MIRT534299	hsa-miR-629-3p	PAR-CLIP	22012620
MIRT534298	hsa-miR-6892-3p	PAR-CLIP	22012620
MIRT708898	hsa-miR-1306-5p	HITS-CLIP	19536157
MIRT720978	hsa-miR-4284	HITS-CLIP	19536157
MIRT720977	hsa-miR-4437	HITS-CLIP	19536157
MIRT708897	hsa-miR-4777-3p	HITS-CLIP	19536157
MIRT708896	hsa-miR-5089-3p	HITS-CLIP	19536157
MIRT708898	hsa-miR-1306-5p	HITS-CLIP	19536157
MIRT708897	hsa-miR-4777-3p	HITS-CLIP	19536157
MIRT708896	hsa-miR-5089-3p	HITS-CLIP	19536157
MIRT708898	hsa-miR-1306-5p	HITS-CLIP	19536157
MIRT708897	hsa-miR-4777-3p	HITS-CLIP	19536157
MIRT708896	hsa-miR-5089-3p	HITS-CLIP	19536157
MIRT534318	hsa-miR-532-3p	PAR-CLIP	22012620
MIRT534317	hsa-miR-497-3p	PAR-CLIP	22012620
MIRT534316	hsa-miR-3145-5p	PAR-CLIP	22012620
MIRT534315	hsa-miR-508-5p	PAR-CLIP	22012620
MIRT534314	hsa-miR-4495	PAR-CLIP	22012620
MIRT534313	hsa-miR-1224-3p	PAR-CLIP	22012620
MIRT534312	hsa-miR-7108-3p	PAR-CLIP	22012620
MIRT534311	hsa-miR-5088-3p	PAR-CLIP	22012620
MIRT534310	hsa-miR-150-5p	PAR-CLIP	22012620
MIRT534309	hsa-miR-2116-3p	PAR-CLIP	22012620
MIRT534308	hsa-miR-30a-5p	PAR-CLIP	22012620
MIRT534307	hsa-miR-30b-5p	PAR-CLIP	22012620
MIRT534306	hsa-miR-30c-5p	PAR-CLIP	22012620
MIRT534305	hsa-miR-30d-5p	PAR-CLIP	22012620
MIRT534304	hsa-miR-30e-5p	PAR-CLIP	22012620
MIRT534303	hsa-miR-1260a	PAR-CLIP	22012620
MIRT534302	hsa-miR-1260b	PAR-CLIP	22012620
MIRT534301	hsa-miR-4713-5p	PAR-CLIP	22012620
MIRT534300	hsa-miR-6867-3p	PAR-CLIP	22012620
MIRT534299	hsa-miR-629-3p	PAR-CLIP	22012620
MIRT534298	hsa-miR-6892-3p	PAR-CLIP	22012620

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GO ID	Ontology	Definition	Evidence	Reference
GO:0003700	Function	DNA-binding transcription factor activity	NAS	34673265
GO:0006357	Process	Regulation of transcription by RNA polymerase II	NAS	34673265

MIM	HGNC	e!Ensembl
HGNC	N/A	HGNC

Q1XH10

Protein name

SKI/DACH domain-containing protein 1 (Protein DLN-1)

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF02437	Ski_Sno	5 → 97	SKI/SNO/DAC family	Family
PF15223	EPOP	475 → 906	Elongin BC and Polycomb repressive complex 2-associated protein	Family

Sequence

MGDLKSGFEEVDGVRLGYLIIKGKQMFALSQVFTDLLKNIPRTTVHKRMDHLKVKKHHCD
LEELRKLKAINSIAFHAAKCTLISREDVEALYTSCKTERVLKTKRRRVGRALATKAPPPE
RAAAASPRPGFWKDKHQLWRGLSGAARPLPISAQSQRPGAAAARPAAHLPQIFSKYPGSH
YPEIVRSPCKPPLNYETAPLQGNYVAFPSDPAYFRSLLCSKHPAAAAAAAAAAAAAAAAA
AAAAYYQVSAAGPQPKAAAGAGGPGSLSYRCKRKRGGAKDCLLAPHAGARRLLLLPRSYK
AKAAAAAAAAAAAAAAAAGATCLERFHLVNGFCPPPHHHHHHHHHHHHHHHRAQPPQQSH
HPPHHHRPQPHLGSFPESCSSDSESSSYSDHAANDSDFGSSLSSSSNSVSSEEEEEEGEE
EEEEEEEEGGSGASDSSEVSSEEEDSSTESDSSSGSSQVSVQSIRFRRTSFCKPPSVQAQ
ANFLYHLASAAAATKPAAFEDAGRLPDLKSSVKAESPAEWNLQSWAPKASPVYCPASLGS
CFAEIRNDRVSEITFPHSEISNAVKRTDLTINCLAEGASSPSPKTNNAFPQQRILREARK
CLQTTPTTHCADNNTIAARFLNNDSSGAEANSEKYSKILHCPEFATDLPSSQTDPEVNAA
GAAATKAENPCTDTGDKTLPFLHNIKIKVEDSSANEEYEPHLFTNKLKCECNDTKGEFYS
VTESKEEDALLTTAKEGFACPEKETPSLNPLAQSQGLSCTLGSPKPEDGEYKFGARVRKN
YRTLVLGKRPVLQTPPVKPNLKSARSPRPTGKTETNEGTLDDFTVINRRKKVASNVASAV
KRPFHFMANFPCPPSLIIGRDGDLWPAYSLNTTKDSQTPHKAHPIWKWQLGGSAIPLPPS
HKFRKFNS

Sequence length

908

Interactions

View interactions

Evidence Score: ★☆☆☆☆ Gene-disease association found in Text Mining only ★★☆☆☆ Found in Text Mining and Unknown/Other Associations ★★★☆☆ Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆ ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★ ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Show/Hide Unknown Diseases (13)

Phenotype Name	Clinical Significance	Source	Evidence Score
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
ASTHMA	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
BREAST CANCER	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
BREAST CARCINOMA	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
CHOLELITHIASIS	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
CORONARY ARTERY DISEASE	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
EBV-positive nodal T- and NK-cell lymphoma	Likely benign	ClinVar	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
GALLSTONES	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
GASTROESOPHAGEAL REFLUX DISEASE	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
HEART FAILURE	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
MORBID OBESITY	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
OSTEOARTHRITIS	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
SKIDA1-related disorder	Likely benign; Benign	ClinVar	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
UTERINE FIBROID	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations

SKIDA1 (SKI/DACH domain containing 1)