Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
3836
Gene name Gene Name - the full gene name approved by the HGNC.
Karyopherin subunit alpha 1
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
KPNA1
Synonyms (NCBI Gene) Gene synonyms aliases
IPOA5, NPI-1, RCH2, SRP1
Chromosome Chromosome number
3
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
3q21.1
Summary Summary of gene provided in NCBI Entrez Gene.
The transport of molecules between the nucleus and the cytoplasm in eukaryotic cells is mediated by the nuclear pore complex (NPC), which consists of 60-100 proteins. Small molecules (up to 70 kD) can pass through the nuclear pore by nonselective diffusio
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT025234 hsa-miR-34a-5p Proteomics 21566225
MIRT025234 hsa-miR-34a-5p Proteomics 21566225
MIRT027097 hsa-miR-103a-3p Sequencing 20371350
MIRT028495 hsa-miR-30a-5p Proteomics 18668040
MIRT031732 hsa-miR-16-5p Sequencing 20371350
Transcription factors
Transcription factor Regulation Reference
SRF Unknown 21131446
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000018 Process Regulation of DNA recombination TAS 8052633
GO:0005515 Function Protein binding IPI 10523667, 12011095, 15942031, 16713569, 17310249, 17596301, 18985028, 19084525, 19412186, 21385873, 21988832, 21994455, 22500989, 25416956, 25599645, 26420826, 26496610, 26966684, 29370303, 31515488, 32296183, 33060197
GO:0005634 Component Nucleus IBA 21873635
GO:0005634 Component Nucleus ISS
GO:0005643 Component Nuclear pore TAS 8052633
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
600686 6394 ENSG00000114030
Protein
UniProt ID P52294
Protein name Importin subunit alpha-5 (Karyopherin subunit alpha-1) (Nucleoprotein interactor 1) (NPI-1) (RAG cohort protein 2) (SRP1-beta) [Cleaved into: Importin subunit alpha-5, N-terminally processed]
Protein function Functions in nuclear protein import as an adapter protein for nuclear receptor KPNB1 (PubMed:27713473, PubMed:7892216, PubMed:8692858). Binds specifically and directly to substrates containing either a simple or bipartite NLS motif (PubMed:27713
PDB 2JDQ , 3TJ3 , 4B18 , 6WX9
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01749 IBB 10 104 Importin beta binding domain Family
PF00514 Arm 114 156 Armadillo/beta-catenin-like repeat Repeat
PF00514 Arm 158 198 Armadillo/beta-catenin-like repeat Repeat
PF00514 Arm 200 241 Armadillo/beta-catenin-like repeat Repeat
PF00514 Arm 243 283 Armadillo/beta-catenin-like repeat Repeat
PF00514 Arm 285 325 Armadillo/beta-catenin-like repeat Repeat
PF00514 Arm 327 367 Armadillo/beta-catenin-like repeat Repeat
PF00514 Arm 369 409 Armadillo/beta-catenin-like repeat Repeat
PF00514 Arm 412 452 Armadillo/beta-catenin-like repeat Repeat
PF16186 Arm_3 466 517 Atypical Arm repeat Family
Tissue specificity TISSUE SPECIFICITY: Expressed ubiquitously. {ECO:0000269|PubMed:7892216}.
Sequence
Sequence length 538
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Nucleocytoplasmic transport
Salmonella infection
Influenza A
Chemical carcinogenesis - receptor activation
  ISG15 antiviral mechanism
Apoptosis induced DNA fragmentation
Integration of provirus
Transport of Ribonucleoproteins into the Host Nucleus
NS1 Mediated Effects on Host Pathways
Vpr-mediated nuclear import of PICs
Inhibition of nitric oxide production
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Leukemia Leukemia, Myelocytic, Acute rs121909646, rs121913488, rs587776834, rs752746786, rs869312821, rs767454740, rs1554564297 27903959
Schizophrenia Schizophrenia rs13447324, rs387906932, rs387906933, rs863223354, rs863223355, rs776061422, rs863223349, rs748809996, rs759748655, rs863223353, rs863223350, rs863223356, rs781821239, rs863223348, rs863223346
View all (12 more)
21743468
Associations from Text Mining
Disease Name Relationship Type References
Arthritis Rheumatoid Associate 18719369
Bipolar Disorder Associate 18719369
Carcinoma Squamous Cell Associate 27060135
Crohn Disease Associate 18719369
Diabetes Mellitus Type 2 Associate 18719369
Inflammation Associate 29331583
Leukemia Promyelocytic Acute Associate 32036017
Neoplasms Associate 31152607, 34022224
Neoplasms Inhibit 35991835
Uterine Cervical Neoplasms Inhibit 35991835