Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
38
Gene name Gene Name - the full gene name approved by the HGNC.
Acetyl-CoA acetyltransferase 1
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
ACAT1
Synonyms (NCBI Gene) Gene synonyms aliases
ACAT, MAT, T2, THIL
Chromosome Chromosome number
11
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
11q22.3
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a mitochondrially localized enzyme that catalyzes the reversible formation of acetoacetyl-CoA from two molecules of acetyl-CoA. Defects in this gene are associated with 3-ketothiolase deficiency, an inborn error of isoleucine catabolism
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs77311724 G>C,T Conflicting-interpretations-of-pathogenicity Genic upstream transcript variant, 5 prime UTR variant, coding sequence variant, intron variant, synonymous variant, upstream transcript variant
rs120074140 G>A Likely-pathogenic Coding sequence variant, missense variant
rs120074141 G>A Likely-pathogenic Coding sequence variant, missense variant
rs120074142 T>A,C Pathogenic Upstream transcript variant, genic upstream transcript variant, intron variant, 5 prime UTR variant, initiator codon variant, missense variant
rs120074143 G>T Likely-pathogenic Coding sequence variant, missense variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT023466 hsa-miR-23b-3p Sequencing 20371350
MIRT030744 hsa-miR-21-5p Microarray 18591254
MIRT052670 hsa-miR-1260b CLASH 23622248
MIRT437469 hsa-miR-9-5p Luciferase reporter assay, qRT-PCR, Western blot 24028971
MIRT030744 hsa-miR-21-5p Western blotting, qRT-PCR, ELISA 34985712
Transcription factors
Transcription factor Regulation Reference
PPARG Activation 19049899
STAT1 Unknown 18000807
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0003985 Function Acetyl-CoA C-acetyltransferase activity IBA 21873635
GO:0003985 Function Acetyl-CoA C-acetyltransferase activity IDA 17371050
GO:0003985 Function Acetyl-CoA C-acetyltransferase activity IMP 1979337, 8103405
GO:0005739 Component Mitochondrion IBA 21873635
GO:0005739 Component Mitochondrion IDA 1979337
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
607809 93 ENSG00000075239
Protein
UniProt ID P24752
Protein name Acetyl-CoA acetyltransferase, mitochondrial (EC 2.3.1.9) (Acetoacetyl-CoA thiolase) (T2)
Protein function This is one of the enzymes that catalyzes the last step of the mitochondrial beta-oxidation pathway, an aerobic process breaking down fatty acids into acetyl-CoA (PubMed:1715688, PubMed:7728148, PubMed:9744475). Using free coenzyme A/CoA, cataly
PDB 2F2S , 2IB7 , 2IB8 , 2IB9 , 2IBU , 2IBW , 2IBY
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00108 Thiolase_N 42 299 Thiolase, N-terminal domain Domain
PF02803 Thiolase_C 306 426 Thiolase, C-terminal domain Domain
Sequence
Sequence length 427
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Fatty acid degradation
Valine, leucine and isoleucine degradation
Lysine degradation
Tryptophan metabolism
Pyruvate metabolism
Glyoxylate and dicarboxylate metabolism
Butanoate metabolism
Terpenoid backbone biosynthesis
Metabolic pathways
Carbon metabolism
Fatty acid metabolism
Fat digestion and absorption
  Branched-chain amino acid catabolism
Utilization of Ketone Bodies
Synthesis of Ketone Bodies
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Deficiency of acetyl-coa acetyltransferase Deficiency of acetyl-CoA acetyltransferase rs120074140, rs120074141, rs145229472, rs1280110907, rs120074142, rs120074143, rs120074144, rs387906282, rs387906283, rs120074145, rs120074146, rs120074147, rs148639841, rs398123096, rs398123097
View all (69 more)
11161836, 11914035, 17236799, 1346617, 7728148, 1715688, 1627655, 28220263, 21669895, 8103405, 2893809, 23430882, 24517888, 36452, 7749408
View all (11 more)
Hypertension Hypertensive disease rs13306026
Mental retardation Severe intellectual disability, Mild Mental Retardation, Intellectual Disability rs5742905, rs267607136, rs267607137, rs2131714307, rs267607038, rs267607042, rs80338685, rs137853127, rs80338815, rs28940893, rs387906309, rs121908096, rs121908099, rs587784365, rs121918315
View all (1024 more)
Seizure Complex partial seizures, Generalized seizures, Visual seizure, Tonic - clonic seizures, Single Seizure rs587784365, rs28939683, rs74315390, rs28939684, rs74315391, rs267607198, rs74315392, rs118192244, rs118192250, rs121917749, rs121917750, rs121917751, rs121917752, rs267606670, rs267607061
View all (179 more)
23266720
Associations from Text Mining
Disease Name Relationship Type References
Adenocarcinoma of Lung Associate 39323079
Alzheimer Disease Associate 17412327
Atherosclerosis Associate 11461099, 11529503, 16474185, 19189937, 24028971
Atrial Fibrillation Associate 31894294
Beta ketothiolase deficiency Associate 1362011, 20046049, 29624230, 34001203, 40598206
Beta ketothiolase deficiency Inhibit 1979337
Carcinoma Hepatocellular Associate 33865459, 33990561, 37957550
Carcinoma Ovarian Epithelial Associate 35399074
Carcinoma Renal Cell Associate 25315187, 38297313
Cerebral Infarction Associate 24577316