Gene Gene information from NCBI Gene database.
Entrez ID 3766
Gene name Potassium inwardly rectifying channel subfamily J member 10
Gene symbol KCNJ10
Synonyms (NCBI Gene)
BIRK-10KCNJ13-PENKIR1.2KIR4.1SESAME
Chromosome 1
Chromosome location 1q23.2
Summary This gene encodes a member of the inward rectifier-type potassium channel family, characterized by having a greater tendency to allow potassium to flow into, rather than out of, a cell. The encoded protein may form a heterodimer with another potassium cha
SNPs SNP information provided by dbSNP.
24
SNP ID Visualize variation Clinical significance Consequence
rs137853066 C>G,T Pathogenic Missense variant, coding sequence variant
rs137853067 G>A Pathogenic Stop gained, coding sequence variant
rs137853068 A>G Pathogenic Missense variant, coding sequence variant
rs137853069 G>A Pathogenic Missense variant, coding sequence variant
rs137853070 G>A Pathogenic Missense variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
213
miRTarBase ID miRNA Experiments Reference
MIRT438674 hsa-miR-205-5p Luciferase reporter assayqRT-PCRWestern blot 23950153
MIRT438674 hsa-miR-205-5p Luciferase reporter assayqRT-PCRWestern blot 23950153
MIRT722465 hsa-miR-8087 HITS-CLIP 19536157
MIRT722464 hsa-miR-6887-3p HITS-CLIP 19536157
MIRT722463 hsa-miR-6795-3p HITS-CLIP 19536157
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
43
GO ID Ontology Definition Evidence Reference
GO:0000166 Function Nucleotide binding IEA
GO:0005242 Function Inward rectifier potassium channel activity IBA
GO:0005242 Function Inward rectifier potassium channel activity IEA
GO:0005242 Function Inward rectifier potassium channel activity IMP 20651251
GO:0005267 Function Potassium channel activity IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
602208 6256 ENSG00000177807
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P78508
Protein name ATP-sensitive inward rectifier potassium channel 10 (ATP-dependent inwardly rectifying potassium channel Kir4.1) (Inward rectifier K(+) channel Kir1.2) (Potassium channel, inwardly rectifying subfamily J member 10)
Protein function May be responsible for potassium buffering action of glial cells in the brain (By similarity). Inward rectifier potassium channels are characterized by a greater tendency to allow potassium to flow into the cell rather than out of it (PubMed:899
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01007 IRK 31 172 Inward rectifier potassium channel transmembrane domain Domain
PF17655 IRK_C 179 350 Inward rectifier potassium channel C-terminal domain Domain
Tissue specificity TISSUE SPECIFICITY: Expressed in kidney (at protein level) (PubMed:24561201). In the nephron, expressed in the distal convoluted tubule, the connecting tubule, the collecting duct and cortical thick ascending limbs (PubMed:20651251). {ECO:0000269|PubMed:2
Sequence
Sequence length 379
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Gastric acid secretion
Huntington disease
  Activation of G protein gated Potassium channels
Potassium transport channels
Inhibition of voltage gated Ca2+ channels via Gbeta/gamma subunits
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
606
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Abnormality of the nervous system Likely pathogenic rs1571265375 RCV001836909
Autosomal recessive nonsyndromic hearing loss 4 Likely pathogenic; Pathogenic rs137853067, rs137853070, rs137853071, rs137853073 RCV002496303
RCV001536078
RCV002490337
RCV000007895
Bilateral sensorineural hearing impairment Pathogenic rs137853066 RCV001003572
Cerebellar ataxia Pathogenic rs137853066 RCV001003572
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Autism Conflicting classifications of pathogenicity rs115466046 RCV001258301
Hearing loss, autosomal recessive Conflicting classifications of pathogenicity rs142596580 RCV004577730
Intellectual disability Conflicting classifications of pathogenicity rs115466046, rs146396982, rs373899425 RCV001258301
RCV001252025
RCV001252024
KCNJ10-related disorder Likely benign; Conflicting classifications of pathogenicity; Benign; Uncertain significance rs200522826, rs115466046, rs372841245, rs145947380, rs146426296, rs149615470, rs137853074, rs141553756, rs142228240, rs144495959, rs1314505994, rs750246232, rs775091787, rs774758209 RCV004542841
RCV004724811
RCV004532514
RCV004537388
RCV004539742
RCV004537578
RCV000784954
RCV004541386
RCV004732827
RCV004544736
RCV005863174
RCV004538029
RCV004544783
RCV004544875
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
AA amyloidosis Stimulate 39603277
Alzheimer Disease Associate 39603277
Arrhythmias Cardiac Associate 27182706
Ataxia Associate 21300747, 23924083
Autism Spectrum Disorder Associate 31722434
Autistic Disorder Associate 31722434
Brain Neoplasms Associate 28445150
Cardiomyopathies Associate 27182706
Chorea Associate 31722434
Congenital Hyperinsulinism Associate 23869231