Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
3766
Gene name Gene Name - the full gene name approved by the HGNC.
Potassium inwardly rectifying channel subfamily J member 10
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
KCNJ10
Synonyms (NCBI Gene) Gene synonyms aliases
BIRK-10, KCNJ13-PEN, KIR1.2, KIR4.1, SESAME
Chromosome Chromosome number
1
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
1q23.2
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a member of the inward rectifier-type potassium channel family, characterized by having a greater tendency to allow potassium to flow into, rather than out of, a cell. The encoded protein may form a heterodimer with another potassium cha
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs137853066 C>G,T Pathogenic Missense variant, coding sequence variant
rs137853067 G>A Pathogenic Stop gained, coding sequence variant
rs137853068 A>G Pathogenic Missense variant, coding sequence variant
rs137853069 G>A Pathogenic Missense variant, coding sequence variant
rs137853070 G>A Pathogenic Missense variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT438674 hsa-miR-205-5p Luciferase reporter assay, qRT-PCR, Western blot 23950153
MIRT438674 hsa-miR-205-5p Luciferase reporter assay, qRT-PCR, Western blot 23950153
MIRT722465 hsa-miR-8087 HITS-CLIP 19536157
MIRT722464 hsa-miR-6887-3p HITS-CLIP 19536157
MIRT722463 hsa-miR-6795-3p HITS-CLIP 19536157
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000166 Function Nucleotide binding IEA
GO:0005242 Function Inward rectifier potassium channel activity IBA
GO:0005242 Function Inward rectifier potassium channel activity IEA
GO:0005242 Function Inward rectifier potassium channel activity IMP 20651251
GO:0005267 Function Potassium channel activity IEA
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
602208 6256 ENSG00000177807
Protein
UniProt ID P78508
Protein name ATP-sensitive inward rectifier potassium channel 10 (ATP-dependent inwardly rectifying potassium channel Kir4.1) (Inward rectifier K(+) channel Kir1.2) (Potassium channel, inwardly rectifying subfamily J member 10)
Protein function May be responsible for potassium buffering action of glial cells in the brain (By similarity). Inward rectifier potassium channels are characterized by a greater tendency to allow potassium to flow into the cell rather than out of it (PubMed:899
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01007 IRK 31 172 Inward rectifier potassium channel transmembrane domain Domain
PF17655 IRK_C 179 350 Inward rectifier potassium channel C-terminal domain Domain
Tissue specificity TISSUE SPECIFICITY: Expressed in kidney (at protein level) (PubMed:24561201). In the nephron, expressed in the distal convoluted tubule, the connecting tubule, the collecting duct and cortical thick ascending limbs (PubMed:20651251). {ECO:0000269|PubMed:2
Sequence
Sequence length 379
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Gastric acid secretion
Huntington disease
  Activation of G protein gated Potassium channels
Potassium transport channels
Inhibition of voltage gated Ca2+ channels via Gbeta/gamma subunits
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Associated diseases Disease associations categorized as Causal (pathogenic variants), Unknown (uncertain genetic evidence), or Text Mining (literature-based associations)
Causal Diseases caused by PATHOGENIC or LIKELY PATHOGENIC variants from ClinVar only
Disease merge term Disease name dbSNP ID References
Deafness Autosomal recessive nonsyndromic hearing loss 4 rs137853073 N/A
EAST Syndrome east syndrome rs387906834, rs757159382, rs1557967748, rs137853066, rs1648624751, rs137853067, rs137853068, rs137853069, rs137853070, rs137853071, rs137853072 N/A
Unknown Includes: (1) ClinVar NON-pathogenic variants (Uncertain, Benign, Conflicting, VUS), (2) GenCC associations, (3) GWAS associations, (4) CBGDA evidence-based associations. NOTE: Diseases with pathogenic evidence are excluded to avoid conflicts.
Disease merge term Disease name Evidence References Source
Hearing Loss Hearing loss, autosomal recessive N/A N/A ClinVar
Mental retardation intellectual disability N/A N/A ClinVar
Nonsyndromic Deafness Nonsyndromic Hearing Loss, Mixed N/A N/A ClinVar
Pendred Syndrome pendred syndrome, Pendred syndrome N/A N/A ClinVar, GenCC
Associations from Text Mining Disease associations identified through Pubtator
Disease Name Relationship Type References
AA amyloidosis Stimulate 39603277
Alzheimer Disease Associate 39603277
Arrhythmias Cardiac Associate 27182706
Ataxia Associate 21300747, 23924083
Autism Spectrum Disorder Associate 31722434
Autistic Disorder Associate 31722434
Brain Neoplasms Associate 28445150
Cardiomyopathies Associate 27182706
Chorea Associate 31722434
Congenital Hyperinsulinism Associate 23869231