Gene Gene information from NCBI Gene database.
Entrez ID 3687
Gene name Integrin subunit alpha X
Gene symbol ITGAX
Synonyms (NCBI Gene)
CD11CSLEB6
Chromosome 16
Chromosome location 16p11.2
Summary This gene encodes the integrin alpha X chain protein. Integrins are heterodimeric integral membrane proteins composed of an alpha chain and a beta chain. This protein combines with the beta 2 chain (ITGB2) to form a leukocyte-specific integrin referred to
miRNA miRNA information provided by mirtarbase database.
86
miRTarBase ID miRNA Experiments Reference
MIRT030204 hsa-miR-26b-5p Microarray 19088304
MIRT1073963 hsa-miR-1262 CLIP-seq
MIRT1073964 hsa-miR-2114 CLIP-seq
MIRT1073965 hsa-miR-25 CLIP-seq
MIRT1073966 hsa-miR-32 CLIP-seq
Transcription factors Transcription factors information provided by TRRUST V2 database.
8
Transcription factor Regulation Reference
CEBPA Activation 9360988
JUN Unknown 8649405;8649434
NFKB1 Unknown 7678251
RELA Unknown 7678251
SP1 Unknown 7678251;8649405
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
45
GO ID Ontology Definition Evidence Reference
GO:0005178 Function Integrin binding TAS 8020569
GO:0005515 Function Protein binding IPI 17726152, 20033057, 20679211
GO:0005886 Component Plasma membrane TAS
GO:0007155 Process Cell adhesion IEA
GO:0007155 Process Cell adhesion TAS 2303426
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
151510 6152 ENSG00000140678
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P20702
Protein name Integrin alpha-X (CD11 antigen-like family member C) (Leu M5) (Leukocyte adhesion glycoprotein p150,95 alpha chain) (Leukocyte adhesion receptor p150,95) (CD antigen CD11c)
Protein function Integrin alpha-X/beta-2 is a receptor for fibrinogen. It recognizes the sequence G-P-R in fibrinogen. It mediates cell-cell interaction during inflammatory responses. It is especially important in monocyte adhesion and chemotaxis.
PDB 1N3Y , 2LUV , 3K6S , 3K71 , 3K72 , 4NEH , 4NEN , 5ES4
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00092 VWA 151 328 von Willebrand factor type A domain Domain
PF01839 FG-GAP 458 495 FG-GAP repeat Repeat
PF01839 FG-GAP 521 556 FG-GAP repeat Repeat
PF08441 Integrin_alpha2 615 1015 Integrin alpha Family
PF00357 Integrin_alpha 1129 1143 Integrin alpha cytoplasmic region Family
Tissue specificity TISSUE SPECIFICITY: Predominantly expressed in monocytes and granulocytes.
Sequence
MTRTRAALLLFTALATSLGFNLDTEELTAFRVDSAGFGDSVVQYANSWVVVGAPQKITAA
NQTGGLYQCGYSTGACEPIGLQVPPEAVNMSLGLSLASTTSPSQLLACGPTVHHECGRNM
YLTGLCFLLGPTQLTQRLPVSRQECPRQEQDIVFLIDGSGSISSRNFATMMNFVRAVISQ
FQRPSTQFSLMQFSNKFQTHFTFEEFRRSSNPLSLLASVHQLQGFTYTATAIQNVVHRLF
HASYGARRDAAKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKE
LNDIASKPSQEHIFKVEDFDALKDIQNQ
LKEKIFAIEGTETTSSSSFELEMAQEGFSAVF
TPDGPVLGAVGSFTWSGGAFLYPPNMSPTFINMSQENVDMRDSYLGYSTELALWKGVQSL
VLGAPRYQHTGKAVIFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGA
PHYYEQTRGGQVSVC
PLPRGWRRWWCDAVLYGEQGHPWGRFGAALTVLGDVNGDKLTDVV
IGAPGEEENRGAVYLF
HGVLGPSISPSHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGLV
DLAVGARGQVLLLRTRPVLWVGVSMQFIPAEIPRSAFECREQVVSEQTLVQSNICLYIDK
RSKNLLGSRDLQSSVTLDLALDPGRLSPRATFQETKNRSLSRVRVLGLKAHCENFNLLLP
SCVEDSVTPITLRLNFTLVGKPLLAFRNLRPMLAADAQRYFTASLPFEKNCGADHICQDN
LGISFSFPGLKSLLVGSNLELNAEVMVWNDGEDSYGTTITFSHPAGLSYRYVAEGQKQGQ
LRSLHLTCDSAPVGSQGTWSTSCRINHLIFRGGAQITFLATFDVSPKAVLGDRLLLTANV
SSENNTPRTSKTTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQVNNL
GQRDLPVSINFWVPVELNQEAVWMDVEVSHPQNPSLRCSSEKIAPPASDFLAHIQ
KNPVL
DCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKVSVVSVAEITFDTSVYS
QLPGQEAFMRAQTTTVLEKYKVHNPTPLIVGSSIGGLLLLALITAVLYKVGFFKRQYKEM
MEE
ANGQIAPENGTQTPSPPSEK
Sequence length 1163
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Complement and coagulation cascades
Regulation of actin cytoskeleton
Tuberculosis
  Cell surface interactions at the vascular wall
Integrin cell surface interactions
ECM proteoglycans
Interleukin-4 and Interleukin-13 signaling
Neutrophil degranulation
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
5
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
ALZHEIMER DISEASE GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
IGA GLOMERULONEPHRITIS GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
LEUKEMIA, PROMYELOCYTIC, ACUTE CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
SYSTEMIC LUPUS ERYTHEMATOSUS GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References Evidence Score
Acrodermatitis Associate 17324275
★☆☆☆☆
Found in Text Mining only
Acute On Chronic Liver Failure Associate 36505417
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma of Lung Associate 33461176
★☆☆☆☆
Found in Text Mining only
Allergic Fungal Sinusitis Associate 25361058
★☆☆☆☆
Found in Text Mining only
Alzheimer Disease Associate 40465637
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Arthritis Rheumatoid Associate 12417058, 18727628, 31061532, 32824307, 39346909, 39925810
★☆☆☆☆
Found in Text Mining only
Arthritis Rheumatoid Stimulate 28376277, 31882654
★☆☆☆☆
Found in Text Mining only
Ascites Associate 17094388
★☆☆☆☆
Found in Text Mining only
Asthma Associate 25420684
★☆☆☆☆
Found in Text Mining only
Atherosclerosis Associate 19800635, 21030716, 23918401, 32824307, 35287505
★☆☆☆☆
Found in Text Mining only