Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
3678
Gene name Gene Name - the full gene name approved by the HGNC.
Integrin subunit alpha 5
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
ITGA5
Synonyms (NCBI Gene) Gene synonyms aliases
CD49e, FNRA, VLA-5, VLA5A
Chromosome Chromosome number
12
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
12q13.13
Summary Summary of gene provided in NCBI Entrez Gene.
The product of this gene belongs to the integrin alpha chain family. Integrins are heterodimeric integral membrane proteins composed of an alpha subunit and a beta subunit that function in cell surface adhesion and signaling. The encoded preproprotein is
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT003031 hsa-miR-92a-3p Luciferase reporter assay, Western blot, Microarray 19460962
MIRT004976 hsa-miR-31-5p Luciferase reporter assay, qRT-PCR, Western blot 19524507
MIRT004976 hsa-miR-31-5p Luciferase reporter assay, qRT-PCR, Western blot 19524507
MIRT007314 hsa-miR-148b-3p Western blot 23238785
MIRT007314 hsa-miR-148b-3p Western blot 23238785
Transcription factors
Transcription factor Regulation Reference
HOXD3 Unknown 14610084
NFIC Repression 18775869
PAX6 Unknown 10954416
SP1 Activation 18775869
ZEB2 Activation 22227038
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0001525 Process Angiogenesis IBA
GO:0001525 Process Angiogenesis TAS 19267251
GO:0001618 Function Virus receptor activity IEA
GO:0001704 Process Formation of primary germ layer IEA
GO:0001726 Component Ruffle TAS 11919189
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
135620 6141 ENSG00000161638
Protein
UniProt ID P08648
Protein name Integrin alpha-5 (CD49 antigen-like family member E) (Fibronectin receptor subunit alpha) (Integrin alpha-F) (VLA-5) (CD antigen CD49e) [Cleaved into: Integrin alpha-5 heavy chain; Integrin alpha-5 light chain]
Protein function Integrin alpha-5/beta-1 (ITGA5:ITGB1) is a receptor for fibronectin and fibrinogen. It recognizes the sequence R-G-D in its ligands. ITGA5:ITGB1 binds to PLA2G2A via a site (site 2) which is distinct from the classical ligand-binding site (site
PDB 3VI3 , 3VI4 , 4WJK , 4WK0 , 4WK2 , 4WK4 , 7NWL , 7NXD , 9B9J , 9B9K , 9CKV
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01839 FG-GAP 326 368 FG-GAP repeat Repeat
PF01839 FG-GAP 392 428 FG-GAP repeat Repeat
PF08441 Integrin_alpha2 489 921 Integrin alpha Family
Tissue specificity TISSUE SPECIFICITY: Expressed in placenta (at protein level). {ECO:0000269|PubMed:33962943}.
Sequence
MGSRTPESPLHAVQLRWGPRRRPPLLPLLLLLLPPPPRVGGFNLDAEAPAVLSGPPGSFF
GFSVEFYRPGTDGVSVLVGAPKANTSQPGVLQGGAVYLCPWGASPTQCTPIEFDSKGSRL
LESSLSSSEGEEPVEYKSLQWFGATVRAHGSSILACAPLYSWRTEKEPLSDPVGTCYLST
DNFTRILEYAPCRSDFSWAAGQGYCQGGFSAEFTKTGRVVLGGPGSYFWQGQILSATQEQ
IAESYYPEYLINLVQGQLQTRQASSIYDDSYLGYSVAVGEFSGDDTEDFVAGVPKGNLTY
GYVTILNGSDIRSLYNFSGEQMASYFGYAVAATDVNGDGLDDLLVGAPLLMDRTPDGRPQ
EVGRVYVY
LQHPAGIEPTPTLTLTGHDEFGRFGSSLTPLGDLDQDGYNDVAIGAPFGGET
QQGVVFVF
PGGPGGLGSKPSQVLQPLWAASHTPDFFGSALRGGRDLDGNGYPDLIVGSFG
VDKAVVYRGRPIVSASASLTIFPAMFNPEERSCSLEGNPVACINLSFCLNASGKHVADSI
GFTVELQLDWQKQKGGVRRALFLASRQATLTQTLLIQNGAREDCREMKIYLRNESEFRDK
LSPIHIALNFSLDPQAPVDSHGLRPALHYQSKSRIEDKAQILLDCGEDNICVPDLQLEVF
GEQNHVYLGDKNALNLTFHAQNVGEGGAYEAELRVTAPPEAEYSGLVRHPGNFSSLSCDY
FAVNQSRLLVCDLGNPMKAGASLWGGLRFTVPHLRDTKKTIQFDFQILSKNLNNSQSDVV
SFRLSVEAQAQVTLNGVSKPEAVLFPVSDWHPRDQPQKEEDLGPAVHHVYELINQGPSSI
SQGVLELSCPQALEGQQLLYVTRVTGLNCTTNHPINPKGLELDPEGSLHHQQKREAPSRS
SASSGPQILKCPEAECFRLRC
ELGPLHQQESQSLQLHFRVWAKTFLQREHQPFSLQCEAV
YKALKMPYRILPRQLPQKERQVATAVQWTKAEGSYGVPLWIIILAILFGLLLLGLLIYIL
YKLGFFKRSLPYGTAMEKAQLKPPATSDA
Sequence length 1049
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Virion - Herpesvirus
Phagosome
PI3K-Akt signaling pathway
Focal adhesion
ECM-receptor interaction
Hematopoietic cell lineage
Regulation of actin cytoskeleton
Cytoskeleton in muscle cells
Bacterial invasion of epithelial cells
Shigellosis
Pertussis
Yersinia infection
Human papillomavirus infection
Herpes simplex virus 1 infection
Proteoglycans in cancer
MicroRNAs in cancer
Hypertrophic cardiomyopathy
Arrhythmogenic right ventricular cardiomyopathy
Dilated cardiomyopathy
  Elastic fibre formation
Fibronectin matrix formation
Cell surface interactions at the vascular wall
Integrin cell surface interactions
Signal transduction by L1
RUNX2 regulates genes involved in cell migration
<